cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/specimen/abcd206/in/Abcd206ImportConfigurator.java

   1 /**
   2  * Copyright (C) 2007 EDIT
   3  * European Distributed Institute of Taxonomy
   4  * http://www.e-taxonomy.eu
   5  *
   6  * The contents of this file are subject to the Mozilla Public License Version 1.1
   7  * See LICENSE.TXT at the top of this package for the full license terms.
   8  */
   9
  10 package eu.etaxonomy.cdm.io.specimen.abcd206.in;
  11
  12
  13 import java.io.InputStream;
  14 import java.net.URI;
  15
  16 import org.apache.log4j.Logger;
  17
  18 import eu.etaxonomy.cdm.common.UriUtils;
  19 import eu.etaxonomy.cdm.database.ICdmDataSource;
  20 import eu.etaxonomy.cdm.io.common.IMatchingImportConfigurator;
  21 import eu.etaxonomy.cdm.io.common.mapping.IInputTransformer;
  22 import eu.etaxonomy.cdm.io.specimen.SpecimenImportConfiguratorBase;
  23 import eu.etaxonomy.cdm.model.reference.Reference;
  24
  25 /**
  26  * @author p.kelbert
  27  * @since 20.10.2008
  28  */
  29 public class Abcd206ImportConfigurator
  30         extends SpecimenImportConfiguratorBase<Abcd206ImportConfigurator, Abcd206ImportState, InputStream>
  31         implements IMatchingImportConfigurator {
  32
  33     private static final long serialVersionUID = -7204105522522645681L;
  34
  35     @SuppressWarnings("unused")
  36     private static final Logger logger = Logger.getLogger(Abcd206ImportConfigurator.class);
  37
  38
  39     //TODO
  40     private static IInputTransformer defaultTransformer = null;
  41
  42     private URI sourceUri;
  43
  44     private boolean getSiblings = false;
  45
  46
  47
  48     @Override
  49     @SuppressWarnings("unchecked")
  50     protected void makeIoClassList(){
  51         System.out.println("makeIOClassList");
  52         ioClassList = new Class[]{
  53                 Abcd206Import.class,
  54         };
  55     }
  56
  57     public static Abcd206ImportConfigurator NewInstance(URI uri,ICdmDataSource destination){
  58         return new Abcd206ImportConfigurator(null, uri, destination, false);
  59     }
  60
  61     /**
  62      * @param uri
  63      * @param object
  64      * @param b
  65      * @return
  66      */
  67     public static Abcd206ImportConfigurator NewInstance(URI uri, ICdmDataSource destination, boolean interact) {
  68         return new Abcd206ImportConfigurator(null, uri, destination, interact);
  69     }
  70
  71     /**
  72      * @param uri
  73      * @param object
  74      * @param b
  75      * @return
  76      *//*
  77     public static Abcd206ImportConfigurator NewInstance(InputStream stream, ICdmDataSource destination, boolean interact) {
  78         return new Abcd206ImportConfigurator(stream, null, destination, interact);
  79     }
  80 */
  81
  82
  83     /**
  84      * @param berlinModelSource
  85      * @param sourceReference
  86      * @param destination
  87      */
  88     private Abcd206ImportConfigurator(InputStream stream, URI uri, ICdmDataSource destination, boolean interact) {
  89         super(defaultTransformer);
  90         if (stream != null){
  91                 setSource(stream);
  92         }else{
  93                 this.sourceUri = uri;
  94         }
  95         setDestination(destination);
  96         setSourceReferenceTitle("ABCD classic");
  97         setInteractWithUser(interact);
  98     }
  99
 100
 101
 102
 103
 104     @Override
 105     public Abcd206ImportState getNewState() {
 106         return new Abcd206ImportState(this);
 107     }
 108
 109
 110     @Override
 111     public InputStream getSource(){
 112         if (super.getSource() != null){
 113                 return super.getSource();
 114         }else if (this.sourceUri != null){
 115                 try {
 116                                 InputStream is = UriUtils.getInputStream(sourceUri);
 117                                 setSource(is);
 118                                 return is;
 119                         } catch (Exception e) {
 120                                 throw new RuntimeException(e);
 121                         }
 122         }else{
 123                 return null;
 124         }
 125     }
 126
 127
 128
 129     public URI getSourceUri(){
 130         return this.sourceUri;
 131     }
 132
 133     public void setSourceUri(URI sourceUri) {
 134         this.sourceUri = sourceUri;
 135         super.setSource(null);
 136     }
 137
 138
 139
 140
 141     @Override
 142     public Reference getSourceReference() {
 143         //TODO
 144         return sourceReference;
 145     }
 146
 147     /**
 148      * @return the getSiblings
 149      */
 150     public boolean isGetSiblings() {
 151         return getSiblings;
 152     }
 153
 154     /**
 155      * @param getSiblings the getSiblings to set
 156      */
 157     public void setGetSiblings(boolean getSiblings) {
 158         this.getSiblings = getSiblings;
 159     }
 160
 161
 162
 163
 164 @Override
 165 public String toString(){
 166
 167     StringBuffer result = new StringBuffer();
 168     //the preference value is build like this:
 169       //<section1>:true;<section2>:false....
 170
 171       result.append("ignoreImportOfExistingSpecimen");
 172       result.append(":");
 173       result.append(this.isIgnoreImportOfExistingSpecimen());
 174       result.append(";");
 175       result.append("addIndividualsAssociationsSuchAsSpecimenAndObservations");
 176       result.append(":");
 177       result.append(this.isAddIndividualsAssociationsSuchAsSpecimenAndObservations());
 178       result.append(";");
 179       result.append("reuseExistingTaxaWhenPossible");
 180       result.append(":");
 181       result.append(this.isReuseExistingTaxaWhenPossible());
 182       result.append(";");
 183       result.append("ignoreAuthorship");
 184       result.append(":");
 185       result.append(this.isIgnoreAuthorship());
 186       result.append(";");
 187       result.append("addMediaAsMediaSpecimen");
 188       result.append(":");
 189       result.append(this.isAddMediaAsMediaSpecimen());
 190       result.append(";");
 191       result.append("reuseExistingMetaData");
 192       result.append(":");
 193       result.append(this.isReuseExistingMetaData());
 194       result.append(";");
 195       result.append("reuseExistingDescriptiveGroups");
 196       result.append(":");
 197       result.append(this.isReuseExistingDescriptiveGroups());
 198       result.append(";");
 199       result.append("allowReuseOtherClassifications");
 200       result.append(":");
 201       result.append(this.isAllowReuseOtherClassifications());
 202       result.append(";");
 203       result.append("deduplicateReferences");
 204       result.append(":");
 205       result.append(this.isDeduplicateReferences());
 206       result.append(";");
 207       result.append("deduplicateClassifications");
 208       result.append(":");
 209       result.append(this.isDeduplicateClassifications());
 210       result.append(";");
 211       result.append("moveNewTaxaToDefaultClassification");
 212       result.append(":");
 213       result.append(this.isMoveNewTaxaToDefaultClassification());
 214       result.append(";");
 215
 216       result.append("mapUnitIdToCatalogNumber");
 217       result.append(":");
 218       result.append(this.isMapUnitIdToCatalogNumber());
 219       result.append(";");
 220       result.append("mapUnitIdToAccessionNumber");
 221       result.append(":");
 222       result.append(this.isMapUnitIdToAccessionNumber());
 223       result.append(";");
 224       result.append("mapUnitIdToBarcode");
 225       result.append(":");
 226       result.append(this.isMapUnitIdToBarcode());
 227       result.append(";");
 228
 229       result.append("overwriteExistingSpecimens");
 230       result.append(":");
 231       result.append(this.isOverwriteExistingSpecimens());
 232       result.append(";");
 233       result.append("nomenclaturalCode");
 234       result.append(":");
 235       result.append(this.getNomenclaturalCode() != null ? this.getNomenclaturalCode().getKey():"");
 236       result.append(";");
 237
 238
 239     return result.toString();
 240
 241 }
 242
 243
 244
 245
 246
 247
 248
 249
 250
 251
 252
 253 }