cdmlib-print/src/main/resources/stylesheets/pdf/caryophyllales.xsl

   1 <?xml version="1.0" encoding="UTF-8"?>
   2 <!DOCTYPE xsl:stylesheet [<!ENTITY mdash "&#x2014;" > <!ENTITY ndash "&#x2013;" > <!ENTITY ndash "&#x2715;" >]>
   3
   4 <!--
   5
   6   CDM XSL Transformation
   7   Target Format: Flore d'Afrique Centrale
   8
   9 -->
  10 <xsl:stylesheet version="1.1" xmlns:xsl="http://www.w3.org/1999/XSL/Transform" xmlns:msxsl="http://exslt.org/common"
  11   xmlns:fo="http://www.w3.org/1999/XSL/Format" exclude-result-prefixes="fo">
  12
  13   <xsl:param name="abstract"/>
  14   <xsl:param name="title"/>
  15
  16
  17   <!-- ############### Constants and definitions ################### -->
  18
  19   <!-- **********************************
  20     ** global definitions
  21     *********************************** -->
  22   <xsl:param name="global-family-font">Times</xsl:param>
  23   <xsl:param name="global-size-font">10pt</xsl:param>
  24   <xsl:param name="global-title-font">10pt</xsl:param>
  25   <xsl:param name="global-line-height">12pt</xsl:param>
  26
  27   <xsl:param name="global-width-page">159mm</xsl:param>
  28   <xsl:param name="global-height-page">244mm</xsl:param>
  29
  30   <xsl:param name="global-indentation">0mm</xsl:param>
  31
  32   <!-- **********************************
  33     ** definitions for taxon pages
  34     *********************************** -->
  35   <xsl:param name="taxon-first-page-top-margin">30mm</xsl:param>
  36   <xsl:param name="taxon-page-top-margin">32mm</xsl:param>
  37   <xsl:param name="taxon-page-inner-margin">21mm</xsl:param>
  38   <xsl:param name="taxon-page-bottom-margin">32mm</xsl:param>
  39   <xsl:param name="graphic-height">150mm</xsl:param>
  40
  41   <xsl:param name="taxon-region-body-outer-margin">24mm</xsl:param>
  42
  43   <xsl:param name="taxon-region-before-extent">0mm</xsl:param>
  44   <xsl:param name="taxon-region-after-extent">0mm</xsl:param>
  45
  46   <xsl:param name="content-bg-color">white</xsl:param>
  47   <xsl:param name="taxon-header-family-font">Times</xsl:param>
  48   <xsl:param name="taxon-header-before-bg-color">white</xsl:param>
  49   <xsl:param name="taxon-header-after-bg-color">white</xsl:param>
  50   <xsl:param name="taxon-header-size-font">7pt</xsl:param>
  51
  52   <xsl:param name="distribution-size-font">8pt</xsl:param>
  53
  54   <xsl:param name="taxon-name-indentation">4mm</xsl:param>
  55   <xsl:param name="taxon-name-size-font">8pt</xsl:param>
  56   <xsl:param name="taxon-name-line-height">9.6pt</xsl:param>
  57
  58   <xsl:param name="taxon-header-style-font">italic</xsl:param>
  59   <xsl:param name="taxon-header-page-number-size-font">10pt</xsl:param>
  60   <xsl:param name="taxon-header-page-number-align-text">end</xsl:param>
  61   <xsl:param name="taxon-header-page-number-margin">11mm</xsl:param>
  62
  63   <xsl:param name="taxon-page-number-initial">1</xsl:param>
  64
  65   <!-- hardcoded ranks -->
  66   <xsl:param name="uuidFamily">af5f2481-3192-403f-ae65-7c957a0f02b6</xsl:param>
  67   <xsl:param name="uuidGenus">1b11c34c-48a8-4efa-98d5-84f7f66ef43a</xsl:param>
  68   <xsl:param name="uuidSubgenus">78786e16-2a70-48af-a608-494023b91904</xsl:param>
  69
  70
  71   <!-- **********************************
  72     ** html support
  73     *********************************** -->
  74
  75   <!-- format html i tags in text as italic -->
  76   <!--xsl:template match="i">
  77     <fo:inline font-style="italic">
  78       <xsl:value-of select="."/>
  79     </fo:inline>
  80   </xsl:template-->
  81
  82   <!-- format html b tags in text as bold -->
  83   <xsl:template match="b">
  84     <fo:inline font-weight="bold">
  85       <xsl:apply-templates/>
  86     </fo:inline>
  87   </xsl:template>
  88
  89   <!-- ########################################################################## -->
  90
  91
  92   <!-- start xsl output -->
  93   <xsl:output method="xml" version="1.0" omit-xml-declaration="no" indent="no"/>
  94   <xsl:param name="versionParam" select="'1.0'"/>
  95
  96   <!-- root element: root -->
  97   <xsl:template match="root">
  98     <fo:root xmlns:fo="http://www.w3.org/1999/XSL/Format">
  99
 100       <!-- defines page layout -->
 101       <fo:layout-master-set>
 102
 103         <!-- layout for odd taxon pages -->
 104         <fo:simple-page-master master-name="taxon_page_first" page-height="{$global-height-page}"
 105           page-width="{$global-width-page}" margin-top="{$taxon-first-page-top-margin}"
 106           margin-bottom="{$taxon-page-bottom-margin}" margin-left="{$taxon-page-inner-margin}">
 107           <fo:region-body margin-right="{$taxon-region-body-outer-margin}"/>
 108           <fo:region-before extent="{$taxon-region-before-extent}" region-name="odd-before"/>
 109           <fo:region-after extent="{$taxon-region-after-extent}" region-name="odd-after"/>
 110         </fo:simple-page-master>
 111
 112         <!-- layout for odd taxon pages -->
 113         <fo:simple-page-master master-name="taxon_page_odd" page-height="{$global-height-page}"
 114           page-width="{$global-width-page}" margin-top="{$taxon-page-top-margin}"
 115           margin-bottom="{$taxon-page-bottom-margin}" margin-left="{$taxon-page-inner-margin}">
 116           <fo:region-body margin-right="{$taxon-region-body-outer-margin}"/>
 117           <fo:region-before extent="{$taxon-region-before-extent}" region-name="odd-before"/>
 118           <fo:region-after extent="{$taxon-region-after-extent}" region-name="odd-after"/>
 119         </fo:simple-page-master>
 120
 121         <!-- layout for even taxon pages -->
 122         <fo:simple-page-master master-name="taxon_page_even" page-height="{$global-height-page}"
 123           page-width="{$global-width-page}" margin-top="{$taxon-page-top-margin}"
 124           margin-bottom="{$taxon-page-bottom-margin}" margin-left="0"
 125           margin-right="{$taxon-page-inner-margin}">
 126           <fo:region-body margin-left="{$taxon-region-body-outer-margin}"/>
 127           <fo:region-before extent="{$taxon-region-before-extent}" region-name="even-before"/>
 128           <fo:region-after extent="{$taxon-region-after-extent}" region-name="even-after"/>
 129
 130           <!--fo:leader leader-pattern="rule" leader-length="10mm"/-->
 131
 132         </fo:simple-page-master>
 133
 134
 135         <!-- defines repeatable page-sequence for layout of taxa -->
 136         <fo:page-sequence-master master-name="taxon_page">
 137           <fo:repeatable-page-master-alternatives>
 138             <fo:conditional-page-master-reference master-reference="taxon_page_first"
 139               page-position="first"/>
 140             <fo:conditional-page-master-reference master-reference="taxon_page_even"
 141               page-position="rest" odd-or-even="even"/>
 142             <fo:conditional-page-master-reference master-reference="taxon_page_odd"
 143               page-position="rest" odd-or-even="odd"/>
 144             <!--            <fo:conditional-page-master-reference master-reference="mclBoook_taxon_page_even"
 145               page-position="last"/>-->
 146           </fo:repeatable-page-master-alternatives>
 147         </fo:page-sequence-master>
 148       </fo:layout-master-set>
 149       <!-- end: defines page layout -->
 150
 151       <!-- page sequence for taxon view -->
 152       <fo:page-sequence master-reference="taxon_page"
 153         initial-page-number="{$taxon-page-number-initial}" force-page-count="no-force">
 154
 155         <fo:static-content flow-name="odd-before">
 156           <xsl:call-template name="right-extent"/>
 157         </fo:static-content>
 158
 159         <fo:static-content flow-name="even-before">
 160           <xsl:call-template name="left-extent"/>
 161         </fo:static-content>
 162
 163
 164
 165         <!-- format taxa -->
 166         <fo:flow flow-name="xsl-region-body">
 167
 168           <!--fo:block><xsl:value-of select="$abstract"/></fo:block-->
 169
 170           <fo:block font-family="{$global-family-font}" font-size="{$global-size-font}"
 171             line-height="{$global-line-height}" linefeed-treatment="preserve">
 172
 173             <fo:block text-align="center" font-weight="bold" font-size="global-title-font" linefeed-treatment="preserve">
 174               <xsl:value-of select="$title"/>
 175               <xsl:text>&#xA;</xsl:text>
 176               <xsl:text>&#xA;</xsl:text>
 177             </fo:block>
 178             <!--fo:block linefeed-treatment="preserve">
 179             <fo:inline font-weight="bold"><xsl:text>Abstract. </xsl:text></fo:inline>
 180             <xsl:value-of select="$abstract"/>
 181               <xsl:text>&#xA;</xsl:text>
 182             </fo:block-->
 183
 184             <xsl:for-each select="//TaxonNode">
 185               <xsl:apply-templates select="."/>
 186             </xsl:for-each>
 187
 188             <fo:block text-align="center" text-transform="uppercase" font-weight="bold" linefeed-treatment="preserve">
 189               <xsl:text>&#xA;</xsl:text>
 190               <xsl:text>REFERENCES</xsl:text>
 191             </fo:block>
 192             <xsl:text>&#xA;</xsl:text>
 193             <xsl:call-template name="References"/>
 194
 195             <fo:block text-align="center" font-weight="bold" linefeed-treatment="preserve">
 196               <xsl:text>&#xA;</xsl:text>
 197               <xsl:text>Noms scientifiques</xsl:text>
 198             </fo:block>
 199             <xsl:text>&#xA;</xsl:text>
 200             <xsl:call-template name="scientific-name-index"/>
 201           </fo:block>
 202         </fo:flow>
 203       </fo:page-sequence>
 204     </fo:root>
 205   </xsl:template>
 206
 207   <!-- TODO shorten this so that not repeating code for creating author in each xsl:when statement -->
 208   <xsl:template name="scientific-name-index">
 209     <!-- create a variable for the sorted scientific names for the index, then once sorted can select preceding to get the first occurance of
 210     the genusOrUninomial in the list-->
 211     <xsl:variable name="sortedcopy">
 212       <xsl:for-each select="//name">
 213         <xsl:sort select="genusOrUninomial" data-type="text" order="ascending"></xsl:sort>
 214         <xsl:sort select="specificEpithet" data-type="text" order="ascending"></xsl:sort>
 215         <xsl:copy-of select="."/>
 216       </xsl:for-each>
 217     </xsl:variable>
 218
 219     <fo:block margin-bottom="5mm" text-align="justify">
 220       <xsl:for-each select="$sortedcopy/*"><!-- or select="//name/genusOrUninomial-->
 221
 222         <xsl:variable name="genus" select="."/>
 223         <xsl:choose>
 224           <!-- family -->
 225           <xsl:when test="rank/uuid='af5f2481-3192-403f-ae65-7c957a0f02b6'">
 226             <fo:inline font-style="italic">
 227             <xsl:apply-templates select="genusOrUninomial"/>
 228             </fo:inline>
 229             <xsl:for-each select="taggedName/e">
 230               <xsl:if test="type='authors'">
 231                 <xsl:text> </xsl:text>
 232                 <xsl:value-of select="text"/>
 233               </xsl:if>
 234             </xsl:for-each>
 235           </xsl:when>
 236           <!-- genus -->
 237           <xsl:when test="rank/uuid='1b11c34c-48a8-4efa-98d5-84f7f66ef43a'">
 238             <fo:block>
 239               <fo:inline font-style="italic">
 240               <xsl:apply-templates select="genusOrUninomial"/>
 241               </fo:inline>
 242               <xsl:for-each select="taggedName/e">
 243                 <xsl:if test="type='authors'">
 244                   <xsl:text> </xsl:text>
 245                   <xsl:value-of select="text"/>
 246                 </xsl:if>
 247               </xsl:for-each>
 248             </fo:block>
 249           </xsl:when>
 250           <!-- subgenus -->
 251           <xsl:when test="rank/uuid='78786e16-2a70-48af-a608-494023b91904'">
 252             <fo:block>
 253               <xsl:apply-templates select="rank/representation_L10n"/>
 254               <xsl:text> </xsl:text>
 255               <fo:inline font-style="italic">
 256               <xsl:apply-templates select="genusOrUninomial"/>
 257               </fo:inline>
 258               <xsl:for-each select="taggedName/e">
 259                 <xsl:if test="type='authors'">
 260                   <xsl:text> </xsl:text>
 261                   <xsl:value-of select="text"/>
 262                 </xsl:if>
 263               </xsl:for-each>
 264             </fo:block>
 265           </xsl:when>
 266           <!-- species -->
 267           <xsl:when test="rank/uuid='b301f787-f319-4ccc-a10f-b4ed3b99a86d'">
 268
 269             <!--first occurance of the genusOrUninomial in the list is not indented -->
 270               <xsl:choose>
 271                 <xsl:when test="not(preceding::genusOrUninomial[1] = genusOrUninomial)">
 272                 <fo:block>
 273                   <fo:inline font-style="italic">
 274                 <xsl:apply-templates select="genusOrUninomial"/>
 275                 <xsl:text> </xsl:text>
 276                   <xsl:apply-templates select="specificEpithet"/>
 277                   </fo:inline>
 278                   <xsl:text> </xsl:text>
 279                   <!--xsl:apply-templates select="rank/titleCache"/-->
 280                   <xsl:for-each select="taggedName/e">
 281                     <xsl:if test="type='authors'">
 282                       <xsl:text> </xsl:text>
 283                       <xsl:value-of select="text"/>
 284                     </xsl:if>
 285                   </xsl:for-each>
 286
 287                 </fo:block>
 288                 </xsl:when>
 289                 <xsl:otherwise>
 290                   <fo:block text-indent="{$taxon-name-indentation}">
 291                     <fo:inline font-style="italic">
 292                       <xsl:apply-templates select="specificEpithet"/>
 293                     </fo:inline>
 294                       <xsl:text> </xsl:text>
 295                       <!--xsl:apply-templates select="rank/titleCache"/--><!-- for debugging -->
 296                     <xsl:for-each select="taggedName/e">
 297                       <xsl:if test="type='authors'">
 298                         <xsl:text> </xsl:text>
 299                         <xsl:value-of select="text"/>
 300                       </xsl:if>
 301                     </xsl:for-each>
 302                     </fo:block>
 303                 </xsl:otherwise>
 304               </xsl:choose>
 305
 306
 307           </xsl:when>
 308           <!-- variant d5feb6a5-af5c-45ef-9878-bb4f36aaf490-->
 309           <xsl:when test="rank/uuid='d5feb6a5-af5c-45ef-9878-bb4f36aaf490'">
 310             <fo:block text-indent="{$taxon-name-indentation}">
 311               <xsl:text>&ndash; </xsl:text> <!--concat ndash-->
 312               <xsl:apply-templates select="rank/representation_L10n_abbreviatedLabel"/>
 313               <xsl:text> </xsl:text>
 314               <fo:inline font-style="italic">
 315               <xsl:apply-templates select="specificEpithet"/>
 316               </fo:inline>
 317
 318               <xsl:for-each select="taggedName/e">
 319                 <xsl:if test="type='authors'">
 320                   <xsl:text> </xsl:text>
 321                   <xsl:value-of select="text"/>
 322                 </xsl:if>
 323               </xsl:for-each>
 324             </fo:block>
 325           </xsl:when>
 326           <!-- sub-species 462a7819-8b00-4190-8313-88b5be81fad5-->
 327           <xsl:when test="rank/uuid='462a7819-8b00-4190-8313-88b5be81fad5'">
 328             <fo:block text-indent="{$taxon-name-indentation}">
 329               <!--xsl:apply-templates select="specificEpithet"/--><!--remove - just for testing -->
 330               <xsl:text>- </xsl:text>
 331               <xsl:apply-templates select="rank/representation_L10n_abbreviatedLabel"/>
 332               <xsl:text> </xsl:text>
 333               <fo:inline font-style="italic">
 334               <xsl:apply-templates select="infraSpecificEpithet"/>
 335               </fo:inline>
 336               <!--xsl:variable name="full-name">
 337               <xsl:apply-templates select="../taggedName"/> we only want to add the authors from taggedName if taggedName/e/type='author' select text
 338               </xsl:variable-->
 339               <!--fo:inline font-style="bold">
 340                 <xsl:apply-templates select="$full-name"></xsl:apply-templates>
 341               </fo:inline-->
 342               <!--xsl:apply-templates select="substring-after(' ', $full-name)"></xsl:apply-templates-->
 343               <!--xsl:call-template name="dispay-author-name">
 344                 <xsl:with-param name="e" select="../taggedName/e"/>
 345               </xsl:call-template-->
 346               <xsl:for-each select="taggedName/e">
 347                 <xsl:if test="type='authors'">
 348                   <xsl:text> </xsl:text>
 349                   <xsl:value-of select="text"/>
 350                 </xsl:if>
 351               </xsl:for-each>
 352             </fo:block>
 353           </xsl:when>
 354           <!--xsl:otherwise-->
 355             <!-- for debugging LORNA DEBUGGING XSLT CHOOSE: <xsl:value-of
 356               select="../rank/uuid"/>: <xsl:value-of select="../titleCache"/>
 357           </xsl:otherwise!-->
 358         </xsl:choose>
 359       </xsl:for-each>
 360     </fo:block>
 361   </xsl:template>
 362
 363
 364   <xsl:template name="dispay-author-name"> <!-- call this template with node e - don't display uninomial for species -->
 365     <xsl:param name="e"/>
 366       <xsl:if test="$e/type='authors'">
 367         <xsl:text>++++++</xsl:text>
 368         <xsl:value-of select="$e/text"/>
 369       </xsl:if>
 370   </xsl:template>
 371
 372   <!-- HEADER -->
 373
 374   <xsl:template name="right-extent">
 375     <!--fo:block text-align="center">Page <fo:page-number/>
 376     </fo:block-->
 377     <fo:block font-family="{$taxon-header-family-font}" font-style="{$taxon-header-style-font}"
 378       font-size="{$taxon-header-size-font}">
 379       <!-- No pagination at the moment -->
 380       <fo:block font-size="{$taxon-header-page-number-size-font}" font-style="normal"
 381         padding-top="95%" text-align="end">| <fo:page-number padding-right="10%"
 382           border-right-width="11mm"/></fo:block>
 383       <!--text-align="{$taxon-header-page-number-align-text}"> | <fo:page-number/></fo:block> -->
 384       <!--margin-right="{$taxon-region-body-outer-margin}" -->
 385       <!-- &#x2014; -->
 386       <fo:block color="white">-</fo:block>
 387       <fo:block>
 388         <fo:retrieve-marker retrieve-class-name="pageTitleMarker"
 389           retrieve-position="first-starting-within-page" retrieve-boundary="document"/>
 390         <xsl:text> </xsl:text>
 391         <fo:retrieve-marker retrieve-class-name="pageTitleSectionMarker"
 392           retrieve-position="first-starting-within-page" retrieve-boundary="document"/>
 393       </fo:block>
 394     </fo:block>
 395   </xsl:template>
 396
 397   <xsl:template name="left-extent">
 398     <fo:block font-family="{$taxon-header-family-font}" font-style="{$taxon-header-style-font}"
 399       font-size="{$taxon-header-size-font}">
 400       <fo:block font-size="{$taxon-header-page-number-size-font}" font-style="normal"
 401         padding-top="95%" text-align="start"><fo:page-number padding-left="10%"
 402           border-right-width="11mm"/> |</fo:block>
 403       <!-- No pagination at the moment
 404       <fo:block font-size="{$taxon-header-page-number-size-font}"
 405         text-align="{$taxon-header-page-number-align-text}"> &#x2014; <fo:page-number/> &#x2014;
 406         </fo:block> -->
 407     </fo:block>
 408   </xsl:template>
 409
 410   <!--xsl:template name="odd-after-header">
 411     <fo:block font-family="{$taxon-header-family-font}" font-style="{$taxon-header-style-font}"
 412       font-size="{$taxon-header-size-font}">
 413       <fo:block>
 414         <fo:inline>
 415           <fo:retrieve-marker retrieve-class-name="pageTitleMarker"
 416             retrieve-position="last-starting-within-page" retrieve-boundary="document"/>
 417           <fo:retrieve-marker retrieve-class-name="pageTitleSectionMarker"
 418             retrieve-position="last-starting-within-page" retrieve-boundary="document"/>
 419         </fo:inline>
 420       </fo:block>
 421     </fo:block>
 422   </xsl:template-->
 423
 424
 425   <!--xsl:template name="even-before-header">
 426     <fo:block font-family="{$taxon-header-family-font}" font-style="{$taxon-header-style-font}"
 427       font-size="{$taxon-header-size-font}"-->
 428   <!--
 429       No pagination at the moment
 430       <fo:block color="white" font-size="{$taxon-header-page-number-size-font}">-</fo:block>
 431       <fo:block color="white">-</fo:block>-->
 432   <!--
 433     <fo:block>
 434         <fo:inline>
 435           <fo:retrieve-marker retrieve-class-name="pageTitleMarker"
 436             retrieve-position="first-starting-within-page" retrieve-boundary="document"/>
 437           <fo:retrieve-marker retrieve-class-name="pageTitleSectionMarker"
 438             retrieve-position="first-starting-within-page" retrieve-boundary="document"/>
 439         </fo:inline>
 440       </fo:block>
 441     </fo:block>
 442
 443   </xsl:template-->
 444
 445   <xsl:template name="even-after-header">
 446     <fo:block font-family="{$taxon-header-family-font}" font-style="{$taxon-header-style-font}"
 447       font-size="{$taxon-header-size-font}">
 448       <fo:block>
 449         <fo:inline>
 450           <fo:retrieve-marker retrieve-class-name="pageTitleMarker"
 451             retrieve-position="last-starting-within-page" retrieve-boundary="document"/>
 452           <fo:retrieve-marker retrieve-class-name="pageTitleSectionMarker"
 453             retrieve-position="last-starting-within-page" retrieve-boundary="document"/>
 454         </fo:inline>
 455       </fo:block>
 456       <!-- No pagination at the moment
 457       <fo:block color="white">-</fo:block>
 458       <fo:block font-size="{$taxon-header-page-number-size-font}"
 459         text-align="{$taxon-header-page-number-align-text}"> &#x2014; <fo:page-number/> &#x2014;
 460         </fo:block> -->
 461     </fo:block>
 462   </xsl:template>
 463
 464   <!-- GENERAL -->
 465
 466   <xsl:template match="TaxonNode" name="TaxonNode">
 467     <xsl:apply-templates select="Taxon"/>
 468   </xsl:template>
 469
 470   <xsl:template match="Taxon" name="Taxon">
 471     <!--xsl:call-template name="title"/--> <!-- sections don't have stitles as just creating a name list -->
 472     <xsl:apply-templates select="synonymy"/>
 473     <xsl:apply-templates select="descriptions"/>
 474     <xsl:apply-templates select="key"/>
 475   </xsl:template>
 476
 477
 478   <xsl:template name="title">
 479     <fo:block margin-bottom="5mm">
 480       <!-- we need to find a way to store the uuid in a variable xsl:parameter did not work or i was using it wrong -->
 481       <xsl:choose>
 482         <!-- family -->
 483         <xsl:when test="name/rank/uuid='af5f2481-3192-403f-ae65-7c957a0f02b6'">
 484           <fo:block font-weight="bold">
 485             <xsl:apply-templates select="name/genusOrUninomial"/>
 486           </fo:block>
 487         </xsl:when>
 488         <!-- genus -->
 489         <!-- we don't show the genus as a title for the caryophyllales -->
 490         <xsl:when test="name/rank/uuid='1b11c34c-48a8-4efa-98d5-84f7f66ef43a'">
 491           <fo:block>
 492             <xsl:apply-templates select="name/genusOrUninomial"/>
 493           </fo:block>
 494         </xsl:when>
 495         <!-- subgenus -->
 496         <xsl:when test="name/rank/uuid='78786e16-2a70-48af-a608-494023b91904'">
 497           <fo:block>
 498             <xsl:apply-templates select="name/rank/representation_L10n"/>
 499             <xsl:text> </xsl:text>
 500             <xsl:apply-templates select="name/genusOrUninomial"/>
 501           </fo:block>
 502         </xsl:when>
 503         <!-- species -->
 504         <xsl:when test="name/rank/uuid='b301f787-f319-4ccc-a10f-b4ed3b99a86d'">
 505           <fo:block>
 506             <xsl:apply-templates select="name/genusOrUninomial"/>
 507             <xsl:text> </xsl:text>
 508             <xsl:apply-templates select="name/specificEpithet"/>
 509           </fo:block>
 510         </xsl:when>
 511         <xsl:otherwise>
 512           <!-- for debugging --> <!--Unformatted title for rank uuid: <xsl:value-of
 513             select="name/rank/uuid"/>: <xsl:value-of select="name/titleCache"/>-->
 514         </xsl:otherwise>
 515       </xsl:choose>
 516     </fo:block>
 517   </xsl:template>
 518
 519   <!-- NAME -->
 520
 521   <xsl:template match="name">
 522
 523     <xsl:variable name="fontstyle">
 524     <xsl:choose>
 525     <xsl:when test="rank/uuid='af5f2481-3192-403f-ae65-7c957a0f02b6'">
 526       <xsl:value-of select="'bold'" />
 527     </xsl:when>
 528       <xsl:otherwise>
 529         <xsl:value-of select="'regular'" />
 530       </xsl:otherwise>
 531     </xsl:choose>
 532     </xsl:variable>
 533     <fo:block font-weight="{$fontstyle}">
 534     <xsl:apply-templates select="taggedName"/>
 535     <xsl:apply-templates select="nomenclaturalReference"/>
 536     </fo:block>
 537   </xsl:template>
 538
 539   <xsl:template match="taggedName">
 540     <xsl:for-each select="e">
 541       <xsl:choose>
 542         <xsl:when test="type='name'">
 543           <fo:inline font-style="italic">
 544             <xsl:value-of select="text"/>
 545           </fo:inline>
 546           <xsl:text> </xsl:text>
 547         </xsl:when>
 548         <xsl:when test="type='authors'">
 549           <xsl:value-of select="text"/>
 550         </xsl:when>
 551         <xsl:otherwise>
 552           <xsl:value-of select="text"/>
 553           <xsl:text> </xsl:text>
 554         </xsl:otherwise>
 555       </xsl:choose>
 556     </xsl:for-each>
 557   </xsl:template>
 558
 559
 560   <!-- first date in brackets -->
 561   <xsl:template match="nomenclaturalReference">
 562     <xsl:text> (</xsl:text>
 563     <fo:inline>
 564       <xsl:value-of select="authorTeam/titleCache"/>
 565       <xsl:text> </xsl:text>
 566       <xsl:value-of select="datePublished/start"/>: </fo:inline>
 567     <xsl:text> </xsl:text>
 568     <fo:inline>
 569       <xsl:value-of select="../nomenclaturalMicroReference"/>
 570     </fo:inline>
 571     <xsl:text>)</xsl:text>
 572   </xsl:template>
 573
 574   <!-- DESCRIPTIONS -->
 575
 576   <xsl:template match="descriptions" name="descriptions">
 577     <xsl:for-each select="features/feature">
 578       <xsl:choose>
 579         <xsl:when test="count(feature)!=0">
 580           <xsl:call-template name="secondLevelDescriptionElements"/>
 581         </xsl:when>
 582         <xsl:otherwise>
 583           <!-- everything except Citation -->
 584           <xsl:if test="uuid!='99b2842f-9aa7-42fa-bd5f-7285311e0101'">
 585             <xsl:call-template name="descriptionElements"/>
 586           </xsl:if>
 587           <!--xsl:apply-templates select="media/e/representations/e/parts/e/uri"/-->
 588         </xsl:otherwise>
 589       </xsl:choose>
 590     </xsl:for-each>
 591   </xsl:template>
 592
 593   <xsl:template name="descriptionElements">
 594     <xsl:choose>
 595       <xsl:when test="supportsCommonTaxonName='true'">
 596         <!-- for example Vernacular Name -->
 597         <xsl:call-template name="commonTaxonName"/>
 598       </xsl:when>
 599       <xsl:otherwise>
 600         <!-- for example Habitat, Material Examined -->
 601         <xsl:call-template name="textData"/>
 602       </xsl:otherwise>
 603     </xsl:choose>
 604   </xsl:template>
 605
 606   <xsl:template name="secondLevelDescriptionElements">
 607     <fo:block text-align="justify" margin-bottom="5mm">
 608       <!--fo:external-graphic src='http://lully.snv.jussieu.fr/xper2AppletThumbnailsMaker/sdd/images/ant_anatomy2.jpg'/-->
 609       <xsl:for-each select="feature">
 610
 611         <xsl:variable name="representation" select="representation_L10n"/>
 612         <xsl:if test="not(starts-with($representation, 'Material'))">
 613           <!--xsl:if test="not(starts-with($representation, 'Figures'))"-->
 614           <fo:inline keep-with-next.within-line="always">
 615
 616             <xsl:if test="not(starts-with($representation, 'Figures'))">
 617               <!-- The headings are in English - do we want to remove them altogether or have French headings -->
 618               <!--fo:inline text-decoration="underline" keep-with-next.within-line="always">
 619
 620                 <xsl:value-of select="representation_L10n"/>
 621               </fo:inline>
 622               <fo:inline>: </fo:inline-->
 623             </xsl:if>
 624
 625             <xsl:for-each select="descriptionelements/descriptionelement">
 626
 627               <xsl:variable name="desc_element_text" select="multilanguageText_L10n/text"/>
 628
 629               <!-- filter out repeated description element text. Lorna - could do this in the CDM so it doesn't occur in the XML but not sure why it's happening-->
 630               <xsl:variable name="prev_desc_element_text"
 631                 select="preceding-sibling::descriptionelement[1]/multilanguageText_L10n/text"/>
 632
 633               <fo:inline font-size="9pt" space-after="5mm">
 634
 635                 <xsl:if test="not(starts-with($desc_element_text, 'Figure'))">
 636
 637                   <xsl:choose>
 638                     <xsl:when test="position() = 1">
 639                       <xsl:apply-templates select="multilanguageText_L10n/text"/>
 640                     </xsl:when>
 641                     <xsl:otherwise>
 642                       <xsl:if test="$desc_element_text != $prev_desc_element_text">
 643                         <!-- checked in the tax editor and looks like only descriptionelement[1] refers to the species so don't need below-->
 644                         <!--xsl:apply-templates select="multilanguageText_L10n/text"/-->
 645                       </xsl:if>
 646                     </xsl:otherwise>
 647                   </xsl:choose>
 648
 649                 </xsl:if>
 650
 651               </fo:inline>
 652
 653               <!--xsl:apply-templates select="multilanguageText_L10n/text"/-->
 654               <!--xsl:apply-templates select="media"/-->
 655
 656               <!--TODO Lorna we need to work out which description element contains the uri node for each figure
 657             and place it next to the appropriate taxon in the output-->
 658
 659               <!--xsl:if test="not(starts-with($representation, 'Figures'))"-->
 660               <!--xsl:if test="position() = 1"-->
 661                 <!--xsl:value-of select="../../../../../../Taxon/name/titleCache"/-->
 662
 663              <!-- if it has the title map don't show it in the image section -->
 664
 665               <xsl:if test="not(starts-with(media/e/title_L10n,'Map'))">
 666                 <xsl:apply-templates select="media/e/representations/e/parts/e/uri"/>
 667               </xsl:if>
 668
 669
 670
 671
 672               <!--xsl:call-template name="uri">
 673                 <xsl:with-param name="uri-node" select="media/e/representations/e/parts/e/uri"/>
 674               </xsl:call-template-->
 675               <!--/xsl:if-->
 676               <!--xsl:apply-templates select="e[1]/name[1]/homotypicalGroup[1]/typifiedNames[1]/e/taxonBases[1]/e/descriptions[1]/e/elements[1]/e[1]/media[1]/e/representations[1]/e/parts[1]/e/uri"></xsl:apply-templates-->
 677
 678             </xsl:for-each>
 679
 680             <xsl:text> </xsl:text>
 681           </fo:inline>
 682         </xsl:if>
 683         <!--/xsl:if-->
 684       </xsl:for-each>
 685
 686     </fo:block>
 687
 688   </xsl:template>
 689
 690   <!-- IMAGES -->
 691
 692   <xsl:template match="uri">
 693     <!--xsl:template name="uri"-->
 694
 695     <xsl:param name="uri-node"/>
 696     <xsl:variable name="graphic" select="."/>
 697     <xsl:variable name="title" select="../../../../../title_L10n"/>
 698     <!--fo:block text-align="center"-->
 699
 700       <!--xsl:variable name="graphic" select="e/representations/e/parts/e/uri"/-->
 701
 702       <!-- Is there a description element of type Figure for this TaxonNode?-->
 703
 704       <xsl:choose>
 705
 706         <!--xsl:when test="contains($graphic,'jpg')"-->
 707         <xsl:when test="starts-with($title,'Map')">
 708           <fo:block keep-with-next="always" text-align="center">
 709
 710             <!--fo:inline text-align="center"-->
 711             <fo:external-graphic content-height="scale-to-fit" height="50mm"
 712               scaling="uniform" src="{$graphic}" padding-before="30" padding-after="2"
 713               display-align="center"/>
 714             <!--/fo:inline-->
 715           </fo:block>
 716         </xsl:when>
 717         <xsl:otherwise>
 718
 719           <fo:block keep-with-next="always" text-align="center">
 720
 721             <!--fo:inline text-align="center"-->
 722             <fo:external-graphic content-height="scale-to-fit" height="{$graphic-height}"
 723               scaling="uniform" src="{$graphic}" padding-before="30" padding-after="2"
 724               display-align="center"/>
 725             <!--/fo:inline-->
 726           </fo:block>
 727           <fo:block>
 728             <fo:leader leader-pattern="rule" leader-alignment="{$taxon-page-inner-margin}"
 729               rule-thickness="0.8pt" leader-length="114mm"/>
 730
 731           </fo:block>
 732         </xsl:otherwise>
 733       </xsl:choose>
 734
 735     <fo:block>
 736
 737       <!--fo:leader leader-pattern="rule" leader-length="120mm"/-->
 738       <fo:inline font-size="{$taxon-name-size-font}">
 739         <!--go back up to the description element and get the text for the Figure legend -->
 740         <xsl:apply-templates select="../../../../../../../multilanguageText_L10n/text"/>
 741       </fo:inline>
 742     </fo:block>
 743   </xsl:template>
 744
 745
 746   <xsl:template match="text">
 747     <!--fo:block font-size="9pt" space-after="5mm" -->
 748     <!--xsl:apply-templates select="node()"/-->
 749     <!--xsl:call-template name="add-markup">
 750       <xsl:with-param name="str" select="."/>
 751
 752       <xsl:with-param name="tag-name" select="b"/>
 753     </xsl:call-template-->
 754     <xsl:choose>
 755       <xsl:when test="contains(.,&quot;&lt;b&gt;&quot;)">
 756         <xsl:call-template name="add-markup">
 757           <xsl:with-param name="str" select="."/>
 758           <!--xsl:with-param name="tag-name" select="b"/-->
 759           <xsl:with-param name="tag-name">b</xsl:with-param>
 760         </xsl:call-template>
 761       </xsl:when>
 762       <xsl:otherwise>
 763         <xsl:call-template name="add-markup">
 764           <xsl:with-param name="str" select="."/>
 765           <xsl:with-param name="tag-name">i</xsl:with-param>
 766         </xsl:call-template>
 767       </xsl:otherwise>
 768     </xsl:choose>
 769
 770     <!--/fo:block -->
 771   </xsl:template>
 772
 773   <!-- TODO Can this template be made shorter by less nesting in the xsl:choose statements -->
 774   <xsl:template name="add-markup">
 775     <xsl:param name="str"/>
 776     <xsl:param name="tag-name"/>
 777
 778     <xsl:variable name="opening-tag">
 779       <xsl:value-of select="concat('&lt;', $tag-name, '&gt;')"> </xsl:value-of>
 780     </xsl:variable>
 781     <xsl:variable name="closing-tag">
 782       <xsl:value-of select="concat('&lt;/', $tag-name, '&gt;')"> </xsl:value-of>
 783     </xsl:variable>
 784
 785     <xsl:choose>
 786       <xsl:when test="contains($str, $opening-tag)">
 787         <xsl:variable name="before-tag" select="substring-before($str, $opening-tag)"/>
 788         <xsl:variable name="inside-tag"
 789           select="substring-before(substring-after($str,$opening-tag),$closing-tag)"/>
 790         <xsl:variable name="after-tag" select="substring-after($str, $closing-tag)"/>
 791         <xsl:choose>
 792           <xsl:when test="contains($before-tag, '#x2014;')">
 793             <xsl:call-template name="replace-string">
 794               <xsl:with-param name="text" select="$before-tag"/>
 795               <xsl:with-param name="replace" select="'&amp;#x2014;'" />
 796               <xsl:with-param name="with" select="'&mdash;'"/>
 797             </xsl:call-template>
 798           </xsl:when>
 799           <xsl:otherwise>
 800             <xsl:choose>
 801               <xsl:when test="contains($before-tag, '#x2013;')">
 802                 <xsl:call-template name="replace-string">
 803                   <xsl:with-param name="text" select="$before-tag"/>
 804                   <xsl:with-param name="replace" select="'&amp;#x2013;'" />
 805                   <xsl:with-param name="with" select="'&ndash;'"/>
 806                 </xsl:call-template>
 807               </xsl:when>
 808               <xsl:otherwise>
 809                 <xsl:choose>
 810                   <xsl:when test="contains($str, '#x2716;')">
 811                     <xsl:call-template name="replace-string">
 812                       <xsl:with-param name="text" select="$before-tag"/>
 813                       <xsl:with-param name="replace" select="'&amp;#x2715;'" />
 814                       <xsl:with-param name="with" select="'&ndash;'"/>
 815                     </xsl:call-template>
 816                   </xsl:when>
 817                   <xsl:otherwise>
 818                     <xsl:value-of select="$before-tag"/>
 819                   </xsl:otherwise>
 820                 </xsl:choose>
 821               </xsl:otherwise>
 822             </xsl:choose>
 823           </xsl:otherwise>
 824         </xsl:choose>
 825         <!-- add BOLD or italics when inside the appropriate tags -->
 826         <xsl:choose>
 827           <xsl:when test="$tag-name = 'b'">
 828             <fo:inline font-weight="bold">
 829               <xsl:value-of select="$inside-tag"/>
 830             </fo:inline>
 831           </xsl:when>
 832           <xsl:otherwise>
 833             <fo:inline font-style="italic">
 834               <xsl:value-of select="$inside-tag"/>
 835             </fo:inline>
 836           </xsl:otherwise>
 837         </xsl:choose>
 838         <!-- call template recursively with the remaining text after the tag -->
 839         <xsl:call-template name="add-markup">
 840           <xsl:with-param name="str" select="$after-tag"/>
 841           <xsl:with-param name="tag-name" select="$tag-name"/>
 842         </xsl:call-template>
 843       </xsl:when>
 844       <xsl:otherwise>
 845         <xsl:choose>
 846           <xsl:when test="contains($str, '#x2014;')">
 847             <xsl:call-template name="replace-string">
 848               <xsl:with-param name="text" select="$before-tag"/>
 849               <xsl:with-param name="replace" select="'&amp;#x2014;'" />
 850               <xsl:with-param name="with" select="'&mdash;'"/>
 851             </xsl:call-template>
 852           </xsl:when>
 853           <xsl:otherwise>
 854             <xsl:choose>
 855               <xsl:when test="contains($str, '#x2013;')">
 856                 <xsl:call-template name="replace-string">
 857                   <xsl:with-param name="text" select="$before-tag"/>
 858                   <xsl:with-param name="replace" select="'&amp;#x2013;'" />
 859                   <xsl:with-param name="with" select="'&ndash;'"/>
 860                 </xsl:call-template>
 861               </xsl:when>
 862               <xsl:otherwise>
 863                 <xsl:choose>
 864                   <xsl:when test="contains($str, '#x2716;')">
 865                     <xsl:call-template name="replace-string">
 866                       <xsl:with-param name="text" select="$before-tag"/>
 867                       <xsl:with-param name="replace" select="'&amp;#x2715;'" />
 868                       <xsl:with-param name="with" select="'&ndash;'"/>
 869                     </xsl:call-template>
 870                   </xsl:when>
 871                   <xsl:otherwise>
 872                     <xsl:value-of select="$str"/>
 873                   </xsl:otherwise>
 874                 </xsl:choose>
 875               </xsl:otherwise>
 876             </xsl:choose>
 877           </xsl:otherwise>
 878         </xsl:choose>
 879       </xsl:otherwise>
 880     </xsl:choose>
 881   </xsl:template>
 882
 883   <xsl:template name="replace-string">
 884     <xsl:param name="text"/>
 885     <xsl:param name="replace"/>
 886     <xsl:param name="with"/>
 887     <xsl:choose>
 888       <xsl:when test="contains($text,$replace)">
 889         <xsl:value-of select="substring-before($text,$replace)"/>
 890         <xsl:value-of select="$with"/>
 891         <xsl:call-template name="replace-string">
 892           <xsl:with-param name="text"
 893             select="substring-after($text,$replace)"/>
 894           <xsl:with-param name="replace" select="$replace"/>
 895           <xsl:with-param name="with" select="$with"/>
 896         </xsl:call-template>
 897       </xsl:when>
 898       <xsl:otherwise>
 899         <xsl:value-of select="$text"/>
 900       </xsl:otherwise>
 901     </xsl:choose>
 902   </xsl:template>
 903
 904   <xsl:template name="remove_ampersands">
 905     <xsl:param name="str"/>
 906     <xsl:choose>
 907       <xsl:when test="contains($str,&quot;amp;&quot;)"> </xsl:when>
 908     </xsl:choose>
 909   </xsl:template>
 910
 911   <xsl:template name="remove">
 912     <xsl:param name="value"/>
 913     <xsl:value-of select="concat(substring-before($value, 'amp;'), substring-after($value, 'amp;'))"
 914     />
 915   </xsl:template>
 916
 917   <!--xsl:template match="i">
 918     <fo:inline font-style="italic">
 919       <xsl:apply-templates select="node()"/>
 920     </fo:inline>
 921   </xsl:template-->
 922
 923   <xsl:template match="i">
 924     <fo:inline font-style="italic">
 925       <xsl:apply-templates/>
 926     </fo:inline>
 927   </xsl:template>
 928
 929   <xsl:template match="i//text()">
 930     <fo:inline font-style="italic">
 931       <xsl:apply-templates/>
 932     </fo:inline>
 933   </xsl:template>
 934
 935
 936   <xsl:template name="commonTaxonName">
 937     <fo:inline font-weight="bold">
 938       <xsl:value-of select="representation_L10n"/>
 939     </fo:inline>
 940     <xsl:text> &mdash; </xsl:text>
 941     <xsl:for-each select="descriptionelements/descriptionelement">
 942       <fo:inline>
 943         <xsl:choose>
 944           <xsl:when test="position() != last()">
 945             <xsl:value-of select="name"/> (<xsl:value-of select="language/representation_L10n"/>), </xsl:when>
 946           <xsl:otherwise>
 947             <xsl:value-of select="name"/> (<xsl:value-of select="language/representation_L10n"
 948             />).</xsl:otherwise>
 949         </xsl:choose>
 950       </fo:inline>
 951     </xsl:for-each>
 952   </xsl:template>
 953
 954   <xsl:template name="commonTaxonNameold2">
 955     <fo:inline font-weight="bold">
 956       <xsl:value-of select="representation_L10n"/>
 957     </fo:inline>
 958     <xsl:text> &mdash; </xsl:text>
 959     <xsl:for-each select="descriptionelements/descriptionelement">
 960       <fo:inline>
 961         <xsl:value-of select="name"/> (<xsl:value-of select="language/representation_L10n"/>) <xsl:choose>
 962           <xsl:when test="position() != last()">,</xsl:when>
 963           <xsl:otherwise>.</xsl:otherwise>
 964         </xsl:choose>
 965       </fo:inline>
 966     </xsl:for-each>
 967   </xsl:template>
 968
 969   <xsl:template name="commonTaxonNameold">
 970     <fo:inline font-weight="bold">
 971       <xsl:value-of select="representation_L10n"/>
 972     </fo:inline>
 973     <xsl:text> &mdash; </xsl:text>
 974     <xsl:for-each select="descriptionelements/descriptionelement">
 975       <fo:inline>
 976         <xsl:value-of select="name"/> (<xsl:value-of select="language/representation_L10n"/>),
 977       </fo:inline>
 978     </xsl:for-each>
 979   </xsl:template>
 980
 981   <xsl:template name="textData">
 982     <fo:block text-align="justify" margin-bottom="5mm">
 983       <!-- show all feature headlines except "ditribution" -->
 984       <!--xsl:if test="uuid!='9fc9d10c-ba50-49ee-b174-ce83fc3f80c6'">
 985         <fo:inline font-weight="bold">
 986           <xsl:value-of select="representation_L10n"/>
 987         </fo:inline>
 988         <xsl:text> – </xsl:text>
 989       </xsl:if-->
 990       <xsl:choose>
 991         <!-- 9fc9d10c-ba50-49ee-b174-ce83fc3f80c6 is Distribution -->
 992         <xsl:when test="uuid!='9fc9d10c-ba50-49ee-b174-ce83fc3f80c6'">
 993           <fo:inline font-weight="bold">
 994             <xsl:value-of select="representation_L10n"/>
 995             <!-- e.g. Habitat -->
 996           </fo:inline>
 997           <xsl:text> &mdash; </xsl:text>
 998         </xsl:when>
 999         <xsl:otherwise>
1000           <fo:inline font-weight="bold" keep-with-next="always">
1001             <xsl:text> Matériel examiné </xsl:text>
1002             <xsl:text>&#xA;</xsl:text>
1003           </fo:inline>
1004         </xsl:otherwise>
1005
1006       </xsl:choose>
1007       <!--xsl:for-each select="descriptionelements/descriptionelement">
1008         <fo:inline>
1009           <xsl:text>LINE 609</xsl:text>
1010           <xsl:apply-templates select="multilanguageText_L10n/text"/>
1011         </fo:inline>
1012       </xsl:for-each-->
1013
1014       <!-- LORNA TRY IMAGE HERE -->
1015       <!--xsl:apply-templates select="descriptionelements/descriptionelement[1]/media/e/representations/e/parts/e/uri"/-->
1016
1017       <xsl:apply-templates
1018         select="descriptionelements/descriptionelement[1]/multilanguageText_L10n/text"/>
1019
1020       <!-- get the map associated with the distribution, this is temporarily stored as a media object jpg created by
1021         Quentin's GIS software -->
1022       <xsl:if test="uuid='9fc9d10c-ba50-49ee-b174-ce83fc3f80c6'">
1023
1024         <!-- get the map attached to the feature 'Figures' -->
1025         <xsl:apply-templates
1026           select="../feature/feature/representation_L10n[.='Figures']/../descriptionelements/descriptionelement[1]/media/e/representations/e/parts/e/uri"/>
1027         <!--media/e/representations/e/parts/e/uri media/e/title_L10n[.='Map']/../representations/e/parts/e/uri"/-->
1028       </xsl:if>
1029
1030     </fo:block>
1031   </xsl:template>
1032
1033   <xsl:template match="key" name="key">
1034     <!--fo:block margin-bottom="5mm" line-height="{$taxon-name-line-height}" font-size="{$taxon-name-size-font}"-->
1035     <fo:block linefeed-treatment="preserve">
1036
1037       <fo:block font-weight="bold" text-align="center">
1038         <xsl:value-of select="HashMap/titleCache"/>
1039       </fo:block>
1040       <xsl:if test="HashMap/records/e">
1041         <xsl:text>&#xA;</xsl:text>
1042         <fo:table>
1043           <fo:table-column column-width="5mm"/>
1044           <fo:table-column column-width="5mm"/>
1045           <fo:table-column column-width="69mm"/>
1046           <fo:table-column column-width="36mm"/>
1047           <fo:table-body>
1048             <!--xsl:if test="ArrayList/e"-->
1049             <xsl:for-each select="HashMap/records/e">
1050
1051               <!-- TaxonLinkDto or PolytomousKeyNodeLinkDto-->
1052               <fo:table-row>
1053                 <fo:table-cell>
1054                   <fo:block>
1055                     <xsl:if test="edgeNumber = 1">
1056                       <xsl:value-of select="nodeNumber"/>
1057                       <xsl:text>.</xsl:text>
1058                     </xsl:if>
1059                   </fo:block>
1060                 </fo:table-cell>
1061                 <fo:table-cell>
1062                   <fo:block>&ndash;</fo:block>
1063                 </fo:table-cell>
1064                 <fo:table-cell>
1065                   <!--fo:block>
1066                     <xsl:apply-templates select="childStatement"/-->
1067                   <!--xsl:value-of select="concat(childStatement, '..............')"/-->
1068                   <!--xsl:text>.......................................................................................</xsl:text>
1069                   </fo:block-->
1070                   <fo:block text-align="justify" text-align-last="justify">
1071                     <!-- leader-length="auto"-->
1072                     <xsl:value-of select="childStatement"/>
1073                     <xsl:text> </xsl:text>
1074                     <fo:leader leader-pattern="dots"/>
1075                   </fo:block>
1076
1077                 </fo:table-cell>
1078                 <fo:table-cell display-align="after">
1079                   <fo:block font-style="italic" text-align="justify" text-align-last="justify">
1080                     <!-- leader-length="auto" text-align="right"-->
1081                     <fo:leader leader-pattern="dots"/>
1082                     <xsl:choose>
1083                       <xsl:when test="links/e[1]/class = 'PolytomousKeyNodeLinkDto'">
1084                         <xsl:value-of select="links/e[1]/nodeNumber"/>
1085                       </xsl:when>
1086                       <xsl:when test="links/e[1]/class = 'TaxonLinkDto'">
1087                         <xsl:variable name="taxonUuid" select="links/e[1]/uuid"/>
1088                         <xsl:variable name="genus"
1089                           select="//Taxon/uuid[.=$taxonUuid]/../name/genusOrUninomial"/>
1090                         <xsl:choose>
1091                           <xsl:when test="taxonUuid = $uuidSubgenus">
1092                             <xsl:variable name="repr"
1093                               select="//Taxon/uuid[.='71cd0e8d-47eb-4c66-829a-e21c705ee660']/../name/rank/representation_L10n"/>
1094                             <!--xsl:value-of select="concat($substring($genus,1,1), '. ', $repr)"/-->
1095                             <xsl:value-of select="concat($genus, '. ', $repr)"/>
1096                           </xsl:when>
1097                           <xsl:when test="taxonUuid = $uuidGenus">
1098                             <fo:block font-weight="bold" text-align="center"
1099                               text-transform="uppercase">
1100                               <xsl:apply-templates select="$genus"/>
1101                             </fo:block>
1102                           </xsl:when>
1103                           <xsl:otherwise>
1104                             <xsl:variable name="specificEpithet"
1105                               select="//Taxon/uuid[.=$taxonUuid]/../name/specificEpithet"/>
1106                             <!-- abbreviate the genus for species names -->
1107                             <!--xsl:value-of select="concat(substring($genus,1,1), '. ', $specificEpithet)"/-->
1108                             <xsl:value-of select="concat($genus, '. ', $specificEpithet)"/>
1109                           </xsl:otherwise>
1110                         </xsl:choose>
1111                       </xsl:when>
1112                       <xsl:otherwise/>
1113                     </xsl:choose>
1114                   </fo:block>
1115                 </fo:table-cell>
1116               </fo:table-row>
1117             </xsl:for-each>
1118
1119           </fo:table-body>
1120         </fo:table>
1121         <fo:leader leader-pattern="rule" leader-length="100%"/>
1122         <xsl:text>&#xA;</xsl:text>
1123       </xsl:if>
1124       <!-- new line for the end of the section -->
1125       <xsl:text>&#xA;</xsl:text>
1126     </fo:block>
1127   </xsl:template>
1128
1129
1130   <!-- SYNONYMY BLOCK -->
1131
1132   <xsl:template match="synonymy" name="synonymy">
1133     <!--fo:block margin-bottom="5mm" line-height="{$taxon-name-line-height}"
1134       font-size="{$taxon-name-size-font}"-->
1135       <fo:block text-align="justify" text-indent="-{$taxon-name-indentation}"
1136         start-indent="{$taxon-name-indentation}">
1137         <xsl:apply-templates select="../name"/>
1138         <!--xsl:call-template name="citations"/-->
1139         <!-- 99b2842f-9aa7-42fa-bd5f-7285311e0101 is Citation -->
1140         <xsl:call-template name="citations">
1141           <xsl:with-param name="descriptionelements"
1142             select="../descriptions/features/feature[uuid='99b2842f-9aa7-42fa-bd5f-7285311e0101']/descriptionelements"/>
1143           <xsl:with-param name="name-uuid" select="../name/uuid"/>
1144         </xsl:call-template>
1145         <!--xsl:text>.**********</xsl:text-->
1146         <xsl:apply-templates select="homotypicSynonymsByHomotypicGroup"/>
1147         <xsl:apply-templates select="../name/typeDesignations"/>
1148       </fo:block>
1149       <xsl:apply-templates select="heterotypicSynonymyGroups"/>
1150     <!--/fo:block-->
1151   </xsl:template>
1152
1153   <xsl:template match="homotypicSynonymsByHomotypicGroup">
1154     <xsl:for-each select="e">
1155       <xsl:text> - </xsl:text>
1156       <xsl:apply-templates select="name"/>
1157       <xsl:call-template name="citations">
1158         <!--LORNA Pass the description elements for the citation 99b2842f-9aa7-42fa-bd5f-7285311e0101 -->
1159         <xsl:with-param name="descriptionelements"
1160           select="../../../descriptions/features/feature[uuid='99b2842f-9aa7-42fa-bd5f-7285311e0101']/descriptionelements"/>
1161         <xsl:with-param name="name-uuid" select="name/uuid"/>
1162       </xsl:call-template>
1163     </xsl:for-each>
1164
1165     <!--xsl:apply-templates select="e[1]/name[1]/homotypicalGroup[1]/typifiedNames[1]/e/taxonBases[1]/e/descriptions[1]/e/elements[1]/e[1]/media[1]/e/representations[1]/e/parts[1]/e/uri"></xsl:apply-templates-->
1166   </xsl:template>
1167
1168   <xsl:template match="heterotypicSynonymyGroups">
1169     <xsl:for-each select="e">
1170       <fo:block text-align="start" text-indent="-{$taxon-name-indentation}"
1171         start-indent="{$taxon-name-indentation}">
1172         <xsl:for-each select="e">
1173           <xsl:apply-templates select="name"/>
1174           <xsl:call-template name="citations">
1175             <xsl:with-param name="descriptionelements"
1176               select="../../../../descriptions/features/feature[uuid='99b2842f-9aa7-42fa-bd5f-7285311e0101']/descriptionelements"/>
1177             <xsl:with-param name="name-uuid" select="name/uuid"/>
1178
1179           </xsl:call-template>
1180           <xsl:apply-templates select="name/typeDesignations"/>
1181         </xsl:for-each>
1182         <!--xsl:apply-templates select="e[1]/name/typeDesignations" /-->
1183       </fo:block>
1184     </xsl:for-each>
1185
1186   </xsl:template>
1187
1188   <xsl:template name="citations">
1189     <xsl:param name="name-uuid"/>
1190     <xsl:param name="descriptionelements"/>
1191     <!--xsl:for-each
1192       select="../descriptions/features/feature[uuid='99b2842f-9aa7-42fa-bd5f-7285311e0101']/descriptionelements/descriptionelement"-->
1193     <xsl:for-each select="$descriptionelements/descriptionelement">
1194       <!-- TODO sorting only works for the first citation, implement correctly -->
1195       <xsl:sort select="sources/e[1]/citation/datePublished/start"/>
1196       <xsl:for-each select="sources/e">
1197
1198         <xsl:variable name="lastname_text" select="citation/authorTeam/lastname"/>
1199         <xsl:variable name="prev_lastname_text" select="preceding-sibling::e[1]/citation/authorTeam/lastname"/>
1200
1201         <xsl:if test="nameUsedInSource/uuid=$name-uuid">
1202           <xsl:text>; </xsl:text>
1203           <fo:inline>
1204             <!--xsl:value-of select="citation/authorTeam/titleCache"/-->
1205             <!--TODO wrap this in a variable and compare the previous variable to this one to see if we're dealing with the same name-->
1206             <xsl:for-each select="citation/authorTeam/teamMembers/e">
1207               <xsl:value-of select="lastname"/>
1208               <xsl:choose>
1209                 <xsl:when test="position() != last()">
1210                   <xsl:text> &amp; </xsl:text>
1211                 </xsl:when>
1212               </xsl:choose>
1213             </xsl:for-each>
1214
1215 <xsl:choose>
1216             <xsl:when test="$lastname_text != $prev_lastname_text">
1217             <xsl:value-of select="citation/authorTeam/lastname"/><!--TODO We print lastname here as well as the author list is this a mistake?-->
1218
1219             <xsl:text> (</xsl:text>
1220             <xsl:value-of select="citation/datePublished/start"/>
1221             <xsl:text>: </xsl:text>
1222             <xsl:value-of select="citationMicroReference"/>
1223             <xsl:text>)</xsl:text>
1224             </xsl:when>
1225   <xsl:otherwise>
1226     <xsl:text> </xsl:text><!-- TODO For the first ref with a particlar name we should open brackets -->
1227     <xsl:value-of select="citation/datePublished/start"/>
1228     <xsl:if test="citationMicroReference != ''">
1229       <xsl:text>: </xsl:text>
1230       <xsl:value-of select="citationMicroReference"/>
1231     </xsl:if>
1232   </xsl:otherwise>
1233 </xsl:choose>
1234           </fo:inline>
1235         </xsl:if>
1236       </xsl:for-each>
1237     </xsl:for-each>
1238   </xsl:template>
1239
1240   <xsl:template name="citationsworks">
1241     <xsl:param name="name-uuid"/>
1242     <xsl:param name="descriptionelements"/>
1243     <!--xsl:for-each
1244       select="../descriptions/features/feature[uuid='99b2842f-9aa7-42fa-bd5f-7285311e0101']/descriptionelements/descriptionelement"-->
1245     <xsl:for-each select="$descriptionelements/descriptionelement">
1246       <!-- TODO sorting only works for the first citation, implement correctly -->
1247       <xsl:sort select="sources/e[1]/citation/datePublished/start"/>
1248       <xsl:for-each select="sources/e">
1249
1250         <xsl:if test="nameUsedInSource/uuid=$name-uuid">
1251           <xsl:text>; </xsl:text>
1252           <fo:inline>
1253             <!--xsl:value-of select="citation/authorTeam/titleCache"/-->
1254             <xsl:for-each select="citation/authorTeam/teamMembers/e">
1255               <xsl:value-of select="lastname"/>
1256               <xsl:choose>
1257                 <xsl:when test="position() != last()">
1258                   <xsl:text> &amp; </xsl:text>
1259                 </xsl:when>
1260               </xsl:choose>
1261             </xsl:for-each>
1262
1263             <xsl:value-of select="citation/authorTeam/lastname"/>
1264             <xsl:text> (</xsl:text>
1265             <xsl:value-of select="citation/datePublished/start"/>
1266             <xsl:text>: </xsl:text>
1267             <xsl:value-of select="citationMicroReference"/>
1268             <xsl:text>)</xsl:text>
1269           </fo:inline>
1270         </xsl:if>
1271       </xsl:for-each>
1272     </xsl:for-each>
1273   </xsl:template>
1274
1275
1276   <!-- this template is for the list of all citations at the end of the PDF -->
1277   <!-- references are under //citation and under //nomenclaturalReference and //inReference-->
1278   <!-- could try //class[.='Reference']/parent::node() to get all References -->
1279   <xsl:key name="citations-by-uuid" match="//citation | //nomenclaturalReference" use="uuid" />
1280   <!--xsl:key name="nomenclaturalrefs-by-uuid" match="//nomenclaturalReference" use="uuid" /-->
1281
1282   <xsl:template name="References">
1283     <!-- new line for the end of the section -->
1284     <xsl:text>&#xA;</xsl:text>
1285
1286     <!--nomenclaturalReference or citation-->
1287     <!-- problem with this is that if the same reference occurs under citaiton and under nomenclaturalReference it appears twice -->
1288     <!--xsl:for-each select="//nomenclaturalReference[count(. | key('nomenclaturalrefs-by-uuid', uuid)[1]) = 1] | //citation[count(. | key('citations-by-uuid', uuid)[1]) = 1]"-->
1289
1290     <xsl:for-each select="//nomenclaturalReference[count(. | key('citations-by-uuid', uuid)[1]) = 1] | //citation[count(. | key('citations-by-uuid', uuid)[1]) = 1]">
1291     <!--xsl:for-each select="//nomenclaturalReference[count(. | key('nomenclaturalrefs-by-uuid', uuid)[1]) = 1]"-->
1292       <!--xsl:for-each select="//nomenclaturalReference"-->
1293         <xsl:sort select="authorTeam/lastname | authorTeam/teamMembers/e[1]/lastname" />
1294       <xsl:sort select="datePublished/start"></xsl:sort>
1295
1296       <fo:block linefeed-treatment="preserve" text-align="justify" text-indent="-{$taxon-name-indentation}" start-indent="{$taxon-name-indentation}">
1297
1298         <fo:inline>
1299           <!-- filter out repeated citation uuids. Could write a controller method in the CDM to get all unique references for a TaxonNode -->
1300
1301           <!--I am only listing references which have at least one author name. If there are other references in the database - why don't these have an author name-->
1302               <xsl:if test="authorTeam/teamMembers/e[1]/lastname != '' or authorTeam/lastname != ''">
1303                 <!--xsl:text>&#xA;</xsl:text-->
1304                 <xsl:choose>
1305                   <xsl:when test="authorTeam/teamMembers/e[1]/lastname != ''">
1306                     <xsl:for-each select="authorTeam/teamMembers/e">
1307                       <fo:inline>
1308                         <xsl:value-of select="lastname"/>
1309                         <xsl:text> </xsl:text>
1310                         <xsl:value-of select="firstname"/>
1311                         <xsl:choose>
1312                           <xsl:when test="position() != last()">
1313                             <xsl:text> &amp; </xsl:text>
1314                           </xsl:when>
1315                         </xsl:choose>
1316                       </fo:inline>
1317                     </xsl:for-each>
1318                   </xsl:when>
1319                   <xsl:otherwise test="authorTeam/lastname != ''">
1320                     <fo:inline>
1321                       <xsl:value-of select="authorTeam/lastname"/>
1322                       <xsl:text> </xsl:text>
1323                       <xsl:value-of select="authorTeam/firstname"/>
1324                     </fo:inline>
1325                   </xsl:otherwise>
1326                 </xsl:choose>
1327
1328                 <xsl:if test="datePublished/start != ''">
1329                   <xsl:text> (</xsl:text>
1330                   <xsl:value-of select="datePublished/start"/>
1331                   <xsl:text>) </xsl:text>
1332                 </xsl:if>
1333
1334                 <xsl:apply-templates select="title"/>
1335                 <xsl:apply-templates select="volume"/>
1336                 <xsl:apply-templates select="pages"/>
1337                 <xsl:apply-templates select="placePublished"/>
1338                 <xsl:apply-templates select="publisher"/>
1339
1340                 <!-- if inReference has child nodes-->
1341                 <xsl:if test="count(inReference/*) &gt; 0">
1342
1343                   <xsl:text>In </xsl:text>
1344                   <xsl:apply-templates select="inReference/title"/>
1345                   <xsl:apply-templates select="inReference/volume"/>
1346                   <xsl:apply-templates select="inReference/pages"/>
1347                   <xsl:apply-templates select="inReference/placePublished"/>
1348                   <xsl:apply-templates select="inReference/publisher"/>
1349                 </xsl:if>
1350                 <!--add template match to self:: that works for the above whether it's a citation or nomenclaturalReference -->
1351                 <!-- new line for the end of the section -->
1352                 <xsl:text>&#xA;</xsl:text>
1353               </xsl:if>
1354         </fo:inline>
1355       </fo:block>
1356     </xsl:for-each>
1357   </xsl:template>
1358
1359   <xsl:template match="*">
1360
1361     <xsl:value-of select="."/>
1362
1363     <xsl:if test="name(.) = 'title' or name(.) = 'publisher' or name(.) = 'pages'">
1364       <!-- . if pages or publisher or title - comma if placePublished -->
1365       <xsl:text>. </xsl:text>
1366     </xsl:if>
1367
1368     <xsl:if test="name(.) = 'volume'">
1369       <xsl:text>: </xsl:text>
1370     </xsl:if>
1371
1372     <xsl:if test="(../type = 'Book' or ../type = 'BookSection') and name(.) = 'placePublished' and . != ''">
1373       <xsl:text>, </xsl:text>
1374     </xsl:if>
1375
1376
1377   </xsl:template>
1378
1379
1380   <xsl:template name="Referencesold">
1381
1382       <!-- need to sort by lastname of the first author i.e. //citation/authorTeam/teamMembers/e[1]/lastname -->
1383       <xsl:for-each select="//citation">
1384
1385         <!-- TODO sorting only works for the first citation, implement correctly -->
1386         <xsl:sort select="authorTeam/lastname"/>
1387         <xsl:sort select="authorTeam/teamMembers/e[1]/lastname"/>
1388         <fo:block>
1389         <fo:inline>
1390
1391           <!-- filter out repeated citation uuids. Could write a controller method in the CDM to get all unique references for a TaxonNode -->
1392           <xsl:variable name="prev_citation_uuid" select="preceding-sibling::citation/uuid"/>
1393           <xsl:variable name="citation_uuid" select="uuid"/>
1394           <xsl:text>preceeding:</xsl:text>
1395           <xsl:value-of select="preceding-sibling::citation[1]/uuid"></xsl:value-of>
1396           <xsl:text>current:</xsl:text>
1397           <xsl:value-of select="uuid"></xsl:value-of>
1398
1399           <!--xsl:value-of select="preceding-sibling::citation/uuid"></xsl:value-of-->
1400
1401           <!--xsl:if test="$citation_uuid != $prev_citation_uuid"-->
1402           <xsl:if test="preceding-sibling::citation[1]/uuid  != uuid">
1403
1404            <!-- .[not(preceding-sibling::Link[@personId   = current()/@personId -->
1405           <xsl:choose>
1406
1407             <xsl:when test="authorTeam/teamMembers/e[1]/lastname != '' or authorTeam/lastname != ''">
1408
1409               <xsl:choose>
1410                 <xsl:when test="authorTeam/teamMembers/e[1]/lastname != ''">
1411                 <xsl:for-each select="authorTeam/teamMembers/e">
1412                   <fo:inline font-weight="bold">
1413                     <xsl:value-of select="lastname"/>
1414                     <xsl:choose>
1415                       <xsl:when test="position() != last()">
1416                         <xsl:text> &amp; </xsl:text>
1417                       </xsl:when>
1418                     </xsl:choose>
1419                   </fo:inline>
1420                 </xsl:for-each>
1421                 </xsl:when>
1422                 <xsl:otherwise test="authorTeam/lastname != ''">
1423                   <fo:inline font-weight="bold">
1424                     <xsl:value-of select="authorTeam/lastname"/>
1425                   </fo:inline>
1426                 </xsl:otherwise>
1427               </xsl:choose>
1428
1429               <xsl:if test="datePublished/start != ''">
1430                 <xsl:text> (</xsl:text>
1431                 <xsl:value-of select="datePublished/start"/>
1432                 <xsl:text>) </xsl:text>
1433               </xsl:if>
1434               <xsl:value-of select="title"/>
1435               <xsl:text>.</xsl:text>
1436               <xsl:value-of select="pages"/>
1437               <xsl:text>.</xsl:text>
1438
1439               <!-- new line for the end of the section -->
1440               <xsl:text>&#xA;</xsl:text>
1441
1442             </xsl:when>
1443             <!--xsl:otherwise>
1444               <xsl:text>HELLO&#xA;</xsl:text>
1445             </xsl:otherwise-->
1446           </xsl:choose>
1447           </xsl:if>
1448
1449         </fo:inline>
1450
1451     </fo:block>
1452     <xsl:text>&#xA;</xsl:text>
1453       </xsl:for-each>
1454
1455
1456
1457
1458   </xsl:template>
1459
1460   <xsl:template match="typeDesignations">
1461     <xsl:for-each select="child::*">
1462       <fo:inline>
1463
1464         <xsl:choose>
1465           <xsl:when test="class='SpecimenTypeDesignation'">
1466             <xsl:text> - Typus: </xsl:text>
1467             <xsl:value-of select="typeSpecimen/titleCache"/>
1468           </xsl:when>
1469           <xsl:when test="class='NameTypeDesignation'">
1470             <xsl:text> - Typus: </xsl:text>
1471             <xsl:value-of select="typeName/titleCache"/>
1472           </xsl:when>
1473         </xsl:choose>
1474       </fo:inline>
1475     </xsl:for-each>
1476   </xsl:template>
1477
1478
1479 </xsl:stylesheet>