cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/jaxb/DataSet.java

   1 /**
   2 * Copyright (C) 2008 EDIT
   3 * European Distributed Institute of Taxonomy
   4 * http://www.e-taxonomy.eu
   5  *
   6  * The contents of this file are subject to the Mozilla Public License Version 1.1
   7  * See LICENSE.TXT at the top of this package for the full license terms.
   8 */
   9
  10 package eu.etaxonomy.cdm.io.jaxb;
  11
  12 import java.util.ArrayList;
  13 import java.util.Collection;
  14 import java.util.List;
  15
  16 import javax.xml.bind.annotation.XmlAccessType;
  17 import javax.xml.bind.annotation.XmlAccessorType;
  18 import javax.xml.bind.annotation.XmlElement;
  19 import javax.xml.bind.annotation.XmlElementWrapper;
  20 import javax.xml.bind.annotation.XmlElements;
  21 import javax.xml.bind.annotation.XmlRootElement;
  22 import javax.xml.bind.annotation.XmlType;
  23
  24 import org.springframework.security.core.GrantedAuthority;
  25
  26 import eu.etaxonomy.cdm.io.common.IExportData;
  27 import eu.etaxonomy.cdm.model.agent.AgentBase;
  28 import eu.etaxonomy.cdm.model.agent.Institution;
  29 import eu.etaxonomy.cdm.model.agent.Person;
  30 import eu.etaxonomy.cdm.model.agent.Team;
  31 import eu.etaxonomy.cdm.model.common.AnnotationType;
  32 import eu.etaxonomy.cdm.model.common.DefinedTerm;
  33 import eu.etaxonomy.cdm.model.common.DefinedTermBase;
  34 import eu.etaxonomy.cdm.model.common.EventBase;
  35 import eu.etaxonomy.cdm.model.common.ExtensionType;
  36 import eu.etaxonomy.cdm.model.common.GrantedAuthorityImpl;
  37 import eu.etaxonomy.cdm.model.common.Group;
  38 import eu.etaxonomy.cdm.model.common.Language;
  39 import eu.etaxonomy.cdm.model.common.LanguageString;
  40 import eu.etaxonomy.cdm.model.common.MarkerType;
  41 import eu.etaxonomy.cdm.model.common.OrderedTermVocabulary;
  42 import eu.etaxonomy.cdm.model.common.TermVocabulary;
  43 import eu.etaxonomy.cdm.model.common.User;
  44 import eu.etaxonomy.cdm.model.description.Feature;
  45 import eu.etaxonomy.cdm.model.description.FeatureTree;
  46 import eu.etaxonomy.cdm.model.description.MeasurementUnit;
  47 import eu.etaxonomy.cdm.model.description.MediaKey;
  48 import eu.etaxonomy.cdm.model.description.PolytomousKey;
  49 import eu.etaxonomy.cdm.model.description.PresenceAbsenceTerm;
  50 import eu.etaxonomy.cdm.model.description.State;
  51 import eu.etaxonomy.cdm.model.description.StatisticalMeasure;
  52 import eu.etaxonomy.cdm.model.description.TextFormat;
  53 import eu.etaxonomy.cdm.model.location.Country;
  54 import eu.etaxonomy.cdm.model.location.NamedArea;
  55 import eu.etaxonomy.cdm.model.location.NamedAreaLevel;
  56 import eu.etaxonomy.cdm.model.location.NamedAreaType;
  57 import eu.etaxonomy.cdm.model.location.ReferenceSystem;
  58 import eu.etaxonomy.cdm.model.media.Media;
  59 import eu.etaxonomy.cdm.model.media.RightsType;
  60 import eu.etaxonomy.cdm.model.molecular.DnaSample;
  61 import eu.etaxonomy.cdm.model.molecular.PhylogeneticTree;
  62 import eu.etaxonomy.cdm.model.name.BacterialName;
  63 import eu.etaxonomy.cdm.model.name.BotanicalName;
  64 import eu.etaxonomy.cdm.model.name.CultivarPlantName;
  65 import eu.etaxonomy.cdm.model.name.HomotypicalGroup;
  66 import eu.etaxonomy.cdm.model.name.HybridRelationshipType;
  67 import eu.etaxonomy.cdm.model.name.NameRelationshipType;
  68 import eu.etaxonomy.cdm.model.name.NameTypeDesignation;
  69 import eu.etaxonomy.cdm.model.name.NameTypeDesignationStatus;
  70 import eu.etaxonomy.cdm.model.name.NomenclaturalCode;
  71 import eu.etaxonomy.cdm.model.name.NomenclaturalStatusType;
  72 import eu.etaxonomy.cdm.model.name.NonViralName;
  73 import eu.etaxonomy.cdm.model.name.Rank;
  74 import eu.etaxonomy.cdm.model.name.SpecimenTypeDesignation;
  75 import eu.etaxonomy.cdm.model.name.SpecimenTypeDesignationStatus;
  76 import eu.etaxonomy.cdm.model.name.TaxonNameBase;
  77 import eu.etaxonomy.cdm.model.name.TypeDesignationBase;
  78 import eu.etaxonomy.cdm.model.name.ViralName;
  79 import eu.etaxonomy.cdm.model.name.ZoologicalName;
  80 import eu.etaxonomy.cdm.model.occurrence.DerivationEvent;
  81 import eu.etaxonomy.cdm.model.occurrence.DerivationEventType;
  82 import eu.etaxonomy.cdm.model.occurrence.DerivedUnit;
  83 import eu.etaxonomy.cdm.model.occurrence.FieldUnit;
  84 import eu.etaxonomy.cdm.model.occurrence.GatheringEvent;
  85 import eu.etaxonomy.cdm.model.occurrence.PreservationMethod;
  86 import eu.etaxonomy.cdm.model.occurrence.SpecimenOrObservationBase;
  87 import eu.etaxonomy.cdm.model.reference.Reference;
  88 import eu.etaxonomy.cdm.model.taxon.Classification;
  89 import eu.etaxonomy.cdm.model.taxon.Synonym;
  90 import eu.etaxonomy.cdm.model.taxon.SynonymType;
  91 import eu.etaxonomy.cdm.model.taxon.Taxon;
  92 import eu.etaxonomy.cdm.model.taxon.TaxonBase;
  93 import eu.etaxonomy.cdm.model.taxon.TaxonNode;
  94 import eu.etaxonomy.cdm.model.taxon.TaxonRelationshipType;
  95
  96 /**
  97  * @author a.babadshanjan
  98  */
  99 @XmlAccessorType(XmlAccessType.FIELD)
 100 @XmlType(name = "DataSet", propOrder = {
 101             "terms",
 102             "termVocabularies",
 103                 "agents",
 104                 "collections",
 105                 "occurrences",
 106                 "eventBases",
 107             "references",
 108             "typeDesignations",
 109             "featureTrees",
 110             "polytomousKeys",
 111             "taxonNodes",
 112             "classifications",
 113             "taxonomicNames",
 114             "homotypicalGroups",
 115             "taxonBases",
 116             "media",
 117             "users",
 118             "groups",
 119             "grantedAuthorities",
 120             "languageStrings"
 121 })
 122 @XmlRootElement(name = "DataSet")
 123 public class DataSet implements IExportData {
 124
 125         @XmlElementWrapper(name = "Terms")
 126     @XmlElements({
 127         @XmlElement(name = "AnnotationType", namespace = "http://etaxonomy.eu/cdm/model/common/1.0", type = AnnotationType.class),
 128         @XmlElement(name = "Continent", namespace = "http://etaxonomy.eu/cdm/model/location/1.0", type = NamedArea.class),
 129         @XmlElement(name = "DerivationEventType", namespace = "http://etaxonomy.eu/cdm/model/occurrence/1.0", type = DerivationEventType.class),
 130         @XmlElement(name = "DeterminationModifier", namespace = "http://etaxonomy.eu/cdm/model/occurrence/1.0", type = DefinedTerm.class),
 131         @XmlElement(name = "ExtensionType", namespace = "http://etaxonomy.eu/cdm/model/common/1.0", type = ExtensionType.class),
 132         @XmlElement(name = "Feature", namespace = "http://etaxonomy.eu/cdm/model/description/1.0", type = Feature.class),
 133         @XmlElement(name = "HybridRelationshipType", namespace = "http://etaxonomy.eu/cdm/model/name/1.0", type = HybridRelationshipType.class),
 134         @XmlElement(name = "InstitutionType", namespace = "http://etaxonomy.eu/cdm/model/agent/1.0", type = DefinedTerm.class),
 135         @XmlElement(name = "Language", namespace = "http://etaxonomy.eu/cdm/model/common/1.0", type = Language.class),
 136         @XmlElement(name = "MarkerType", namespace = "http://etaxonomy.eu/cdm/model/common/1.0", type = MarkerType.class),
 137         @XmlElement(name = "MeasurementUnit", namespace = "http://etaxonomy.eu/cdm/model/description/1.0", type = MeasurementUnit.class),
 138         @XmlElement(name = "Modifier", namespace = "http://etaxonomy.eu/cdm/model/description/1.0", type = DefinedTerm.class),
 139         @XmlElement(name = "NamedArea", namespace = "http://etaxonomy.eu/cdm/model/location/1.0", type = NamedArea.class),
 140         @XmlElement(name = "NamedAreaLevel", namespace = "http://etaxonomy.eu/cdm/model/location/1.0", type = NamedAreaLevel.class),
 141         @XmlElement(name = "NamedAreaType", namespace = "http://etaxonomy.eu/cdm/model/location/1.0", type = NamedAreaType.class),
 142         @XmlElement(name = "NameRelationshipType", namespace = "http://etaxonomy.eu/cdm/model/name/1.0", type = NameRelationshipType.class),
 143         @XmlElement(name = "NameTypeDesignationStatus", namespace = "http://etaxonomy.eu/cdm/model/name/1.0", type = NameTypeDesignationStatus.class),
 144         @XmlElement(name = "NomenclaturalCode", namespace = "http://etaxonomy.eu/cdm/model/name/1.0", type = NomenclaturalCode.class),
 145         @XmlElement(name = "NomenclaturalStatusType", namespace = "http://etaxonomy.eu/cdm/model/name/1.0", type = NomenclaturalStatusType.class),
 146         @XmlElement(name = "PresenceAbsenceTerm", namespace = "http://etaxonomy.eu/cdm/model/description/1.0", type = PresenceAbsenceTerm.class),
 147         @XmlElement(name = "PreservationMethod", namespace = "http://etaxonomy.eu/cdm/model/occurrence/1.0", type = PreservationMethod.class),
 148         @XmlElement(name = "Rank", namespace = "http://etaxonomy.eu/cdm/model/name/1.0", type = Rank.class),
 149         @XmlElement(name = "ReferenceSystem", namespace = "http://etaxonomy.eu/cdm/model/location/1.0", type = ReferenceSystem.class),
 150         @XmlElement(name = "RightsType", namespace = "http://etaxonomy.eu/cdm/model/media/1.0", type = RightsType.class),
 151         @XmlElement(name = "Scope", namespace = "http://etaxonomy.eu/cdm/model/description/1.0", type = DefinedTerm.class),
 152         @XmlElement(name = "Sex", namespace = "http://etaxonomy.eu/cdm/model/description/1.0", type = DefinedTerm.class),
 153         @XmlElement(name = "SpecimenTypeDesignationStatus", namespace = "http://etaxonomy.eu/cdm/model/name/1.0", type = SpecimenTypeDesignationStatus.class),
 154         @XmlElement(name = "Stage", namespace = "http://etaxonomy.eu/cdm/model/description/1.0", type = DefinedTerm.class),
 155         @XmlElement(name = "State", namespace = "http://etaxonomy.eu/cdm/model/description/1.0", type = State.class),
 156         @XmlElement(name = "StatisticalMeasure", namespace = "http://etaxonomy.eu/cdm/model/description/1.0", type = StatisticalMeasure.class),
 157         @XmlElement(name = "SynonymType", namespace = "http://etaxonomy.eu/cdm/model/taxon/1.0", type = SynonymType.class),
 158         @XmlElement(name = "TaxonRelationshipType", namespace = "http://etaxonomy.eu/cdm/model/taxon/1.0", type = TaxonRelationshipType.class),
 159         //      @XmlElement(name = "TdwgArea", namespace = "http://etaxonomy.eu/cdm/model/location/1.0", type = TdwgArea.class),
 160         @XmlElement(name = "TextFormat", namespace = "http://etaxonomy.eu/cdm/model/description/1.0", type = TextFormat.class),
 161         @XmlElement(name = "Country", namespace = "http://etaxonomy.eu/cdm/model/location/1.0", type = Country.class)
 162
 163     })
 164     protected List<DefinedTermBase> terms = new ArrayList<DefinedTermBase>();
 165
 166         @XmlElementWrapper(name = "TermVocabularies")
 167     @XmlElements({
 168         @XmlElement(name = "TermVocabulary", namespace = "http://etaxonomy.eu/cdm/model/common/1.0", type = TermVocabulary.class),
 169         @XmlElement(name = "OrderedTermVocabulary", namespace = "http://etaxonomy.eu/cdm/model/common/1.0", type = OrderedTermVocabulary.class)
 170     })
 171
 172     protected List<TermVocabulary<DefinedTermBase>> termVocabularies = new ArrayList<TermVocabulary<DefinedTermBase>>();
 173
 174
 175     @XmlElementWrapper(name = "Agents")
 176     @XmlElements({
 177         @XmlElement(name = "Team", namespace = "http://etaxonomy.eu/cdm/model/agent/1.0", type = Team.class),
 178         @XmlElement(name = "Institution", namespace = "http://etaxonomy.eu/cdm/model/agent/1.0", type = Institution.class),
 179         @XmlElement(name = "Person", namespace = "http://etaxonomy.eu/cdm/model/agent/1.0", type = Person.class)
 180     })
 181     protected List<AgentBase> agents = new ArrayList<AgentBase>();
 182
 183
 184     @XmlElementWrapper(name = "Collections")
 185     @XmlElement(name = "Collection", namespace = "http://etaxonomy.eu/cdm/model/occurrence/1.0")
 186     protected List<eu.etaxonomy.cdm.model.occurrence.Collection> collections = new ArrayList<eu.etaxonomy.cdm.model.occurrence.Collection>();
 187
 188     @XmlElementWrapper(name = "FeatureTrees")
 189     @XmlElements({
 190       @XmlElement(name = "FeatureTree", namespace = "http://etaxonomy.eu/cdm/model/description/1.0", type = FeatureTree.class)
 191     })
 192     protected List<FeatureTree> featureTrees = new ArrayList<FeatureTree>();
 193
 194     @XmlElementWrapper(name = "PolytomousKeys")
 195     @XmlElements({
 196       @XmlElement(name = "PolytomousKey", namespace = "http://etaxonomy.eu/cdm/model/description/1.0", type = PolytomousKey.class)
 197     })
 198     protected List<PolytomousKey> polytomousKeys = new ArrayList<PolytomousKey>();
 199
 200
 201     @XmlElementWrapper(name = "Classifications")
 202     @XmlElement(name = "Classification", namespace = "http://etaxonomy.eu/cdm/model/taxon/1.0")
 203     protected List<Classification> classifications = new ArrayList<Classification>();
 204
 205     @XmlElementWrapper(name = "TaxonNodes")
 206     @XmlElement(name = "TaxonNodes", namespace = "http://etaxonomy.eu/cdm/model/taxon/1.0")
 207     protected List<TaxonNode> taxonNodes = new ArrayList<TaxonNode>();
 208
 209     protected List<LanguageString> languageStrings =new ArrayList<LanguageString>();
 210
 211
 212     @XmlElementWrapper(name = "Occurrences")
 213     @XmlElements({
 214         @XmlElement(name = "DerivedUnit", namespace = "http://etaxonomy.eu/cdm/model/occurrence/1.0", type = DerivedUnit.class),
 215         @XmlElement(name = "DnaSample", namespace = "http://etaxonomy.eu/cdm/model/occurrence/1.0", type = DnaSample.class),
 216         @XmlElement(name = "FieldUnit", namespace = "http://etaxonomy.eu/cdm/model/occurrence/1.0", type = FieldUnit.class)
 217     })
 218     protected List<SpecimenOrObservationBase> occurrences = new ArrayList<SpecimenOrObservationBase>();
 219
 220     @XmlElementWrapper(name = "EventBases")
 221     @XmlElements({
 222         @XmlElement(name = "DerivationEvent", namespace = "http://etaxonomy.eu/cdm/model/occurrence/1.0", type = DerivationEvent.class),
 223         @XmlElement(name = "GatheringEvent", namespace = "http://etaxonomy.eu/cdm/model/occurrence/1.0", type = GatheringEvent.class)
 224     })
 225     protected List<EventBase> eventBases = new ArrayList<EventBase>();
 226
 227     @XmlElementWrapper(name = "References")
 228     @XmlElements({
 229         @XmlElement(name = "Reference", namespace = "http://etaxonomy.eu/cdm/model/reference/1.0", type = Reference.class)
 230     })
 231     protected List<Reference> references = new ArrayList<Reference>();
 232
 233     @XmlElementWrapper(name = "TypeDesignations")
 234     @XmlElements({
 235         @XmlElement(name = "NameTypeDesignation", namespace = "http://etaxonomy.eu/cdm/model/name/1.0", type = NameTypeDesignation.class),
 236         @XmlElement(name = "SpecimenTypeDesignation", namespace = "http://etaxonomy.eu/cdm/model/name/1.0", type = SpecimenTypeDesignation.class)
 237     })
 238     protected List<TypeDesignationBase> typeDesignations = new ArrayList<TypeDesignationBase>();
 239
 240     @XmlElementWrapper(name = "TaxonomicNames")
 241     @XmlElements({
 242         @XmlElement(name = "BacterialName", namespace = "http://etaxonomy.eu/cdm/model/name/1.0", type = BacterialName.class),
 243         @XmlElement(name = "BotanicalName", namespace = "http://etaxonomy.eu/cdm/model/name/1.0", type = BotanicalName.class),
 244         @XmlElement(name = "CultivarPlantName", namespace = "http://etaxonomy.eu/cdm/model/name/1.0", type = CultivarPlantName.class),
 245         @XmlElement(name = "NonViralName", namespace = "http://etaxonomy.eu/cdm/model/name/1.0", type = NonViralName.class),
 246         @XmlElement(name = "ViralName", namespace = "http://etaxonomy.eu/cdm/model/name/1.0", type = ViralName.class),
 247         @XmlElement(name = "ZoologicalName", namespace = "http://etaxonomy.eu/cdm/model/name/1.0", type = ZoologicalName.class)
 248     })
 249     protected List<TaxonNameBase> taxonomicNames = new ArrayList<TaxonNameBase>();
 250
 251     @XmlElementWrapper(name = "TaxonBases")
 252     @XmlElements({
 253       @XmlElement(name = "Taxon", namespace = "http://etaxonomy.eu/cdm/model/taxon/1.0", type = Taxon.class),
 254       @XmlElement(name = "Synonym", namespace = "http://etaxonomy.eu/cdm/model/taxon/1.0", type = Synonym.class)
 255     })
 256     protected List<TaxonBase<?>> taxonBases = new ArrayList<TaxonBase<?>>();
 257
 258     @XmlElementWrapper(name = "Media")
 259     @XmlElements({
 260       @XmlElement(name = "Media", namespace = "http://etaxonomy.eu/cdm/model/media/1.0", type = Media.class),
 261       @XmlElement(name = "MediaKey", namespace = "http://etaxonomy.eu/cdm/model/description/1.0", type = MediaKey.class),
 262       @XmlElement(name = "PhylogeneticTree", namespace = "http://etaxonomy.eu/cdm/model/molecular/1.0", type = PhylogeneticTree.class)
 263     })
 264     protected List<Media> media = new ArrayList<Media>();
 265
 266     @XmlElementWrapper(name = "HomotypicalGroups")
 267     @XmlElement(name = "HomotypicalGroup", namespace = "http://etaxonomy.eu/cdm/model/name/1.0")
 268     protected List<HomotypicalGroup> homotypicalGroups = new ArrayList<HomotypicalGroup>();
 269
 270     @XmlElementWrapper(name = "Users")
 271     @XmlElement(name = "User", namespace = "http://etaxonomy.eu/cdm/model/common/1.0")
 272     protected List<User> users = new ArrayList<User>();
 273
 274     @XmlElementWrapper(name = "Groups")
 275     @XmlElement(name = "Group", namespace = "http://etaxonomy.eu/cdm/model/common/1.0")
 276     protected List<Group> groups = new ArrayList<Group>();
 277
 278     @XmlElementWrapper(name = "GrantedAuthorities")
 279     @XmlElement(name = "GrantedAuthority", namespace = "http://etaxonomy.eu/cdm/model/common/1.0", type = GrantedAuthorityImpl.class)
 280     protected List<GrantedAuthority> grantedAuthorities = new ArrayList<GrantedAuthority>();
 281
 282     /**
 283      * Gets the value of the agents property.
 284      *
 285      * @return
 286      *     possible object is
 287      *     {@link List<Agent> }
 288      *
 289      */
 290     public List<AgentBase> getAgents() {
 291         return agents;
 292     }
 293
 294     /**
 295      * Sets the value of the agents property.
 296      *
 297      * @param value
 298      *     allowed object is
 299      *     {@link List<Agent> }
 300      *
 301      */
 302     public void setAgents(List<AgentBase> value) {
 303         this.agents = value;
 304     }
 305
 306     /**
 307      * Gets the value of the collections property.
 308      *
 309      * @return
 310      *     possible object is
 311      *     {@link List<eu.etaxonomy.cdm.model.occurrence.Collection> }
 312      *
 313      */
 314     public List<eu.etaxonomy.cdm.model.occurrence.Collection> getCollections() {
 315         return collections;
 316     }
 317
 318     /**
 319      * Sets the value of the collections property.
 320      *
 321      * @param value
 322      *     allowed object is
 323      *     {@link List<eu.etaxonomy.cdm.model.occurrence.Collection> }
 324      *
 325      */
 326     public void setCollections(List<eu.etaxonomy.cdm.model.occurrence.Collection> value) {
 327         this.collections = value;
 328     }
 329
 330     /**
 331      * Gets the value of the terms property.
 332      *
 333      * @return
 334      *     possible object is
 335      *     {@link List<TermBase> }
 336      *
 337      */
 338     public List<DefinedTermBase> getTerms() {
 339         return terms;
 340     }
 341
 342     /**
 343      * Sets the value of the terms property.
 344      *
 345      * @param value
 346      *     allowed object is
 347      *     {@link List<TermBase> }
 348      *
 349      */
 350     public void setTerms(List<DefinedTermBase> value) {
 351         this.terms = value;
 352     }
 353
 354     /**
 355      * Gets the value of the term vocabularies property.
 356      *
 357      * @return
 358      *     possible object is
 359      *     {@link List<TermVocabulary> }
 360      *
 361      */
 362
 363     public List<TermVocabulary<DefinedTermBase>> getTermVocabularies() {
 364         return termVocabularies;
 365     }
 366
 367     /**
 368      * Sets the value of the term vocabularies property.
 369      *
 370      * @param value
 371      *     allowed object is
 372      *     {@link List<TermVocabulary> }
 373      *
 374      */
 375     public void setTermVocabularies(List<TermVocabulary<DefinedTermBase>> value) {
 376         this.termVocabularies = value;
 377     }
 378
 379
 380
 381     /**
 382      * Gets the value of the taxonomicNames property.
 383      *
 384      * @return
 385      *     possible object is
 386      *     {@link List<axonNameBase> }
 387      *
 388      */
 389     public List<TaxonNameBase> getTaxonomicNames() {
 390         return taxonomicNames;
 391     }
 392
 393     /**
 394      * Sets the value of the taxonomicNames property.
 395      *
 396      * @param value
 397      *     allowed object is
 398      *     {@link List<TaxonNameBase> }
 399      *
 400      */
 401     public void setTaxonomicNames(List<TaxonNameBase> value) {
 402         this.taxonomicNames = value;
 403     }
 404
 405     /**
 406      * Gets the value of the eventBases property.
 407      *
 408      * @return
 409      *     possible object is
 410      *     {@link List<EventBase> }
 411      *
 412      */
 413     public List<EventBase> getEventBases() {
 414         return eventBases;
 415     }
 416
 417     /**
 418      * Sets the value of the eventBases property.
 419      *
 420      * @param value
 421      *     allowed object is
 422      *     {@link List<EventBase> }
 423      *
 424      */
 425     public void setEventBases(List<EventBase> value) {
 426         this.eventBases = value;
 427     }
 428
 429     /**
 430      * Gets the value of the occurrences property.
 431      *
 432      * @return
 433      *     possible object is
 434      *     {@link List<SpecimenOrObservationBase> }
 435      *
 436      */
 437     public List<SpecimenOrObservationBase> getOccurrences() {
 438         return occurrences;
 439     }
 440
 441     /**
 442      * Sets the value of the occurrences property.
 443      *
 444      * @param value
 445      *     allowed object is
 446      *     {@link List<SpecimenOrObservationBase> }
 447      *
 448      */
 449     public void setOccurrences(List<SpecimenOrObservationBase> value) {
 450         this.occurrences = value;
 451     }
 452     /*
 453     * Gets the value of the occurrences property.
 454     *
 455     * @return
 456     *     possible object is
 457     *     {@link List<LanguageStringBase> }
 458     *
 459     */
 460    public List<LanguageString> getLanguageStrings() {
 461        return languageStrings;
 462    }
 463
 464    /**
 465     * Sets the value of the occurrences property.
 466     *
 467     * @param value
 468     *     allowed object is
 469     *     {@link List<SpecimenOrObservationBase> }
 470     *
 471     */
 472    public void setLanguageStrings(List<LanguageString> value) {
 473        this.languageStrings = value;
 474    }
 475     /**
 476      * Gets the value of the references property.
 477      *
 478      * @return
 479      *     possible object is
 480      *     {@link List<Reference> }
 481      *
 482      */
 483     public List<Reference> getReferences() {
 484         return references;
 485     }
 486
 487     /**
 488      * Sets the value of the references property.
 489      *
 490      * @param value
 491      *     allowed object is
 492      *     {@link List<Reference> }
 493      *
 494      */
 495     public void setReferences(List<Reference> value) {
 496         this.references = value;
 497     }
 498
 499     /**
 500      * Gets the value of the featureTrees property.
 501      *
 502      * @return
 503      *     possible object is
 504      *     {@link List<FeatureTree> }
 505      *
 506      */
 507     public List<FeatureTree> getFeatureTrees() {
 508         return featureTrees;
 509     }
 510
 511
 512     /**
 513      * Gets the value of the polytomousKeys property.
 514      *
 515      * @return
 516      *     possible object is
 517      *     {@link List<PolytomousKey> }
 518      *
 519      */
 520     public List<PolytomousKey> getPolytomousKeys() {
 521         return polytomousKeys;
 522     }
 523
 524     /**
 525      * Sets the value of the featureTrees property.
 526      *
 527      * @param value
 528      *     allowed object is
 529      *     {@link List<FeatureTree> }
 530      *
 531      */
 532     public void setClassifications(List<Classification> value) {
 533         this.classifications = value;
 534     }
 535
 536
 537     /**
 538      * Gets the value of the featureTrees property.
 539      *
 540      * @return
 541      *     possible object is
 542      *     {@link List<FeatureTree> }
 543      *
 544      */
 545     public List<Classification> getClassifications() {
 546         return classifications;
 547     }
 548     /**
 549      * Sets the value of the featureTrees property.
 550      *
 551      * @param value
 552      *     allowed object is
 553      *     {@link List<FeatureTree> }
 554      *
 555      */
 556     public void setTaxonNodes(List<TaxonNode> value) {
 557         this.taxonNodes = value;
 558     }
 559
 560
 561     /**
 562      * Gets the value of the featureTrees property.
 563      *
 564      * @return
 565      *     possible object is
 566      *     {@link List<FeatureTree> }
 567      *
 568      */
 569     public List<TaxonNode> getTaxonNodes() {
 570         return taxonNodes;
 571     }
 572
 573     /**
 574      * Sets the value of the featureTrees property.
 575      *
 576      * @param value
 577      *     allowed object is
 578      *     {@link List<FeatureTree> }
 579      *
 580      */
 581     public void setFeatureTrees(List<FeatureTree> value) {
 582         this.featureTrees = value;
 583     }
 584
 585     /**
 586      * Sets the value of the polytomousKeys property.
 587      *
 588      * @param value
 589      *     allowed object is
 590      *     {@link List<PolytomousKey> }
 591      *
 592      */
 593     public void setPolytomousKeys(List<PolytomousKey> value) {
 594         this.polytomousKeys = value;
 595     }
 596
 597     /**
 598      * Adds the taxonBases in value to the taxonBases property list.
 599      *
 600      * @param value
 601      *     allowed object is
 602      *     {@link Collection<TaxonBase> }
 603      *
 604      */
 605     public void addTaxonBases(Collection<TaxonBase<?>> value) {
 606         this.taxonBases.addAll(value);
 607     }
 608
 609     /**
 610      * Gets the value of the taxonBases property as {@link Collection<TaxonBase> }
 611      *
 612      * @return
 613      *     possible object is
 614      *     {@link List<TaxonBase> }
 615      *
 616      */
 617     public List<TaxonBase<?>> getTaxonBases() {
 618         return taxonBases;
 619     }
 620
 621     /**
 622      * Sets the value of the taxonBases property.
 623      *
 624      * @param value
 625      *     allowed object is
 626      *     {@link List<TaxonBase> }
 627      *
 628      */
 629     public void setTaxonBases(List<TaxonBase<?>> value) {
 630         this.taxonBases = value;
 631     }
 632
 633     /**
 634      * Adds the taxonBase in value to the taxonBases property list.
 635      *
 636      * @param value
 637      *
 638      */
 639     public void addTaxonBase(TaxonBase value) {
 640                 this.taxonBases.add(value);
 641     }
 642
 643     /**
 644      * Adds the media in value to the media property list.
 645      *
 646      * @param value
 647      *     allowed object is
 648      *     {@link Collection<VersionableEntity> }
 649      *
 650      */
 651     public <T extends Media> void addMedia(Collection<T> value) {
 652         for (T medium: value) {
 653                 this.media.add(medium);
 654         }
 655     }
 656
 657     /**
 658      * Gets the value of the  property.
 659      *
 660      * @return
 661      *     possible object is
 662      *     {@link List<ReferencedEntityBase> }
 663      *
 664      */
 665     public List<Media> getMedia() {
 666         return media;
 667     }
 668
 669     /**
 670      * Sets the value of the referencedEntities property.
 671      *
 672      * @param value
 673      *     allowed object is
 674      *     {@link List<ReferencedEntityBase> }
 675      *
 676      */
 677     public void setMedia(List<Media> value) {
 678         this.media = new ArrayList<Media>();
 679         media.addAll(value);
 680     }
 681
 682     /**
 683      * Gets the value of the synonyms property.
 684      *
 685      * @return
 686      *     possible object is
 687      *     {@link List<Synonym> }
 688      *
 689      */
 690     public List<HomotypicalGroup> getHomotypicalGroups() {
 691         return homotypicalGroups;
 692     }
 693
 694     /**
 695      * Sets the value of the synonyms property.
 696      *
 697      * @param value
 698      *     allowed object is
 699      *     {@link List<Synonym> }
 700      *
 701      */
 702     public void setHomotypicalGroups(List<HomotypicalGroup> value) {
 703         this.homotypicalGroups = value;
 704     }
 705
 706     /**
 707      * Gets the value of the typeDesignations property.
 708      *
 709      * @return
 710      *     possible object is
 711      *     {@link List<TypeDesignationBase> }
 712      *
 713      */
 714     public List<TypeDesignationBase> getTypeDesignations() {
 715         return typeDesignations;
 716     }
 717
 718     /**
 719      * Sets the value of the typeDesignations property.
 720      *
 721      * @param value
 722      *     allowed object is
 723      *     {@link List<TypeDesignationBase> }
 724      *
 725      */
 726         public void addTypeDesignations(List<TypeDesignationBase> typeDesignations) {
 727                 this.typeDesignations.addAll(typeDesignations);
 728         }
 729
 730         /**
 731      * Gets the value of the users property.
 732      *
 733      * @return
 734      *     possible object is
 735      *     {@link List<User> }
 736      *
 737      */
 738         public List<User> getUsers() {
 739                 return users;
 740         }
 741
 742         /**
 743      * Sets the value of the users property.
 744      *
 745      * @param value
 746      *     allowed object is
 747      *     {@link List<User> }
 748      *
 749      */
 750         public void setUsers(List<User> users) {
 751                 this.users = users;
 752         }
 753
 754         /**
 755      * Gets the value of the groups property.
 756      *
 757      * @return
 758      *     possible object is
 759      *     {@link List<Group> }
 760      *
 761      */
 762         public List<Group> getGroups() {
 763                 return groups;
 764         }
 765
 766         /**
 767      * Sets the value of the groups property.
 768      *
 769      * @param value
 770      *     allowed object is
 771      *     {@link List<Group> }
 772      *
 773      */
 774         public void setGroups(List<Group> groups) {
 775                 this.groups = groups;
 776         }
 777
 778         /**
 779      * Gets the value of the grantedAuthorities property.
 780      *
 781      * @return
 782      *     possible object is
 783      *     {@link List<GrantedAuthority> }
 784      *
 785      */
 786         public List<GrantedAuthority> getGrantedAuthorities() {
 787                 return grantedAuthorities;
 788         }
 789
 790         /**
 791      * Sets the value of the grantedAuthorities property.
 792      *
 793      * @param value
 794      *     allowed object is
 795      *     {@link List<GrantedAuthority> }
 796      *
 797      */
 798         public void setGrantedAuthorities(List<GrantedAuthority> grantedAuthorities) {
 799                 this.grantedAuthorities = grantedAuthorities;
 800         }
 801
 802         public void addUser(User deproxy) {
 803                 this.users.add(deproxy);
 804
 805         }
 806 }