cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/service/ClassificationServiceImplTest.java

   1 // $Id$
   2 /**
   3 * Copyright (C) 2007 EDIT
   4 * European Distributed Institute of Taxonomy
   5 * http://www.e-taxonomy.eu
   6 *
   7 * The contents of this file are subject to the Mozilla Public License Version 1.1
   8 * See LICENSE.TXT at the top of this package for the full license terms.
   9 */
  10
  11 package eu.etaxonomy.cdm.api.service;
  12
  13 import java.io.File;
  14 import java.io.FileNotFoundException;
  15 import java.io.FileOutputStream;
  16 import java.util.ArrayList;
  17 import java.util.Arrays;
  18 import java.util.Collections;
  19 import java.util.Comparator;
  20 import java.util.List;
  21 import java.util.UUID;
  22
  23 import junit.framework.Assert;
  24
  25 import org.apache.log4j.Level;
  26 import org.apache.log4j.Logger;
  27 import org.junit.Ignore;
  28 import org.junit.Test;
  29 import org.springframework.beans.factory.annotation.Autowired;
  30 import org.unitils.dbunit.annotation.DataSet;
  31 import org.unitils.spring.annotation.SpringBeanByType;
  32
  33 import eu.etaxonomy.cdm.model.name.Rank;
  34 import eu.etaxonomy.cdm.model.taxon.Classification;
  35 import eu.etaxonomy.cdm.model.taxon.ITaxonNodeComparator;
  36 import eu.etaxonomy.cdm.model.taxon.TaxonNode;
  37 import eu.etaxonomy.cdm.model.taxon.TaxonNodeByNameComparator;
  38 import eu.etaxonomy.cdm.test.integration.CdmIntegrationTest;
  39
  40 import eu.etaxonomy.cdm.model.name.NonViralName;
  41
  42 /**
  43  * @author n.hoffmann
  44  * @created Sep 22, 2009
  45  * @version 1.0
  46  */
  47 public class ClassificationServiceImplTest extends CdmIntegrationTest{
  48     @SuppressWarnings("unused")
  49     private static final Logger logger = Logger.getLogger(ClassificationServiceImplTest.class);
  50
  51     @SpringBeanByType
  52     IClassificationService service;
  53
  54     @SpringBeanByType
  55     ITaxonNodeService taxonNodeService;
  56     private static final List<String> NODE_INIT_STRATEGY = Arrays.asList(new String[]{
  57             "childNodes",
  58             "childNodes.taxon",
  59             "childNodes.taxon.name",
  60             "taxon.sec",
  61             "taxon.name.*"
  62             });
  63
  64     private Comparator<? super TaxonNode> taxonNodeComparator;
  65
  66
  67     /**
  68      * Test method for {@link eu.etaxonomy.cdm.api.service.ClassificationServiceImpl#setTaxonNodeComparator(eu.etaxonomy.cdm.model.taxon.ITaxonNodeComparator)}.
  69      */
  70 //    @Test
  71     public final void testSetTaxonNodeComparator() {
  72
  73
  74 //              fail("Not yet implemented");
  75     }
  76
  77     /**
  78      * Test method for {@link eu.etaxonomy.cdm.api.service.ClassificationServiceImpl#loadTaxonNodeByTaxon(eu.etaxonomy.cdm.model.taxon.Taxon, java.util.UUID, java.util.List)}.
  79      */
  80 //    @Test
  81     public final void testLoadTaxonNodeByTaxon() {
  82 //              fail("Not yet implemented");
  83     }
  84
  85     /**
  86      * Test method for {@link eu.etaxonomy.cdm.api.service.ClassificationServiceImpl#loadTaxonNode(eu.etaxonomy.cdm.model.taxon.TaxonNode, java.util.List)}.
  87      */
  88     @Test
  89     public final void testLoadTaxonNode() {
  90 //              fail("Not yet implemented");
  91     }
  92
  93
  94     @Test
  95     @DataSet
  96     public final void testTaxonNodeByNameComparator() {
  97         taxonNodeComparator = new TaxonNodeByNameComparator();
  98         Classification classification = service.find(UUID.fromString("6c2bc8d9-ee62-4222-be89-4a8e31770878"));
  99
 100 //      try {
 101 //                      printDataSet(new FileOutputStream(new File("testTaxonNodeByNameComparator-dump.xml")), new String[] {"DefinedTermBase"});
 102 //              } catch (FileNotFoundException e) {
 103 //                      /* IGNORE */
 104 //              }
 105
 106         //List<TaxonNode> taxonNodes = service.loadRankSpecificRootNodes(classification, Rank.GENUS(), NODE_INIT_STRATEGY);
 107
 108         List<TaxonNode> taxonNodes = service.getAllNodes();
 109         for (TaxonNode node: taxonNodes){
 110             taxonNodeService.load(node.getUuid(), NODE_INIT_STRATEGY);
 111         }
 112         TaxonNode nodeGenus = taxonNodeService.find(UUID.fromString("19a4fce2-8be5-4ec7-a6a7-f3974047ba5f"));
 113         int index = taxonNodes.indexOf(nodeGenus);
 114         taxonNodes.remove(index);
 115         Collections.sort(taxonNodes, taxonNodeComparator);
 116
 117                 /**
 118                  * expected order is:
 119                  *  Acacia subg. Aculeiferum Pedley
 120          *  Acacia sect. Botrycephalae Yuji Sasaki
 121          *  Acacia subg. Phyllodineae N.Jacobsen, Bastm. & Yuji Sasaki
 122          *  Acacia cuspidifolia Maslin
 123          *  Acacia mearnsii Benth
 124                  */
 125
 126                 logger.setLevel(Level.DEBUG);
 127                 if(logger.isDebugEnabled()){
 128                         logger.debug("-------------");
 129         for (TaxonNode node: taxonNodes){
 130                                 logger.debug(node.getTaxon().getName().getTitleCache() );
 131             /*for (TaxonNode child : node.getChildNodes()){
 132                                 logger.debug(child.getTaxon().getName().getTitleCache());
 133             }*/
 134         }
 135                 }
 136
 137                 Assert.assertEquals("Acacia subg. Aculeiferum Pedley", taxonNodes.get(0).getTaxon().getName().getTitleCache());
 138
 139         /*
 140         ((TaxonNodeByNameComparator)taxonNodeComparator).setSortInfraGenericFirst(false);
 141         Collections.sort(taxonNodes, taxonNodeComparator);
 142
 143         Assert.assertEquals("Acacia cuspidifolia Maslin", taxonNodes.get(0).getTaxon().getName().getTitleCache());
 144         System.err.println();
 145         for (TaxonNode node: taxonNodes){
 146             System.err.println(node.getTaxon().getName().getTitleCache() );
 147             /*for (TaxonNode child : node.getChildNodes()){
 148                 System.err.println(child.getTaxon().getName().getTitleCache());
 149             }
 150         }*/
 151 //              fail("Not yet implemented");
 152
 153     }
 154
 155
 156     /**
 157      * Test method for {@link eu.etaxonomy.cdm.api.service.ClassificationServiceImpl#loadRankSpecificRootNodes(eu.etaxonomy.cdm.model.taxon.Classification, eu.etaxonomy.cdm.model.name.Rank, java.util.List)}.
 158      */
 159     @Test
 160     @DataSet
 161     @Ignore
 162     public final void testloadRankSpecificRootNodes(){
 163         Classification classification = service.find(UUID.fromString("6c2bc8d9-ee62-4222-be89-4a8e31770878"));
 164
 165         List<TaxonNode> taxonNodes = service.loadRankSpecificRootNodes(classification, Rank.SECTION_BOTANY(), NODE_INIT_STRATEGY);
 166         Assert.assertEquals(2, taxonNodes.size());
 167
 168     }
 169
 170     /**
 171      * Test method for {@link eu.etaxonomy.cdm.api.service.ClassificationServiceImpl#loadTreeBranch(eu.etaxonomy.cdm.model.taxon.TaxonNode, eu.etaxonomy.cdm.model.name.Rank, java.util.List)}.
 172      */
 173 //    @Test
 174     public final void testLoadTreeBranch() {
 175 //              fail("Not yet implemented");
 176     }
 177
 178     /**
 179      * Test method for {@link eu.etaxonomy.cdm.api.service.ClassificationServiceImpl#loadTreeBranchToTaxon(eu.etaxonomy.cdm.model.taxon.Taxon, eu.etaxonomy.cdm.model.taxon.Classification, eu.etaxonomy.cdm.model.name.Rank, java.util.List)}.
 180      */
 181 //    @Test
 182     public final void testLoadTreeBranchToTaxon() {
 183 //              fail("Not yet implemented");
 184     }
 185
 186     /**
 187      * Test method for {@link eu.etaxonomy.cdm.api.service.ClassificationServiceImpl#loadChildNodesOfTaxonNode(eu.etaxonomy.cdm.model.taxon.TaxonNode, java.util.List)}.
 188      */
 189 //    @Test
 190     public final void testLoadChildNodesOfTaxonNode() {
 191 //              fail("Not yet implemented");
 192     }
 193
 194     /**
 195      * Test method for {@link eu.etaxonomy.cdm.api.service.ClassificationServiceImpl#loadChildNodesOfTaxon(eu.etaxonomy.cdm.model.taxon.Taxon, eu.etaxonomy.cdm.model.taxon.Classification, java.util.List)}.
 196      */
 197 //    @Test
 198     public final void testLoadChildNodesOfTaxon() {
 199 //              fail("Not yet implemented");
 200     }
 201
 202     /**
 203      * Test method for {@link eu.etaxonomy.cdm.api.service.ClassificationServiceImpl#getTaxonNodeByUuid(java.util.UUID)}.
 204      */
 205 //    @Test
 206     public final void testGetTaxonNodeByUuid() {
 207 //              fail("Not yet implemented");
 208     }
 209
 210     /**
 211      * Test method for {@link eu.etaxonomy.cdm.api.service.ClassificationServiceImpl#getTreeNodeByUuid(java.util.UUID)}.
 212      */
 213 //    @Test
 214     public final void testGetTreeNodeByUuid() {
 215 //              fail("Not yet implemented");
 216     }
 217
 218     /**
 219      * Test method for {@link eu.etaxonomy.cdm.api.service.ClassificationServiceImpl#listClassifications(java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)}.
 220      */
 221 //    @Test
 222     public final void testListClassifications() {
 223 //              fail("Not yet implemented");
 224     }
 225
 226     /**
 227      * Test method for {@link eu.etaxonomy.cdm.api.service.ClassificationServiceImpl#getClassificationByUuid(java.util.UUID)}.
 228      */
 229 //    @Test
 230     public final void testGetClassificationByUuid() {
 231 //              fail("Not yet implemented");
 232     }
 233
 234     /**
 235      * Test method for {@link eu.etaxonomy.cdm.api.service.ClassificationServiceImpl#removeTaxonNode(eu.etaxonomy.cdm.model.taxon.TaxonNode)}.
 236      */
 237 //    @Test
 238     public final void testRemoveTaxonNode() {
 239 //              fail("Not yet implemented");
 240     }
 241
 242     /**
 243      * Test method for {@link eu.etaxonomy.cdm.api.service.ClassificationServiceImpl#removeTreeNode(eu.etaxonomy.cdm.model.taxon.ITreeNode)}.
 244      */
 245 //    @Test
 246     public final void testRemoveTreeNode() {
 247 //              fail("Not yet implemented");
 248     }
 249
 250     /**
 251      * Test method for {@link eu.etaxonomy.cdm.api.service.ClassificationServiceImpl#saveTaxonNode(eu.etaxonomy.cdm.model.taxon.TaxonNode)}.
 252      */
 253 //    @Test
 254     public final void testSaveTaxonNode() {
 255 //              fail("Not yet implemented");
 256     }
 257
 258     /**
 259      * Test method for {@link eu.etaxonomy.cdm.api.service.ClassificationServiceImpl#saveTaxonNodeAll(java.util.Collection)}.
 260      */
 261 //    @Test
 262     public final void testSaveTaxonNodeAll() {
 263 //              fail("Not yet implemented");
 264     }
 265
 266     /**
 267      * Test method for {@link eu.etaxonomy.cdm.api.service.ClassificationServiceImpl#saveTreeNode(eu.etaxonomy.cdm.model.taxon.ITreeNode)}.
 268      */
 269 //    @Test
 270     public final void testSaveTreeNode() {
 271 //              fail("Not yet implemented");
 272     }
 273
 274     /**
 275      * Test method for {@link eu.etaxonomy.cdm.api.service.ClassificationServiceImpl#getTaxonNodeUuidAndTitleCacheOfAcceptedTaxaByClassification(eu.etaxonomy.cdm.model.taxon.Classification)}.
 276      */
 277 //    @Test
 278     public final void testGetTaxonNodeUuidAndTitleCacheOfAcceptedTaxaByClassification() {
 279 //              fail("Not yet implemented");
 280     }
 281
 282     /**
 283      * Test method for {@link eu.etaxonomy.cdm.api.service.ClassificationServiceImpl#getUuidAndTitleCache()}.
 284      */
 285 //    @Test
 286     public final void testGetUuidAndTitleCache() {
 287 //              fail("Not yet implemented");
 288     }
 289
 290     /**
 291      * Test method for {@link eu.etaxonomy.cdm.api.service.ClassificationServiceImpl#getAllMediaForChildNodes(eu.etaxonomy.cdm.model.taxon.TaxonNode, java.util.List, int, int, int, java.lang.String[])}.
 292      */
 293 //    @Test
 294     public final void testGetAllMediaForChildNodesTaxonNodeListOfStringIntIntIntStringArray() {
 295 //              fail("Not yet implemented");
 296     }
 297
 298     /**
 299      * Test method for {@link eu.etaxonomy.cdm.api.service.ClassificationServiceImpl#getAllMediaForChildNodes(eu.etaxonomy.cdm.model.taxon.Taxon, eu.etaxonomy.cdm.model.taxon.Classification, java.util.List, int, int, int, java.lang.String[])}.
 300      */
 301 //    @Test
 302     public final void testGetAllMediaForChildNodesTaxonClassificationListOfStringIntIntIntStringArray() {
 303 //              fail("Not yet implemented");
 304     }
 305
 306     /**
 307      * Test method for {@link eu.etaxonomy.cdm.api.service.ClassificationServiceImpl#setDao(eu.etaxonomy.cdm.persistence.dao.taxon.IClassificationDao)}.
 308      */
 309     @Test
 310     public final void testSetDaoIClassificationDao() {
 311         Assert.assertNotNull(service);
 312     }
 313
 314     /**
 315      * Test method for {@link eu.etaxonomy.cdm.api.service.ClassificationServiceImpl#generateTitleCache()}.
 316      */
 317 //    @Test
 318     public final void testGenerateTitleCache() {
 319 //              fail("Not yet implemented");
 320     }
 321 }