cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/jaxb/DataSet.java

   1 /**
   2 * Copyright (C) 2008 EDIT
   3 * European Distributed Institute of Taxonomy
   4 * http://www.e-taxonomy.eu
   5  *
   6  * The contents of this file are subject to the Mozilla Public License Version 1.1
   7  * See LICENSE.TXT at the top of this package for the full license terms.
   8 */
   9
  10 package eu.etaxonomy.cdm.io.jaxb;
  11
  12 import java.util.ArrayList;
  13 import java.util.Collection;
  14 import java.util.List;
  15
  16 import javax.xml.bind.annotation.XmlAccessType;
  17 import javax.xml.bind.annotation.XmlAccessorType;
  18 import javax.xml.bind.annotation.XmlElement;
  19 import javax.xml.bind.annotation.XmlElementWrapper;
  20 import javax.xml.bind.annotation.XmlElements;
  21 import javax.xml.bind.annotation.XmlRootElement;
  22 import javax.xml.bind.annotation.XmlType;
  23
  24 import org.springframework.security.GrantedAuthority;
  25
  26 import eu.etaxonomy.cdm.model.agent.AgentBase;
  27 import eu.etaxonomy.cdm.model.agent.Institution;
  28 import eu.etaxonomy.cdm.model.agent.InstitutionType;
  29 import eu.etaxonomy.cdm.model.agent.Person;
  30 import eu.etaxonomy.cdm.model.agent.Team;
  31 import eu.etaxonomy.cdm.model.common.AnnotationType;
  32 import eu.etaxonomy.cdm.model.common.DefinedTermBase;
  33 import eu.etaxonomy.cdm.model.common.EventBase;
  34 import eu.etaxonomy.cdm.model.common.ExtensionType;
  35 import eu.etaxonomy.cdm.model.common.Figure;
  36 import eu.etaxonomy.cdm.model.common.GrantedAuthorityImpl;
  37 import eu.etaxonomy.cdm.model.common.Group;
  38 import eu.etaxonomy.cdm.model.common.Language;
  39 import eu.etaxonomy.cdm.model.common.LanguageString;
  40 import eu.etaxonomy.cdm.model.common.MarkerType;
  41 import eu.etaxonomy.cdm.model.common.OrderedTermVocabulary;
  42 import eu.etaxonomy.cdm.model.common.TermVocabulary;
  43 import eu.etaxonomy.cdm.model.common.User;
  44 import eu.etaxonomy.cdm.model.description.AbsenceTerm;
  45 import eu.etaxonomy.cdm.model.description.Feature;
  46 import eu.etaxonomy.cdm.model.description.FeatureTree;
  47 import eu.etaxonomy.cdm.model.description.MeasurementUnit;
  48 import eu.etaxonomy.cdm.model.description.MediaKey;
  49 import eu.etaxonomy.cdm.model.description.Modifier;
  50 import eu.etaxonomy.cdm.model.description.PresenceTerm;
  51 import eu.etaxonomy.cdm.model.description.Scope;
  52 import eu.etaxonomy.cdm.model.description.Sex;
  53 import eu.etaxonomy.cdm.model.description.Stage;
  54 import eu.etaxonomy.cdm.model.description.State;
  55 import eu.etaxonomy.cdm.model.description.StatisticalMeasure;
  56 import eu.etaxonomy.cdm.model.description.TextFormat;
  57 import eu.etaxonomy.cdm.model.location.Continent;
  58 import eu.etaxonomy.cdm.model.location.NamedAreaLevel;
  59 import eu.etaxonomy.cdm.model.location.NamedAreaType;
  60 import eu.etaxonomy.cdm.model.location.ReferenceSystem;
  61 import eu.etaxonomy.cdm.model.location.TdwgArea;
  62 import eu.etaxonomy.cdm.model.location.WaterbodyOrCountry;
  63 import eu.etaxonomy.cdm.model.media.Media;
  64 import eu.etaxonomy.cdm.model.media.RightsTerm;
  65 import eu.etaxonomy.cdm.model.molecular.DnaSample;
  66 import eu.etaxonomy.cdm.model.molecular.PhylogeneticTree;
  67 import eu.etaxonomy.cdm.model.name.BacterialName;
  68 import eu.etaxonomy.cdm.model.name.BotanicalName;
  69 import eu.etaxonomy.cdm.model.name.CultivarPlantName;
  70 import eu.etaxonomy.cdm.model.name.HomotypicalGroup;
  71 import eu.etaxonomy.cdm.model.name.HybridRelationshipType;
  72 import eu.etaxonomy.cdm.model.name.NameRelationshipType;
  73 import eu.etaxonomy.cdm.model.name.NameTypeDesignation;
  74 import eu.etaxonomy.cdm.model.name.NameTypeDesignationStatus;
  75 import eu.etaxonomy.cdm.model.name.NomenclaturalCode;
  76 import eu.etaxonomy.cdm.model.name.NomenclaturalStatusType;
  77 import eu.etaxonomy.cdm.model.name.NonViralName;
  78 import eu.etaxonomy.cdm.model.name.Rank;
  79 import eu.etaxonomy.cdm.model.name.SpecimenTypeDesignation;
  80 import eu.etaxonomy.cdm.model.name.SpecimenTypeDesignationStatus;
  81 import eu.etaxonomy.cdm.model.name.TaxonNameBase;
  82 import eu.etaxonomy.cdm.model.name.TypeDesignationBase;
  83 import eu.etaxonomy.cdm.model.name.ViralName;
  84 import eu.etaxonomy.cdm.model.name.ZoologicalName;
  85 import eu.etaxonomy.cdm.model.occurrence.DerivationEvent;
  86 import eu.etaxonomy.cdm.model.occurrence.DerivationEventType;
  87 import eu.etaxonomy.cdm.model.occurrence.DerivedUnit;
  88 import eu.etaxonomy.cdm.model.occurrence.DeterminationModifier;
  89 import eu.etaxonomy.cdm.model.occurrence.FieldObservation;
  90 import eu.etaxonomy.cdm.model.occurrence.Fossil;
  91 import eu.etaxonomy.cdm.model.occurrence.GatheringEvent;
  92 import eu.etaxonomy.cdm.model.occurrence.LivingBeing;
  93 import eu.etaxonomy.cdm.model.occurrence.Observation;
  94 import eu.etaxonomy.cdm.model.occurrence.PreservationMethod;
  95 import eu.etaxonomy.cdm.model.occurrence.Specimen;
  96 import eu.etaxonomy.cdm.model.occurrence.SpecimenOrObservationBase;
  97 //import eu.etaxonomy.cdm.model.reference.Article;
  98 //import eu.etaxonomy.cdm.model.reference.Book;
  99 //import eu.etaxonomy.cdm.model.reference.BookSection;
 100 //import eu.etaxonomy.cdm.model.reference.CdDvd;
 101 //import eu.etaxonomy.cdm.model.reference.Database;
 102 //import eu.etaxonomy.cdm.model.reference.Generic;
 103 //import eu.etaxonomy.cdm.model.reference.InProceedings;
 104 //import eu.etaxonomy.cdm.model.reference.Journal;
 105 //import eu.etaxonomy.cdm.model.reference.Map;
 106 //import eu.etaxonomy.cdm.model.reference.Patent;
 107 //import eu.etaxonomy.cdm.model.reference.PersonalCommunication;
 108 //import eu.etaxonomy.cdm.model.reference.PrintSeries;
 109 //import eu.etaxonomy.cdm.model.reference.Proceedings;
 110 import eu.etaxonomy.cdm.model.reference.ReferenceBase;
 111 //import eu.etaxonomy.cdm.model.reference.Report;
 112 //import eu.etaxonomy.cdm.model.reference.Thesis;
 113 //import eu.etaxonomy.cdm.model.reference.WebPage;
 114 import eu.etaxonomy.cdm.model.taxon.Synonym;
 115 import eu.etaxonomy.cdm.model.taxon.SynonymRelationshipType;
 116 import eu.etaxonomy.cdm.model.taxon.Taxon;
 117 import eu.etaxonomy.cdm.model.taxon.TaxonBase;
 118 import eu.etaxonomy.cdm.model.taxon.TaxonRelationshipType;
 119 import eu.etaxonomy.cdm.model.taxon.TaxonomicTree;
 120
 121 /**
 122  * @author a.babadshanjan
 123  */
 124 @XmlAccessorType(XmlAccessType.FIELD)
 125 @XmlType(name = "DataSet", propOrder = {
 126             "terms",
 127             "termVocabularies",
 128                 "agents",
 129                 "collections",
 130                 "occurrences",
 131                 "eventBases",
 132             "references",
 133             "typeDesignations",
 134             "featureTrees",
 135             "taxonomicTrees",
 136             "taxonomicNames",
 137             "homotypicalGroups",
 138             "taxonBases",
 139             "media",
 140             "users",
 141             "groups",
 142             "grantedAuthorities",
 143             "languageStrings"
 144 })
 145 @XmlRootElement(name = "DataSet")
 146 public class DataSet {
 147
 148         @XmlElementWrapper(name = "Terms")
 149     @XmlElements({
 150         @XmlElement(name = "AbsenceTerm", namespace = "http://etaxonomy.eu/cdm/model/description/1.0", type = AbsenceTerm.class),
 151         @XmlElement(name = "AnnotationType", namespace = "http://etaxonomy.eu/cdm/model/common/1.0", type = AnnotationType.class),
 152         @XmlElement(name = "Continent", namespace = "http://etaxonomy.eu/cdm/model/location/1.0", type = Continent.class),
 153         @XmlElement(name = "DerivationEventType", namespace = "http://etaxonomy.eu/cdm/model/occurrence/1.0", type = DerivationEventType.class),
 154         @XmlElement(name = "DeterminationModifier", namespace = "http://etaxonomy.eu/cdm/model/occurrence/1.0", type = DeterminationModifier.class),
 155         @XmlElement(name = "ExtensionType", namespace = "http://etaxonomy.eu/cdm/model/common/1.0", type = ExtensionType.class),
 156         @XmlElement(name = "Feature", namespace = "http://etaxonomy.eu/cdm/model/description/1.0", type = Feature.class),
 157         @XmlElement(name = "HybridRelationshipType", namespace = "http://etaxonomy.eu/cdm/model/name/1.0", type = HybridRelationshipType.class),
 158         @XmlElement(name = "InstitutionType", namespace = "http://etaxonomy.eu/cdm/model/agent/1.0", type = InstitutionType.class),
 159 //        @XmlElement(name = "Keyword", namespace = "http://etaxonomy.eu/cdm/model/common/1.0", type = Keyword.class),
 160         @XmlElement(name = "Language", namespace = "http://etaxonomy.eu/cdm/model/common/1.0", type = Language.class),
 161         @XmlElement(name = "MarkerType", namespace = "http://etaxonomy.eu/cdm/model/common/1.0", type = MarkerType.class),
 162         @XmlElement(name = "MeasurementUnit", namespace = "http://etaxonomy.eu/cdm/model/description/1.0", type = MeasurementUnit.class),
 163         @XmlElement(name = "Modifier", namespace = "http://etaxonomy.eu/cdm/model/description/1.0", type = Modifier.class),
 164         @XmlElement(name = "NamedArea", namespace = "http://etaxonomy.eu/cdm/model/location/1.0", type = TdwgArea.class),
 165         @XmlElement(name = "NamedAreaLevel", namespace = "http://etaxonomy.eu/cdm/model/location/1.0", type = NamedAreaLevel.class),
 166         @XmlElement(name = "NamedAreaType", namespace = "http://etaxonomy.eu/cdm/model/location/1.0", type = NamedAreaType.class),
 167         @XmlElement(name = "NameRelationshipType", namespace = "http://etaxonomy.eu/cdm/model/name/1.0", type = NameRelationshipType.class),
 168         @XmlElement(name = "NameTypeDesignationStatus", namespace = "http://etaxonomy.eu/cdm/model/name/1.0", type = NameTypeDesignationStatus.class),
 169         @XmlElement(name = "NomenclaturalCode", namespace = "http://etaxonomy.eu/cdm/model/name/1.0", type = NomenclaturalCode.class),
 170         @XmlElement(name = "NomenclaturalStatusType", namespace = "http://etaxonomy.eu/cdm/model/name/1.0", type = NomenclaturalStatusType.class),
 171         @XmlElement(name = "PresenceTerm", namespace = "http://etaxonomy.eu/cdm/model/description/1.0", type = PresenceTerm.class),
 172         @XmlElement(name = "PreservationMethod", namespace = "http://etaxonomy.eu/cdm/model/occurrence/1.0", type = PreservationMethod.class),
 173         @XmlElement(name = "Rank", namespace = "http://etaxonomy.eu/cdm/model/name/1.0", type = Rank.class),
 174         @XmlElement(name = "ReferenceSystem", namespace = "http://etaxonomy.eu/cdm/model/location/1.0", type = ReferenceSystem.class),
 175         @XmlElement(name = "RightsTerm", namespace = "http://etaxonomy.eu/cdm/model/media/1.0", type = RightsTerm.class),
 176         @XmlElement(name = "Scope", namespace = "http://etaxonomy.eu/cdm/model/description/1.0", type = Scope.class),
 177         @XmlElement(name = "Sex", namespace = "http://etaxonomy.eu/cdm/model/description/1.0", type = Sex.class),
 178         @XmlElement(name = "SpecimenTypeDesignationStatus", namespace = "http://etaxonomy.eu/cdm/model/name/1.0", type = SpecimenTypeDesignationStatus.class),
 179         @XmlElement(name = "Stage", namespace = "http://etaxonomy.eu/cdm/model/description/1.0", type = Stage.class),
 180         @XmlElement(name = "State", namespace = "http://etaxonomy.eu/cdm/model/description/1.0", type = State.class),
 181         @XmlElement(name = "StatisticalMeasure", namespace = "http://etaxonomy.eu/cdm/model/description/1.0", type = StatisticalMeasure.class),
 182         @XmlElement(name = "SynonymRelationshipType", namespace = "http://etaxonomy.eu/cdm/model/taxon/1.0", type = SynonymRelationshipType.class),
 183         @XmlElement(name = "TaxonRelationshipType", namespace = "http://etaxonomy.eu/cdm/model/taxon/1.0", type = TaxonRelationshipType.class),
 184         //      @XmlElement(name = "TdwgArea", namespace = "http://etaxonomy.eu/cdm/model/location/1.0", type = TdwgArea.class),
 185         @XmlElement(name = "TextFormat", namespace = "http://etaxonomy.eu/cdm/model/description/1.0", type = TextFormat.class),
 186         @XmlElement(name = "WaterbodyOrCountry", namespace = "http://etaxonomy.eu/cdm/model/location/1.0", type = WaterbodyOrCountry.class)
 187
 188     })
 189     protected List<DefinedTermBase> terms = new ArrayList<DefinedTermBase>();
 190
 191         @XmlElementWrapper(name = "TermVocabularies")
 192     @XmlElements({
 193         @XmlElement(name = "TermVocabulary", namespace = "http://etaxonomy.eu/cdm/model/common/1.0", type = TermVocabulary.class),
 194         @XmlElement(name = "OrderedTermVocabulary", namespace = "http://etaxonomy.eu/cdm/model/common/1.0", type = OrderedTermVocabulary.class)
 195     })
 196
 197     protected List<TermVocabulary<DefinedTermBase>> termVocabularies = new ArrayList<TermVocabulary<DefinedTermBase>>();
 198
 199
 200     @XmlElementWrapper(name = "Agents")
 201     @XmlElements({
 202         @XmlElement(name = "Team", namespace = "http://etaxonomy.eu/cdm/model/agent/1.0", type = Team.class),
 203         @XmlElement(name = "Institution", namespace = "http://etaxonomy.eu/cdm/model/agent/1.0", type = Institution.class),
 204         @XmlElement(name = "Person", namespace = "http://etaxonomy.eu/cdm/model/agent/1.0", type = Person.class)
 205     })
 206     protected List<AgentBase> agents = new ArrayList<AgentBase>();
 207
 208
 209     @XmlElementWrapper(name = "Collections")
 210     @XmlElement(name = "Collection", namespace = "http://etaxonomy.eu/cdm/model/occurrence/1.0")
 211     protected List<eu.etaxonomy.cdm.model.occurrence.Collection> collections = new ArrayList<eu.etaxonomy.cdm.model.occurrence.Collection>();
 212
 213     @XmlElementWrapper(name = "FeatureTrees")
 214     @XmlElement(name = "FeatureTree", namespace = "http://etaxonomy.eu/cdm/model/description/1.0")
 215     protected List<FeatureTree> featureTrees = new ArrayList<FeatureTree>();
 216
 217     @XmlElementWrapper(name = "TaxonomicTrees")
 218     @XmlElement(name = "TaxonomicTree", namespace = "http://etaxonomy.eu/cdm/model/taxon/1.0")
 219     protected List<TaxonomicTree> taxonomicTrees = new ArrayList<TaxonomicTree>();
 220
 221
 222     protected List<LanguageString> languageStrings =new ArrayList<LanguageString>();
 223
 224
 225     @XmlElementWrapper(name = "Occurrences")
 226     @XmlElements({
 227         @XmlElement(name = "DerivedUnit", namespace = "http://etaxonomy.eu/cdm/model/occurrence/1.0", type = DerivedUnit.class),
 228         @XmlElement(name = "DnaSample", namespace = "http://etaxonomy.eu/cdm/model/occurrence/1.0", type = DnaSample.class),
 229         @XmlElement(name = "FieldObservation", namespace = "http://etaxonomy.eu/cdm/model/occurrence/1.0", type = FieldObservation.class),
 230         @XmlElement(name = "Fossil", namespace = "http://etaxonomy.eu/cdm/model/occurrence/1.0", type = Fossil.class),
 231         @XmlElement(name = "LivingBeing", namespace = "http://etaxonomy.eu/cdm/model/occurrence/1.0", type = LivingBeing.class),
 232         @XmlElement(name = "Observation", namespace = "http://etaxonomy.eu/cdm/model/occurrence/1.0", type = Observation.class),
 233         @XmlElement(name = "Specimen", namespace = "http://etaxonomy.eu/cdm/model/occurrence/1.0", type = Specimen.class)
 234     })
 235     protected List<SpecimenOrObservationBase> occurrences = new ArrayList<SpecimenOrObservationBase>();
 236
 237     @XmlElementWrapper(name = "EventBases")
 238     @XmlElements({
 239         @XmlElement(name = "DerivationEvent", namespace = "http://etaxonomy.eu/cdm/model/occurrence/1.0", type = DerivationEvent.class),
 240         @XmlElement(name = "GatheringEvent", namespace = "http://etaxonomy.eu/cdm/model/occurrence/1.0", type = GatheringEvent.class)
 241     })
 242     protected List<EventBase> eventBases = new ArrayList<EventBase>();
 243
 244     @XmlElementWrapper(name = "References")
 245     @XmlElements({
 246         @XmlElement(name = "ReferenceBase", namespace = "http://etaxonomy.eu/cdm/model/reference/1.0", type = ReferenceBase.class)
 247 //      @XmlElement(name = "Article", namespace = "http://etaxonomy.eu/cdm/model/reference/1.0", type = Article.class),
 248 //      @XmlElement(name = "Book", namespace = "http://etaxonomy.eu/cdm/model/reference/1.0", type = Book.class),
 249 //      @XmlElement(name = "BookSection", namespace = "http://etaxonomy.eu/cdm/model/reference/1.0", type = BookSection.class),
 250 //      @XmlElement(name = "CdDvd", namespace = "http://etaxonomy.eu/cdm/model/reference/1.0", type = CdDvd.class),
 251 //      @XmlElement(name = "Database", namespace = "http://etaxonomy.eu/cdm/model/reference/1.0", type = Database.class),
 252 //      @XmlElement(name = "Generic", namespace = "http://etaxonomy.eu/cdm/model/reference/1.0", type = Generic.class),
 253 //      @XmlElement(name = "InProceedings", namespace = "http://etaxonomy.eu/cdm/model/reference/1.0", type = InProceedings.class),
 254 //      @XmlElement(name = "Journal", namespace = "http://etaxonomy.eu/cdm/model/reference/1.0", type = Journal.class),
 255 //      @XmlElement(name = "Map", namespace = "http://etaxonomy.eu/cdm/model/reference/1.0", type = Map.class),
 256 //      @XmlElement(name = "Patent", namespace = "http://etaxonomy.eu/cdm/model/reference/1.0", type = Patent.class),
 257 //      @XmlElement(name = "PersonalCommunication", namespace = "http://etaxonomy.eu/cdm/model/reference/1.0", type = PersonalCommunication.class),
 258 //      @XmlElement(name = "PrintSeries", namespace = "http://etaxonomy.eu/cdm/model/reference/1.0", type = PrintSeries.class),
 259 //      @XmlElement(name = "Proceedings", namespace = "http://etaxonomy.eu/cdm/model/reference/1.0", type = Proceedings.class),
 260 //      @XmlElement(name = "Report", namespace = "http://etaxonomy.eu/cdm/model/reference/1.0", type = Report.class),
 261 //      @XmlElement(name = "Thesis", namespace = "http://etaxonomy.eu/cdm/model/reference/1.0", type = Thesis.class),
 262 //      @XmlElement(name = "WebPage", namespace = "http://etaxonomy.eu/cdm/model/reference/1.0", type = WebPage.class)
 263     })
 264     protected List<ReferenceBase> references = new ArrayList<ReferenceBase>();
 265
 266     @XmlElementWrapper(name = "TypeDesignations")
 267     @XmlElements({
 268         @XmlElement(name = "NameTypeDesignation", namespace = "http://etaxonomy.eu/cdm/model/name/1.0", type = NameTypeDesignation.class),
 269         @XmlElement(name = "SpecimenTypeDesignation", namespace = "http://etaxonomy.eu/cdm/model/name/1.0", type = SpecimenTypeDesignation.class)
 270     })
 271     protected List<TypeDesignationBase> typeDesignations = new ArrayList<TypeDesignationBase>();
 272
 273     @XmlElementWrapper(name = "TaxonomicNames")
 274     @XmlElements({
 275         @XmlElement(name = "BacterialName", namespace = "http://etaxonomy.eu/cdm/model/name/1.0", type = BacterialName.class),
 276         @XmlElement(name = "BotanicalName", namespace = "http://etaxonomy.eu/cdm/model/name/1.0", type = BotanicalName.class),
 277         @XmlElement(name = "CultivarPlantName", namespace = "http://etaxonomy.eu/cdm/model/name/1.0", type = CultivarPlantName.class),
 278         @XmlElement(name = "NonViralName", namespace = "http://etaxonomy.eu/cdm/model/name/1.0", type = NonViralName.class),
 279         @XmlElement(name = "ViralName", namespace = "http://etaxonomy.eu/cdm/model/name/1.0", type = ViralName.class),
 280         @XmlElement(name = "ZoologicalName", namespace = "http://etaxonomy.eu/cdm/model/name/1.0", type = ZoologicalName.class)
 281     })
 282     protected List<TaxonNameBase> taxonomicNames = new ArrayList<TaxonNameBase>();
 283
 284     @XmlElementWrapper(name = "TaxonBases")
 285     @XmlElements({
 286       @XmlElement(name = "Taxon", namespace = "http://etaxonomy.eu/cdm/model/taxon/1.0", type = Taxon.class),
 287       @XmlElement(name = "Synonym", namespace = "http://etaxonomy.eu/cdm/model/taxon/1.0", type = Synonym.class)
 288     })
 289     protected List<TaxonBase> taxonBases = new ArrayList<TaxonBase>();
 290
 291     @XmlElementWrapper(name = "Media")
 292     @XmlElements({
 293       @XmlElement(name = "Media", namespace = "http://etaxonomy.eu/cdm/model/media/1.0", type = Media.class),
 294       @XmlElement(name = "MediaKey", namespace = "http://etaxonomy.eu/cdm/model/description/1.0", type = MediaKey.class),
 295       @XmlElement(name = "Figure", namespace = "http://etaxonomy.eu/cdm/model/common/1.0", type = Figure.class),
 296       @XmlElement(name = "PhylogeneticTree", namespace = "http://etaxonomy.eu/cdm/model/molecular/1.0", type = PhylogeneticTree.class)
 297     })
 298     protected List<Media> media = new ArrayList<Media>();
 299
 300     @XmlElementWrapper(name = "HomotypicalGroups")
 301     @XmlElement(name = "HomotypicalGroup", namespace = "http://etaxonomy.eu/cdm/model/name/1.0")
 302     protected List<HomotypicalGroup> homotypicalGroups = new ArrayList<HomotypicalGroup>();
 303
 304     @XmlElementWrapper(name = "Users")
 305     @XmlElement(name = "User", namespace = "http://etaxonomy.eu/cdm/model/common/1.0")
 306     protected List<User> users = new ArrayList<User>();
 307
 308     @XmlElementWrapper(name = "Groups")
 309     @XmlElement(name = "Group", namespace = "http://etaxonomy.eu/cdm/model/common/1.0")
 310     protected List<Group> groups = new ArrayList<Group>();
 311
 312     @XmlElementWrapper(name = "GrantedAuthorities")
 313     @XmlElement(name = "GrantedAuthority", namespace = "http://etaxonomy.eu/cdm/model/common/1.0", type = GrantedAuthorityImpl.class)
 314     protected List<GrantedAuthority> grantedAuthorities = new ArrayList<GrantedAuthority>();
 315
 316     /**
 317      * Gets the value of the agents property.
 318      *
 319      * @return
 320      *     possible object is
 321      *     {@link List<Agent> }
 322      *
 323      */
 324     public List<AgentBase> getAgents() {
 325         return agents;
 326     }
 327
 328     /**
 329      * Sets the value of the agents property.
 330      *
 331      * @param value
 332      *     allowed object is
 333      *     {@link List<Agent> }
 334      *
 335      */
 336     public void setAgents(List<AgentBase> value) {
 337         this.agents = value;
 338     }
 339
 340     /**
 341      * Gets the value of the collections property.
 342      *
 343      * @return
 344      *     possible object is
 345      *     {@link List<eu.etaxonomy.cdm.model.occurrence.Collection> }
 346      *
 347      */
 348     public List<eu.etaxonomy.cdm.model.occurrence.Collection> getCollections() {
 349         return collections;
 350     }
 351
 352     /**
 353      * Sets the value of the collections property.
 354      *
 355      * @param value
 356      *     allowed object is
 357      *     {@link List<eu.etaxonomy.cdm.model.occurrence.Collection> }
 358      *
 359      */
 360     public void setCollections(List<eu.etaxonomy.cdm.model.occurrence.Collection> value) {
 361         this.collections = value;
 362     }
 363
 364     /**
 365      * Gets the value of the terms property.
 366      *
 367      * @return
 368      *     possible object is
 369      *     {@link List<TermBase> }
 370      *
 371      */
 372     public List<DefinedTermBase> getTerms() {
 373         return terms;
 374     }
 375
 376     /**
 377      * Sets the value of the terms property.
 378      *
 379      * @param value
 380      *     allowed object is
 381      *     {@link List<TermBase> }
 382      *
 383      */
 384     public void setTerms(List<DefinedTermBase> value) {
 385         this.terms = value;
 386     }
 387
 388     /**
 389      * Gets the value of the term vocabularies property.
 390      *
 391      * @return
 392      *     possible object is
 393      *     {@link List<TermVocabulary> }
 394      *
 395      */
 396
 397     public List<TermVocabulary<DefinedTermBase>> getTermVocabularies() {
 398         return termVocabularies;
 399     }
 400
 401     /**
 402      * Sets the value of the term vocabularies property.
 403      *
 404      * @param value
 405      *     allowed object is
 406      *     {@link List<TermVocabulary> }
 407      *
 408      */
 409     public void setTermVocabularies(List<TermVocabulary<DefinedTermBase>> value) {
 410         this.termVocabularies = value;
 411     }
 412
 413
 414
 415     /**
 416      * Gets the value of the taxonomicNames property.
 417      *
 418      * @return
 419      *     possible object is
 420      *     {@link List<axonNameBase> }
 421      *
 422      */
 423     public List<TaxonNameBase> getTaxonomicNames() {
 424         return taxonomicNames;
 425     }
 426
 427     /**
 428      * Sets the value of the taxonomicNames property.
 429      *
 430      * @param value
 431      *     allowed object is
 432      *     {@link List<TaxonNameBase> }
 433      *
 434      */
 435     public void setTaxonomicNames(List<TaxonNameBase> value) {
 436         this.taxonomicNames = value;
 437     }
 438
 439     /**
 440      * Gets the value of the eventBases property.
 441      *
 442      * @return
 443      *     possible object is
 444      *     {@link List<EventBase> }
 445      *
 446      */
 447     public List<EventBase> getEventBases() {
 448         return eventBases;
 449     }
 450
 451     /**
 452      * Sets the value of the eventBases property.
 453      *
 454      * @param value
 455      *     allowed object is
 456      *     {@link List<EventBase> }
 457      *
 458      */
 459     public void setEventBases(List<EventBase> value) {
 460         this.eventBases = value;
 461     }
 462
 463     /**
 464      * Gets the value of the occurrences property.
 465      *
 466      * @return
 467      *     possible object is
 468      *     {@link List<SpecimenOrObservationBase> }
 469      *
 470      */
 471     public List<SpecimenOrObservationBase> getOccurrences() {
 472         return occurrences;
 473     }
 474
 475     /**
 476      * Sets the value of the occurrences property.
 477      *
 478      * @param value
 479      *     allowed object is
 480      *     {@link List<SpecimenOrObservationBase> }
 481      *
 482      */
 483     public void setOccurrences(List<SpecimenOrObservationBase> value) {
 484         this.occurrences = value;
 485     }
 486     /*
 487     * Gets the value of the occurrences property.
 488     *
 489     * @return
 490     *     possible object is
 491     *     {@link List<LanguageStringBase> }
 492     *
 493     */
 494    public List<LanguageString> getLanguageStrings() {
 495        return languageStrings;
 496    }
 497
 498    /**
 499     * Sets the value of the occurrences property.
 500     *
 501     * @param value
 502     *     allowed object is
 503     *     {@link List<SpecimenOrObservationBase> }
 504     *
 505     */
 506    public void setLanguageStrings(List<LanguageString> value) {
 507        this.languageStrings = value;
 508    }
 509     /**
 510      * Gets the value of the references property.
 511      *
 512      * @return
 513      *     possible object is
 514      *     {@link List<ReferenceBase> }
 515      *
 516      */
 517     public List<ReferenceBase> getReferences() {
 518         return references;
 519     }
 520
 521     /**
 522      * Sets the value of the references property.
 523      *
 524      * @param value
 525      *     allowed object is
 526      *     {@link List<ReferenceBase> }
 527      *
 528      */
 529     public void setReferences(List<ReferenceBase> value) {
 530         this.references = value;
 531     }
 532
 533     /**
 534      * Gets the value of the featureTrees property.
 535      *
 536      * @return
 537      *     possible object is
 538      *     {@link List<FeatureTree> }
 539      *
 540      */
 541     public List<FeatureTree> getFeatureTrees() {
 542         return featureTrees;
 543     }
 544
 545     /**
 546      * Sets the value of the featureTrees property.
 547      *
 548      * @param value
 549      *     allowed object is
 550      *     {@link List<FeatureTree> }
 551      *
 552      */
 553     public void setTaxonomicTrees(List<TaxonomicTree> value) {
 554         this.taxonomicTrees = value;
 555     }
 556     /**
 557      * Gets the value of the featureTrees property.
 558      *
 559      * @return
 560      *     possible object is
 561      *     {@link List<FeatureTree> }
 562      *
 563      */
 564     public List<TaxonomicTree> getTaxonomicTrees() {
 565         return taxonomicTrees;
 566     }
 567
 568     /**
 569      * Sets the value of the featureTrees property.
 570      *
 571      * @param value
 572      *     allowed object is
 573      *     {@link List<FeatureTree> }
 574      *
 575      */
 576     public void setFeatureTrees(List<FeatureTree> value) {
 577         this.featureTrees = value;
 578     }
 579
 580     /**
 581      * Adds the taxonBases in value to the taxonBases property list.
 582      *
 583      * @param value
 584      *     allowed object is
 585      *     {@link Collection<TaxonBase> }
 586      *
 587      */
 588     public void addTaxonBases(Collection<TaxonBase> value) {
 589         this.taxonBases.addAll(value);
 590     }
 591
 592     /**
 593      * Gets the value of the taxonBases property as {@link Collection<TaxonBase> }
 594      *
 595      * @return
 596      *     possible object is
 597      *     {@link List<TaxonBase> }
 598      *
 599      */
 600     public List<TaxonBase> getTaxonBases() {
 601         return taxonBases;
 602     }
 603
 604     /**
 605      * Sets the value of the taxonBases property.
 606      *
 607      * @param value
 608      *     allowed object is
 609      *     {@link List<TaxonBase> }
 610      *
 611      */
 612     public void setTaxonBases(List<TaxonBase> value) {
 613         this.taxonBases = value;
 614     }
 615
 616     /**
 617      * Adds the taxonBase in value to the taxonBases property list.
 618      *
 619      * @param value
 620      *
 621      */
 622     public void addTaxonBase(TaxonBase value) {
 623                 this.taxonBases.add(value);
 624     }
 625
 626     /**
 627      * Adds the media in value to the media property list.
 628      *
 629      * @param value
 630      *     allowed object is
 631      *     {@link Collection<VersionableEntity> }
 632      *
 633      */
 634     public <T extends Media> void addMedia(Collection<T> value) {
 635         for (T medium: value) {
 636                 this.media.add(medium);
 637         }
 638     }
 639
 640     /**
 641      * Gets the value of the  property.
 642      *
 643      * @return
 644      *     possible object is
 645      *     {@link List<ReferencedEntityBase> }
 646      *
 647      */
 648     public List<Media> getMedia() {
 649         return media;
 650     }
 651
 652     /**
 653      * Sets the value of the referencedEntities property.
 654      *
 655      * @param value
 656      *     allowed object is
 657      *     {@link List<ReferencedEntityBase> }
 658      *
 659      */
 660     public void setMedia(List<Media> value) {
 661         this.media = new ArrayList<Media>();
 662         media.addAll(value);
 663     }
 664
 665     /**
 666      * Gets the value of the synonyms property.
 667      *
 668      * @return
 669      *     possible object is
 670      *     {@link List<Synonym> }
 671      *
 672      */
 673     public List<HomotypicalGroup> getHomotypicalGroups() {
 674         return homotypicalGroups;
 675     }
 676
 677     /**
 678      * Sets the value of the synonyms property.
 679      *
 680      * @param value
 681      *     allowed object is
 682      *     {@link List<Synonym> }
 683      *
 684      */
 685     public void setHomotypicalGroups(List<HomotypicalGroup> value) {
 686         this.homotypicalGroups = value;
 687     }
 688
 689     /**
 690      * Gets the value of the typeDesignations property.
 691      *
 692      * @return
 693      *     possible object is
 694      *     {@link List<TypeDesignationBase> }
 695      *
 696      */
 697     public List<TypeDesignationBase> getTypeDesignations() {
 698         return typeDesignations;
 699     }
 700
 701     /**
 702      * Sets the value of the typeDesignations property.
 703      *
 704      * @param value
 705      *     allowed object is
 706      *     {@link List<TypeDesignationBase> }
 707      *
 708      */
 709         public void addTypeDesignations(List<TypeDesignationBase> typeDesignations) {
 710                 this.typeDesignations.addAll(typeDesignations);
 711         }
 712
 713         /**
 714      * Gets the value of the users property.
 715      *
 716      * @return
 717      *     possible object is
 718      *     {@link List<User> }
 719      *
 720      */
 721         public List<User> getUsers() {
 722                 return users;
 723         }
 724
 725         /**
 726      * Sets the value of the users property.
 727      *
 728      * @param value
 729      *     allowed object is
 730      *     {@link List<User> }
 731      *
 732      */
 733         public void setUsers(List<User> users) {
 734                 this.users = users;
 735         }
 736
 737         /**
 738      * Gets the value of the groups property.
 739      *
 740      * @return
 741      *     possible object is
 742      *     {@link List<Group> }
 743      *
 744      */
 745         public List<Group> getGroups() {
 746                 return groups;
 747         }
 748
 749         /**
 750      * Sets the value of the groups property.
 751      *
 752      * @param value
 753      *     allowed object is
 754      *     {@link List<Group> }
 755      *
 756      */
 757         public void setGroups(List<Group> groups) {
 758                 this.groups = groups;
 759         }
 760
 761         /**
 762      * Gets the value of the grantedAuthorities property.
 763      *
 764      * @return
 765      *     possible object is
 766      *     {@link List<GrantedAuthority> }
 767      *
 768      */
 769         public List<GrantedAuthority> getGrantedAuthorities() {
 770                 return grantedAuthorities;
 771         }
 772
 773         /**
 774      * Sets the value of the grantedAuthorities property.
 775      *
 776      * @param value
 777      *     allowed object is
 778      *     {@link List<GrantedAuthority> }
 779      *
 780      */
 781         public void setGrantedAuthorities(List<GrantedAuthority> grantedAuthorities) {
 782                 this.grantedAuthorities = grantedAuthorities;
 783         }
 784
 785         public void addUser(User deproxy) {
 786                 this.users.add(deproxy);
 787
 788         }
 789
 790 }