cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/excel/taxa/TaxonExcelImporterBase.java

   1 /**
   2  *
   3  */
   4 package eu.etaxonomy.cdm.io.excel.taxa;
   5
   6 import java.net.URI;
   7 import java.net.URISyntaxException;
   8 import java.util.ArrayList;
   9 import java.util.HashMap;
  10 import java.util.Map;
  11
  12 import org.apache.log4j.Logger;
  13 import org.springframework.transaction.TransactionStatus;
  14
  15 import eu.etaxonomy.cdm.api.application.CdmApplicationController;
  16 import eu.etaxonomy.cdm.common.CdmUtils;
  17 import eu.etaxonomy.cdm.common.ExcelUtils;
  18 import eu.etaxonomy.cdm.database.ICdmDataSource;
  19 import eu.etaxonomy.cdm.io.common.CdmIoBase;
  20 import eu.etaxonomy.cdm.io.common.IImportConfigurator;
  21 import eu.etaxonomy.cdm.io.common.IIoConfigurator;
  22 import eu.etaxonomy.cdm.io.common.MapWrapper;
  23 import eu.etaxonomy.cdm.io.excel.common.ExcelImporterBase;
  24 import eu.etaxonomy.cdm.io.excel.taxa.NormalExplicitImporter;
  25 import eu.etaxonomy.cdm.io.jaxb.JaxbImportConfigurator;
  26 import eu.etaxonomy.cdm.model.agent.Person;
  27 import eu.etaxonomy.cdm.model.common.CdmBase;
  28 import eu.etaxonomy.cdm.model.common.Language;
  29 import eu.etaxonomy.cdm.model.description.TaxonDescription;
  30 import eu.etaxonomy.cdm.model.name.NomenclaturalStatus;
  31 import eu.etaxonomy.cdm.model.name.Rank;
  32 import eu.etaxonomy.cdm.model.name.TaxonNameBase;
  33 import eu.etaxonomy.cdm.model.reference.ReferenceBase;
  34 import eu.etaxonomy.cdm.model.taxon.Taxon;
  35
  36 /**
  37  * @author a.babadshanjan
  38  * @created 09.01.2009
  39  * @version 1.0
  40  */
  41 public abstract class TaxonExcelImporterBase extends ExcelImporterBase {
  42
  43         private static final Logger logger = Logger.getLogger(TaxonExcelImporterBase.class);
  44
  45         /*
  46          * Supported Columns:
  47          * Id
  48          * ParentId     - create taxon relationship
  49          * Rank         - create taxon name of this rank
  50          * ScientificName
  51          * Author
  52          * NameStatus
  53          * VernacularName
  54          * Language
  55          */
  56
  57         protected static final String ID_COLUMN = "Id";
  58         protected static final String PARENT_ID_COLUMN = "ParentId";
  59         protected static final String RANK_COLUMN = "Rank";
  60         protected static final String AUTHOR_COLUMN = "Author";
  61         protected static final String NAME_STATUS_COLUMN = "NameStatus";
  62         protected static final String VERNACULAR_NAME_COLUMN = "VernacularName";
  63         protected static final String LANGUAGE_COLUMN = "Language";
  64
  65         protected enum Columns {
  66                 Id("Id"),
  67                 ParentId("ParentId"),
  68                 Rank("Rank"),
  69                 ScientificName("ScientificName"),
  70                 Author("Author"),
  71                 NameStatus("NameStatus"),
  72                 VernacularName("VernacularName"),
  73                 Language("Language");
  74
  75         private String head;
  76         private String value;
  77
  78         Columns(String head) {
  79                 this.head = head;
  80         }
  81
  82         public String head() {
  83                 return this.head;
  84         }
  85
  86         public String value() {
  87                 return this.value;
  88         }
  89         }
  90
  91         private String rank = "";
  92         private String nameStatus = "";
  93         private String commonName = "";
  94         private String author = "";
  95         private String language = "";
  96         private String reference = "";
  97         private int id = 0;
  98         private int parentId = 0;
  99
 100         /* Need already processed records? */
 101
 102         public String getRank() {
 103
 104                 return this.rank;
 105         }
 106
 107         public void setRank(String rank) {
 108
 109                 this.rank = rank;
 110         }
 111
 112         public int getId() {
 113
 114                 return this.id;
 115         }
 116
 117         public void setId(int id) {
 118
 119                 this.id = id;
 120         }
 121
 122         public int getParentId() {
 123
 124                 return this.parentId;
 125         }
 126
 127         public void setParentId(int parentId) {
 128
 129                 this.parentId = parentId;
 130         }
 131 }