cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/tcsxml/in/TcsXmlPublicationsImport.java

   1 /**
   2  *
   3  */
   4 package eu.etaxonomy.cdm.io.tcsxml.in;
   5
   6 import java.util.List;
   7 import java.util.Map;
   8
   9 import org.apache.log4j.Logger;
  10 import org.jdom.Element;
  11 import org.jdom.Namespace;
  12 import org.springframework.stereotype.Component;
  13
  14 import eu.etaxonomy.cdm.api.service.IReferenceService;
  15 import eu.etaxonomy.cdm.common.DoubleResult;
  16 import eu.etaxonomy.cdm.common.XmlHelp;
  17 import eu.etaxonomy.cdm.io.common.ICdmIO;
  18 import eu.etaxonomy.cdm.io.common.IImportConfigurator;
  19 import eu.etaxonomy.cdm.io.common.ImportHelper;
  20 import eu.etaxonomy.cdm.io.common.MapWrapper;
  21 import eu.etaxonomy.cdm.io.tcsrdf.TcsRdfImportState;
  22 import eu.etaxonomy.cdm.model.common.CdmBase;
  23 import eu.etaxonomy.cdm.model.reference.Generic;
  24 import eu.etaxonomy.cdm.model.reference.ReferenceBase;
  25
  26 /**
  27  * @author a.mueller
  28  *
  29  */
  30 @Component
  31 public class TcsXmlPublicationsImport extends TcsXmlImportBase implements ICdmIO<IImportConfigurator> {
  32         private static final Logger logger = Logger.getLogger(TcsXmlPublicationsImport.class);
  33
  34         private static int modCount = 1000;
  35
  36         public TcsXmlPublicationsImport(){
  37                 super();
  38         }
  39
  40         @Override
  41         public boolean doCheck(IImportConfigurator config){
  42                 boolean result = true;
  43                 result &= checkArticlesWithoutJournal(config);
  44                 //result &= checkPartOfJournal(config);
  45
  46                 return result;
  47         }
  48
  49         private static boolean checkArticlesWithoutJournal(IImportConfigurator bmiConfig){
  50                 try {
  51                         boolean result = true;
  52                         //TODO
  53                         //                              result = firstRow = false;
  54 //                      }
  55 //
  56                         return result;
  57                 } catch (Exception e) {
  58                         e.printStackTrace();
  59                         return false;
  60                 }
  61         }
  62
  63
  64
  65         @Override
  66         public boolean doInvoke(TcsXmlImportState state){
  67
  68                 logger.info("start make Publications ...");
  69                 boolean success = true;
  70                 String childName;
  71                 boolean obligatory;
  72
  73                 MapWrapper<ReferenceBase> referenceMap = (MapWrapper<ReferenceBase>)state.getStore(ICdmIO.REFERENCE_STORE);
  74                 IReferenceService referenceService = getReferenceService();
  75
  76                 TcsXmlImportConfigurator config = state.getConfig();
  77                 Element elDataSet = getDataSetElement(config);
  78                 Namespace tcsNamespace = config.getTcsXmlNamespace();
  79
  80                 DoubleResult<Element, Boolean> doubleResult;
  81                 childName = "Publications";
  82                 obligatory = false;
  83                 doubleResult = XmlHelp.getSingleChildElement(elDataSet, childName, tcsNamespace, obligatory);
  84                 success &= doubleResult.getSecondResult();
  85                 Element elPublications = doubleResult.getFirstResult();
  86
  87                 String tcsElementName = "Publication";
  88                 String idNamespace = "Publication";
  89                 List<Element> elPublicationList = elPublications.getChildren(tcsElementName, tcsNamespace);
  90
  91                 int i = 0;
  92                 //for each taxonName
  93                 for (Element elPublication : elPublicationList){
  94                         if ((++i % modCount) == 0){ logger.info("publications handled: " + (i-1));}
  95
  96                         //create TaxonName element
  97                         String strId = elPublication.getAttributeValue("id");
  98
  99                         childName = "Simple";
 100                         obligatory = true;
 101                         doubleResult = XmlHelp.getSingleChildElement(elPublication, childName, tcsNamespace, obligatory);
 102                         success &= doubleResult.getSecondResult();
 103                         Element elSimple = doubleResult.getFirstResult();
 104
 105                         String simple = elSimple.getTextNormalize();
 106                         ReferenceBase reference = Generic.NewInstance();
 107                         reference.setTitleCache(simple);
 108
 109                         childName = "PublicationDetailed";
 110                         obligatory = false;
 111                         doubleResult =  XmlHelp.getSingleChildElement(elPublication, childName, tcsNamespace, obligatory);
 112                         success &= doubleResult.getSecondResult();
 113                         Element elPublicationDetailed = doubleResult.getFirstResult();
 114
 115                         success &= config.getPlaceholderClass().makePublicationDetailed(config, elPublicationDetailed, reference);
 116                         ImportHelper.setOriginalSource(reference, config.getSourceReference(), strId, idNamespace);
 117
 118                         referenceMap.put(strId, reference);
 119
 120
 121                 }
 122 //              //save and store in map
 123 //              logger.info("Save nomenclatural references (" + nomRefCount + ")");
 124 //              referenceService.saveReferenceAll(nomRefMap.objects());
 125                 logger.info("Save bibliographical references (" + i +")");
 126                 referenceService.saveReferenceAll(referenceMap.objects());
 127
 128                 logger.info("end make publications ...");
 129                 return success;
 130         }
 131
 132         /* (non-Javadoc)
 133          * @see eu.etaxonomy.cdm.io.common.CdmIoBase#isIgnore(eu.etaxonomy.cdm.io.common.IImportConfigurator)
 134          */
 135         protected boolean isIgnore(IImportConfigurator config){
 136                 return (config.getDoReferences() == IImportConfigurator.DO_REFERENCES.NONE);
 137         }
 138
 139 }