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diff --git a/.gitattributes b/.gitattributes
index e28f4548db07a00c2464a1f9b0ea137fa71b2e17..83d70730f7562715118980c46848b05b9159cc5b 100644 (file)
--- a/.gitattributes
+++ b/.gitattributes
@@ -6,6 +6,7 @@ app-import/src/main/java/eu/etaxonomy/cdm/app/berlinModelImport/BerlinModelImpor
 app-import/src/main/java/eu/etaxonomy/cdm/app/berlinModelImport/BerlinModelSources.java -text
 app-import/src/main/java/eu/etaxonomy/cdm/app/berlinModelImport/CichorieaeActivator.java -text
 app-import/src/main/java/eu/etaxonomy/cdm/app/berlinModelImport/DipteraActivator.java -text
+app-import/src/main/java/eu/etaxonomy/cdm/app/berlinModelImport/ErmsActivator.java -text
 app-import/src/main/java/eu/etaxonomy/cdm/app/berlinModelImport/EuroMedActivator.java -text
 app-import/src/main/java/eu/etaxonomy/cdm/app/berlinModelImport/SalvadorActivator.java -text
 app-import/src/main/java/eu/etaxonomy/cdm/app/berlinModelImport/TreeCreator.java -text

diff --git a/app-import/src/main/java/eu/etaxonomy/cdm/app/berlinModelImport/ErmsActivator.java b/app-import/src/main/java/eu/etaxonomy/cdm/app/berlinModelImport/ErmsActivator.java
new file mode 100644 (file)
index 0000000..93a2f92
--- /dev/null
+++ b/app-import/src/main/java/eu/etaxonomy/cdm/app/berlinModelImport/ErmsActivator.java
@@ -0,0 +1,149 @@
+/**\r
+* Copyright (C) 2007 EDIT\r
+* European Distributed Institute of Taxonomy \r
+* http://www.e-taxonomy.eu\r
+* \r
+* The contents of this file are subject to the Mozilla Public License Version 1.1\r
+* See LICENSE.TXT at the top of this package for the full license terms.\r
+*/\r
+\r
+package eu.etaxonomy.cdm.app.berlinModelImport;\r
+\r
+import java.util.UUID;\r
+\r
+import org.apache.log4j.Logger;\r
+\r
+import eu.etaxonomy.cdm.api.application.CdmApplicationController;\r
+import eu.etaxonomy.cdm.app.common.CdmDestinations;\r
+import eu.etaxonomy.cdm.database.DbSchemaValidation;\r
+import eu.etaxonomy.cdm.database.ICdmDataSource;\r
+import eu.etaxonomy.cdm.io.berlinModel.BerlinModelImportConfigurator;\r
+import eu.etaxonomy.cdm.io.common.CdmDefaultImport;\r
+import eu.etaxonomy.cdm.io.common.Source;\r
+import eu.etaxonomy.cdm.io.common.IImportConfigurator.CHECK;\r
+import eu.etaxonomy.cdm.io.common.IImportConfigurator.DO_REFERENCES;\r
+import eu.etaxonomy.cdm.io.tcs.TcsImportConfigurator;\r
+import eu.etaxonomy.cdm.model.common.ISourceable;\r
+import eu.etaxonomy.cdm.model.description.FeatureTree;\r
+import eu.etaxonomy.cdm.model.name.NomenclaturalCode;\r
+import eu.etaxonomy.cdm.model.name.ZoologicalName;\r
+\r
+\r
+/**\r
+ * TODO add the following to a wiki page:\r
+ * HINT: If you are about to import into a mysql data base running under windows and if you wish to dump and restore the resulting data bas under another operation systen \r
+ * you must set the mysql system variable lower_case_table_names = 0 in order to create data base with table compatible names.\r
+ * \r
+ * \r
+ * @author a.mueller\r
+ *\r
+ */\r
+public class ErmsActivator {\r
+       private static final Logger logger = Logger.getLogger(ErmsActivator.class);\r
+\r
+       //database validation status (create, update, validate ...)\r
+       static DbSchemaValidation hbm2dll = DbSchemaValidation.CREATE;\r
+       static final Source berlinModelSource = BerlinModelSources.PESI_ERMS();\r
+       static final ICdmDataSource cdmDestination = CdmDestinations.cdm_pesi_erms();\r
+       static final UUID secUuid = UUID.fromString("8bd27d84-fd4f-4bfa-bde0-3e6b7311b334");\r
+       static final int sourceSecId = 500000;\r
+       static final UUID featureTreeUuid = UUID.fromString("33cbf7a8-0c47-4d47-bd11-b7d77a38d0f6");\r
+       static final Object[] featureKeyList = new Integer[]{1,4,5,10,11,12,13,99}; \r
+       \r
+       //check - import\r
+       static final CHECK check = CHECK.CHECK_AND_IMPORT;\r
+\r
+\r
+       //NomeclaturalCode\r
+       static final NomenclaturalCode nomenclaturalCode = NomenclaturalCode.ICZN();\r
+\r
+       //ignore null\r
+       static final boolean ignoreNull = true;\r
+       \r
+       //authors\r
+       static final boolean doAuthors = true;\r
+       //references\r
+       static final DO_REFERENCES doReferences =  DO_REFERENCES.ALL;\r
+       //names\r
+       static final boolean doTaxonNames = true;\r
+       static final boolean doRelNames = true;\r
+       static final boolean doNameStatus = true;\r
+       static final boolean doTypes = true;\r
+       static final boolean doNameFacts = true;\r
+       \r
+       //taxa\r
+       static final boolean doTaxa = true;\r
+       static final boolean doRelTaxa = true;\r
+       static final boolean doFacts = true;\r
+       static final boolean doOccurences = false;\r
+       \r
+//     //authors\r
+//     static final boolean doAuthors = false;\r
+//     //references\r
+//     static final DO_REFERENCES doReferences =  DO_REFERENCES.ALL;\r
+//     //names\r
+//     static final boolean doTaxonNames = false;\r
+//     static final boolean doRelNames = false;\r
+//     static final boolean doNameStatus = false;\r
+//     static final boolean doTypes = false;\r
+//     static final boolean doNameFacts = false;\r
+//     \r
+//     //taxa\r
+//     static final boolean doTaxa = false;\r
+//     static final boolean doRelTaxa = false;\r
+//     static final boolean doFacts = false;\r
+//     static final boolean doOccurences = false;\r
+       \r
+       \r
+       \r
+       /**\r
+        * @param args\r
+        */\r
+       public static void main(String[] args) {\r
+               System.out.println("Start import from BerlinModel("+ berlinModelSource.getDatabase() + ") ...");\r
+               \r
+               //make BerlinModel Source\r
+               Source source = berlinModelSource;\r
+               ICdmDataSource destination = cdmDestination;\r
+               \r
+               BerlinModelImportConfigurator bmImportConfigurator = BerlinModelImportConfigurator.NewInstance(source,  destination);\r
+               \r
+               bmImportConfigurator.setSecUuid(secUuid);\r
+               bmImportConfigurator.setSourceSecId(sourceSecId);\r
+               bmImportConfigurator.setNomenclaturalCode(nomenclaturalCode);\r
+\r
+               bmImportConfigurator.setIgnoreNull(ignoreNull);\r
+               bmImportConfigurator.setDoAuthors(doAuthors);\r
+               bmImportConfigurator.setDoReferences(doReferences);\r
+               bmImportConfigurator.setDoTaxonNames(doTaxonNames);\r
+               bmImportConfigurator.setDoRelNames(doRelNames);\r
+               bmImportConfigurator.setDoNameStatus(doNameStatus);\r
+               bmImportConfigurator.setDoTypes(doTypes);\r
+               bmImportConfigurator.setDoNameFacts(doNameFacts);\r
+               \r
+               bmImportConfigurator.setDoTaxa(doTaxa);\r
+               bmImportConfigurator.setDoRelTaxa(doRelTaxa);\r
+               bmImportConfigurator.setDoFacts(doFacts);\r
+               bmImportConfigurator.setDoOccurrence(doOccurences);\r
+               bmImportConfigurator.setDbSchemaValidation(hbm2dll);\r
+\r
+               bmImportConfigurator.setCheck(check);\r
+               \r
+               // invoke import\r
+               CdmDefaultImport<TcsImportConfigurator> bmImport = new CdmDefaultImport<TcsImportConfigurator>();\r
+               bmImport.invoke(bmImportConfigurator);\r
+               \r
+               if (bmImportConfigurator.getCheck().equals(CHECK.CHECK_AND_IMPORT)  || bmImportConfigurator.getCheck().equals(CHECK.IMPORT_WITHOUT_CHECK)    ){\r
+                       CdmApplicationController app = bmImportConfigurator.getCdmAppController();\r
+                       ISourceable obj = app.getCommonService().getSourcedObjectByIdInSource(ZoologicalName.class, "1000027", null);\r
+                       logger.info(obj);\r
+                       \r
+                       //make feature tree\r
+                       FeatureTree tree = TreeCreator.flatTree(featureTreeUuid, bmImportConfigurator.getFeatureMap(), featureKeyList);\r
+                       app = bmImportConfigurator.getCdmAppController();\r
+                       app.getDescriptionService().saveFeatureTree(tree);\r
+               }\r
+               System.out.println("End import from BerlinModel ("+ source.getDatabase() + ")...");\r
+       }\r
+\r
+}\r