cdmlib.git
10 years agorename getByIdInVocabulary
Andreas Müller [Wed, 9 Jul 2014 16:33:39 +0000 (16:33 +0000)]
rename getByIdInVocabulary

10 years agoremoved 2.6.9 reference
Cherian Mathew [Wed, 9 Jul 2014 15:24:09 +0000 (15:24 +0000)]
removed 2.6.9 reference

10 years agorename getByIdInVocabulary
Andreas Müller [Wed, 9 Jul 2014 15:14:38 +0000 (15:14 +0000)]
rename getByIdInVocabulary

10 years agorename getByIdInVocabulary
Andreas Müller [Wed, 9 Jul 2014 15:13:01 +0000 (15:13 +0000)]
rename getByIdInVocabulary

10 years agomove MockCdmCacher to TermLoader
Andreas Müller [Wed, 9 Jul 2014 14:39:51 +0000 (14:39 +0000)]
move MockCdmCacher to TermLoader

10 years agoremove (bot.) for name creation in botanical names of rank section #4122 and #4279
Andreas Müller [Wed, 9 Jul 2014 13:41:54 +0000 (13:41 +0000)]
remove (bot.) for name creation in botanical names of rank section   #4122 and #4279

10 years agofix failing single model test due to new MockCdmCacher
Andreas Müller [Wed, 9 Jul 2014 13:19:11 +0000 (13:19 +0000)]
fix failing single model test due to new MockCdmCacher

10 years agouse E+M areas in BM import and Pesi export
Andreas Müller [Tue, 8 Jul 2014 17:31:24 +0000 (17:31 +0000)]
use E+M areas in BM import and Pesi export

10 years ago[maven-release-plugin] prepare for next development iteration
edit-jenkins [Tue, 8 Jul 2014 09:39:19 +0000 (09:39 +0000)]
[maven-release-plugin] prepare for next development iteration

10 years ago[maven-release-plugin] prepare release cdmlib-parent-3.3.6 root/tags/cdmlib/cdmlib-parent-3.3.6 cdmlib-parent-3.3.6
edit-jenkins [Tue, 8 Jul 2014 09:39:15 +0000 (09:39 +0000)]
[maven-release-plugin] prepare release cdmlib-parent-3.3.6

10 years agominor
Andreas Müller [Tue, 8 Jul 2014 08:19:13 +0000 (08:19 +0000)]
minor

10 years agoimplementation for #4268 (allow defining custom presence and absence term colors...
Andreas Kohlbecker [Tue, 8 Jul 2014 05:02:12 +0000 (05:02 +0000)]
implementation for #4268 (allow defining custom presence and absence term colors for EditGeoServiceUtilities) and removing obsolete termservice parameters

10 years agominor
Andreas Müller [Fri, 4 Jul 2014 23:33:55 +0000 (23:33 +0000)]
minor

10 years agofixing NPE in DescriptionListController
Andreas Kohlbecker [Fri, 4 Jul 2014 13:13:13 +0000 (13:13 +0000)]
fixing NPE in DescriptionListController

10 years agoadding nameCache of NonViralNames to responses of rest services
Andreas Kohlbecker [Thu, 3 Jul 2014 16:05:46 +0000 (16:05 +0000)]
adding nameCache of NonViralNames to responses of rest services

10 years ago - removed unused query method
Patric Plitzner [Thu, 3 Jul 2014 08:34:57 +0000 (08:34 +0000)]
 - removed unused query method
 - removed default access point
 - adapted test

10 years agominor
Andreas Müller [Wed, 2 Jul 2014 16:23:59 +0000 (16:23 +0000)]
minor

10 years agofix for last commit
Andreas Müller [Wed, 2 Jul 2014 16:10:44 +0000 (16:10 +0000)]
fix for last commit

10 years agoreverting temp fix made for https://dev.e-taxonomy.eu/trac/ticket/2707#comment:24...
Andreas Kohlbecker [Wed, 2 Jul 2014 15:58:10 +0000 (15:58 +0000)]
reverting temp fix made for https://dev.e-taxonomy.eu/trac/ticket/2707#comment:24 by configuration in EditGeoServiceUtilities - but leaving code for now

10 years agocreate new vocabulary for MediaSpecimenKindOfUnit, move Detail image and Specimen...
Andreas Müller [Wed, 2 Jul 2014 15:57:20 +0000 (15:57 +0000)]
create new vocabulary for MediaSpecimenKindOfUnit, move Detail image and Specimen scan from old to new vocabulary and create new terms Living plant photo and Artwork  #4269

10 years agofixing #4278 for FeatureNode
Andreas Müller [Wed, 2 Jul 2014 14:16:13 +0000 (14:16 +0000)]
fixing #4278 for FeatureNode

10 years agofixing #4278 for PolytomousKeys
Andreas Müller [Wed, 2 Jul 2014 14:11:26 +0000 (14:11 +0000)]
fixing #4278 for PolytomousKeys

10 years agoadditional test for sortindex handling #4200
Andreas Müller [Wed, 2 Jul 2014 13:43:03 +0000 (13:43 +0000)]
additional test for sortindex handling #4200

10 years agoalternative for protected: deproxy #4200
Andreas Müller [Wed, 2 Jul 2014 13:42:05 +0000 (13:42 +0000)]
alternative for protected: deproxy  #4200

10 years agominor
Andreas Müller [Wed, 2 Jul 2014 13:21:33 +0000 (13:21 +0000)]
minor

10 years agotest for #4200
Andreas Müller [Wed, 2 Jul 2014 13:19:14 +0000 (13:19 +0000)]
test for #4200

10 years agocleaning up TaxonNode class and also refactoring solution for #4200
Andreas Müller [Wed, 2 Jul 2014 13:17:43 +0000 (13:17 +0000)]
cleaning up TaxonNode class and also refactoring solution for #4200

10 years agofixing sortindex issue #4200
Andreas Müller [Wed, 2 Jul 2014 08:46:05 +0000 (08:46 +0000)]
fixing sortindex issue #4200

10 years agominor
Andreas Müller [Wed, 2 Jul 2014 08:45:38 +0000 (08:45 +0000)]
minor

10 years agominor
Andreas Müller [Tue, 1 Jul 2014 13:14:41 +0000 (13:14 +0000)]
minor

10 years agoremoved 2.6.9 api
Cherian Mathew [Tue, 1 Jul 2014 10:32:45 +0000 (10:32 +0000)]
removed 2.6.9 api

10 years agoupdated javadoc
Cherian Mathew [Tue, 1 Jul 2014 09:33:40 +0000 (09:33 +0000)]
updated javadoc

10 years agoadd doc / comments
Cherian Mathew [Tue, 1 Jul 2014 09:30:24 +0000 (09:30 +0000)]
add doc / comments

10 years agoconvenience access for new kindOfUnit uuids #4269
Andreas Müller [Mon, 30 Jun 2014 16:04:53 +0000 (16:04 +0000)]
convenience access for new kindOfUnit uuids  #4269

10 years agoadd detail image and specimen scan to kindOfUnit vocabulary #4269
Andreas Müller [Mon, 30 Jun 2014 15:59:02 +0000 (15:59 +0000)]
add detail image and specimen scan to kindOfUnit vocabulary  #4269

10 years agoadded comment for null values
Cherian Mathew [Fri, 27 Jun 2014 09:49:37 +0000 (09:49 +0000)]
added comment for null values

10 years agoIService, ServiceBase : added method findWithoutFlush
Cherian Mathew [Thu, 26 Jun 2014 15:03:58 +0000 (15:03 +0000)]
IService, ServiceBase : added method findWithoutFlush
CdmCacher, CdmDaoCacher : split CdmCacher class to sub class which uses dao to access the data
MockCdmCacher : added mock cdm cacher for tests
TaxonNodeServiceImplTest, FeatureNodeServiceImplTest : removed duplicate @SpringApplicationContext annotation
IdentifiableServiceBaseTest, TaxonServiceSearchTest : reverted @Ignore on failing tests
TaxonServiceSearchTest : added mock cdm cacher
SecurityTest : removed duplicate PlatformTransactionManager autowiring
CdmCacherTest : extended test

10 years agoadded comment for mock cdm cacher
Cherian Mathew [Thu, 26 Jun 2014 14:57:49 +0000 (14:57 +0000)]
added comment for mock cdm cacher

10 years agoadded findByUuidWithoutFlush method
Cherian Mathew [Thu, 26 Jun 2014 13:49:53 +0000 (13:49 +0000)]
added findByUuidWithoutFlush method

10 years agoremoved ehcache-2.6.9 api for now
Cherian Mathew [Wed, 25 Jun 2014 17:57:41 +0000 (17:57 +0000)]
removed ehcache-2.6.9 api for now

10 years agotemporarily ignoring failing tests to ensure compilation (see ticket 4276)
Cherian Mathew [Wed, 25 Jun 2014 17:20:32 +0000 (17:20 +0000)]
temporarily ignoring failing tests to ensure compilation (see ticket 4276)

10 years agoadded ehcache dependency
Cherian Mathew [Wed, 25 Jun 2014 16:25:05 +0000 (16:25 +0000)]
added ehcache dependency

10 years agoMockCdmCacher : added mock cdm cacher for tests in cdmlib-model
Cherian Mathew [Wed, 25 Jun 2014 16:18:34 +0000 (16:18 +0000)]
MockCdmCacher : added mock cdm cacher for tests in cdmlib-model
IdentifiableEntityTest : using mock cdm cacher in tests

10 years agoadded cdm cache for bean initialisation
Cherian Mathew [Wed, 25 Jun 2014 15:46:28 +0000 (15:46 +0000)]
added cdm cache for bean initialisation

10 years agoadding initial basic tests for cdm caching api
Cherian Mathew [Wed, 25 Jun 2014 14:48:43 +0000 (14:48 +0000)]
adding initial basic tests for cdm caching api

10 years agofixing #4273 (java.lang.ClassCastException in TaxonDaoHibernateImpl.countTaxaByCommo...
Andreas Kohlbecker [Wed, 25 Jun 2014 14:42:30 +0000 (14:42 +0000)]
fixing  #4273 (java.lang.ClassCastException in TaxonDaoHibernateImpl.countTaxaByCommonName() breaks taxon search) and most probably also other CommonName search related tickets

10 years agoclean up
Cherian Mathew [Wed, 25 Jun 2014 14:33:14 +0000 (14:33 +0000)]
clean up

10 years agoFirst commit for the CDM Caching api
Cherian Mathew [Wed, 25 Jun 2014 14:32:23 +0000 (14:32 +0000)]
First commit for the CDM Caching api
ICdmCacher, CdmCacher : CDM Cache class based on Ehcache
defaultApplicationContext.xml : added cache package to be component scanned
DefinedTermBase : new set/getCdmCacher method to make cacher available to term classes
Language : added methods which use the cache to load language terms
Rank : corrected default language call to use the new method
pom.xml : added ehcache dependency

10 years agomerged query call into one method to free connection resources
Cherian Mathew [Wed, 25 Jun 2014 14:21:53 +0000 (14:21 +0000)]
merged query call into one method to free connection resources

10 years agoremove some non-Javadocs
Andreas Müller [Wed, 25 Jun 2014 09:53:11 +0000 (09:53 +0000)]
remove some non-Javadocs

10 years agoauthentication for JAXB import
Andreas Müller [Wed, 25 Jun 2014 09:52:36 +0000 (09:52 +0000)]
authentication for JAXB import

10 years agoremove some comments and non-Javadocs
Andreas Müller [Wed, 25 Jun 2014 09:51:36 +0000 (09:51 +0000)]
remove some comments and non-Javadocs

10 years agofirst development for the export filter
Andreas Müller [Wed, 25 Jun 2014 09:49:06 +0000 (09:49 +0000)]
first development for the export filter

10 years agosolving probelms with the HttpStatusMessage class and potentially fixing a problem...
Andreas Kohlbecker [Mon, 23 Jun 2014 11:50:31 +0000 (11:50 +0000)]
solving probelms with the HttpStatusMessage class and potentially fixing a problem for palmweb with the image metadata display

10 years agominor
Andreas Müller [Mon, 23 Jun 2014 11:15:01 +0000 (11:15 +0000)]
minor

10 years agominor
Andreas Müller [Mon, 23 Jun 2014 11:14:22 +0000 (11:14 +0000)]
minor

10 years agominor changes mostly javadoc oder remove commented code
Andreas Müller [Mon, 23 Jun 2014 10:02:59 +0000 (10:02 +0000)]
minor changes mostly javadoc oder remove commented code

10 years agopreliminar solution to avoid problems due to #4263 (GeoServiceArea and IGeoServiceAre...
Andreas Kohlbecker [Thu, 19 Jun 2014 06:48:53 +0000 (06:48 +0000)]
preliminar solution to avoid problems due to #4263 (GeoServiceArea and IGeoServiceAreaMapping should manage mapping information per layer)

10 years agojavadoc
Andreas Müller [Wed, 18 Jun 2014 15:53:23 +0000 (15:53 +0000)]
javadoc

10 years ago - fixed drag&drop for media
Patric Plitzner [Wed, 18 Jun 2014 07:02:12 +0000 (07:02 +0000)]
 - fixed drag&drop for media

10 years ago - added functionality to filter assigned specimens in the DerivateSearchView (fixes...
Patric Plitzner [Mon, 16 Jun 2014 08:57:24 +0000 (08:57 +0000)]
 - added functionality to filter assigned specimens in the DerivateSearchView (fixes #4252)

10 years agofixing failing security test due to stricter handling of correct sort index
Andreas Müller [Sun, 15 Jun 2014 10:09:54 +0000 (10:09 +0000)]
fixing failing security test due to stricter handling of correct sort index

10 years agominor
Andreas Müller [Fri, 13 Jun 2014 13:32:02 +0000 (13:32 +0000)]
minor

10 years agosome java doc
Andreas Müller [Fri, 13 Jun 2014 10:02:26 +0000 (10:02 +0000)]
some java doc

10 years agostart bugfixing and refactoring sortindex handling in TaxonNode
Andreas Müller [Fri, 13 Jun 2014 09:46:45 +0000 (09:46 +0000)]
start bugfixing and refactoring sortindex handling in TaxonNode

10 years ago - added null check
Patric Plitzner [Wed, 11 Jun 2014 14:22:41 +0000 (14:22 +0000)]
 - added null check

10 years ago - added service method to term service that retrieves terms by TermType
Patric Plitzner [Tue, 10 Jun 2014 11:46:10 +0000 (11:46 +0000)]
 - added service method to term service that retrieves terms by TermType

10 years agolatest changes to taxonX import
Andreas Müller [Tue, 10 Jun 2014 09:52:56 +0000 (09:52 +0000)]
latest changes to taxonX import

10 years agoupdates to taxonX import
Andreas Müller [Sat, 7 Jun 2014 21:00:38 +0000 (21:00 +0000)]
updates to taxonX import

10 years agoallow zoonames with year behind whitespace, not comma
Andreas Müller [Sat, 7 Jun 2014 13:45:40 +0000 (13:45 +0000)]
allow zoonames with year behind whitespace, not comma

10 years agoremove deprecated method
Andreas Müller [Fri, 6 Jun 2014 20:58:06 +0000 (20:58 +0000)]
remove deprecated method

10 years agolatest updates to taxonX import
Andreas Müller [Fri, 6 Jun 2014 20:52:45 +0000 (20:52 +0000)]
latest updates to taxonX import

10 years agobetter handling of countries in gathering unit
Andreas Müller [Fri, 6 Jun 2014 20:52:11 +0000 (20:52 +0000)]
better handling of countries in gathering unit

10 years agoremove generate title
Andreas Müller [Fri, 6 Jun 2014 20:48:58 +0000 (20:48 +0000)]
remove generate title

10 years agominor
Andreas Müller [Fri, 6 Jun 2014 20:47:29 +0000 (20:47 +0000)]
minor

10 years agoremove deprecated method
Andreas Müller [Fri, 6 Jun 2014 20:45:24 +0000 (20:45 +0000)]
remove deprecated method

10 years agofix matching for Integer #4229
Andreas Müller [Fri, 6 Jun 2014 13:55:30 +0000 (13:55 +0000)]
fix matching for Integer  #4229

10 years agolatest changes to TaxonX import
Andreas Müller [Thu, 5 Jun 2014 14:03:27 +0000 (14:03 +0000)]
latest changes to TaxonX import

10 years agominor
Andreas Müller [Thu, 5 Jun 2014 12:19:06 +0000 (12:19 +0000)]
minor

10 years agofix "Error occurred when trying retrieve title for Named Area"
Andreas Müller [Tue, 3 Jun 2014 16:09:16 +0000 (16:09 +0000)]
fix "Error occurred when trying retrieve title for Named Area"

10 years agolatest changes to taxonX import
Andreas Müller [Tue, 3 Jun 2014 15:25:50 +0000 (15:25 +0000)]
latest changes to taxonX import

10 years agominor
Andreas Müller [Tue, 3 Jun 2014 14:41:33 +0000 (14:41 +0000)]
minor

10 years ago - made constructor protected to avoid JavaAssistEnhancementException (see https...
Patric Plitzner [Tue, 3 Jun 2014 14:35:08 +0000 (14:35 +0000)]
 - made constructor protected to avoid JavaAssistEnhancementException (see https://stackoverflow.com/questions/7273125/hibernate-envers-and-javassist-enhancement-failed-exception)

10 years ago - fixed documentation
Patric Plitzner [Tue, 3 Jun 2014 14:33:00 +0000 (14:33 +0000)]
 - fixed documentation

10 years ago - deleted invalid assert statement
Patric Plitzner [Tue, 3 Jun 2014 06:38:13 +0000 (06:38 +0000)]
 - deleted invalid assert statement

10 years agofix for TaxonComparatorSearch
Andreas Müller [Mon, 2 Jun 2014 16:53:25 +0000 (16:53 +0000)]
fix for TaxonComparatorSearch

10 years ago - completed implementation of querying for the original unit from a GBIF response
Patric Plitzner [Mon, 2 Jun 2014 13:51:04 +0000 (13:51 +0000)]
 - completed implementation of querying for the original unit from a GBIF response

10 years ago - added service methods for querying original record via BioCASE if found in GBIF...
Patric Plitzner [Mon, 2 Jun 2014 09:41:52 +0000 (09:41 +0000)]
 - added service methods for querying original record via BioCASE if found in GBIF response

10 years agocorrected query to taxonUuid
Cherian Mathew [Fri, 30 May 2014 10:35:45 +0000 (10:35 +0000)]
corrected query to taxonUuid

10 years ago[maven-release-plugin] prepare for next development iteration
edit-jenkins [Fri, 30 May 2014 07:56:35 +0000 (07:56 +0000)]
[maven-release-plugin] prepare for next development iteration

10 years ago[maven-release-plugin] prepare release cdmlib-parent-3.3.5
edit-jenkins [Fri, 30 May 2014 07:56:31 +0000 (07:56 +0000)]
[maven-release-plugin] prepare release cdmlib-parent-3.3.5

10 years agoset sorting in getChildNodes optional & minor for delete in bulk editor
Katja Luther [Thu, 29 May 2014 20:47:01 +0000 (20:47 +0000)]
set sorting in getChildNodes optional & minor for delete in bulk editor

10 years agoimprove to better fulfill the Comparator contract
Andreas Müller [Wed, 28 May 2014 23:34:22 +0000 (23:34 +0000)]
improve to better fulfill the Comparator contract

10 years agoimprove to better fulfill the Comparator contract
Andreas Müller [Wed, 28 May 2014 23:21:21 +0000 (23:21 +0000)]
improve to better fulfill the Comparator contract

10 years agoimprove TaxonComparator to better fulfill the general Comparator contract.
Andreas Müller [Wed, 28 May 2014 23:10:15 +0000 (23:10 +0000)]
improve TaxonComparator to better fulfill the general Comparator contract.

10 years agofurther improve comparator contract implementation for TaxonComparatorSearch #4230
Andreas Müller [Wed, 28 May 2014 22:35:08 +0000 (22:35 +0000)]
further improve comparator contract implementation for TaxonComparatorSearch  #4230

10 years agoremove logging
Andreas Müller [Wed, 28 May 2014 17:46:38 +0000 (17:46 +0000)]
remove logging

10 years agofixing #4230, comparison issue
Andreas Müller [Wed, 28 May 2014 17:45:57 +0000 (17:45 +0000)]
fixing #4230, comparison issue

10 years ago - extended GbifResponse and BioCase services to query for a single record with a...
Patric Plitzner [Wed, 28 May 2014 14:09:53 +0000 (14:09 +0000)]
 - extended GbifResponse and BioCase services to query for a single record with a specific unitID

10 years ago - added workaround for year range queries because GBIF does not yet support eventDat...
Patric Plitzner [Wed, 28 May 2014 09:17:27 +0000 (09:17 +0000)]
 - added workaround for year range queries because GBIF does not yet support eventDate as query parameter