cdmlib-persistence/src/test/java/eu/etaxonomy/cdm/persistence/dao/hibernate/statistics/StatisticsDaoHibernateImplTest.java

   1 package eu.etaxonomy.cdm.persistence.dao.hibernate.statistics;
   2
   3 import static org.junit.Assert.assertTrue;
   4
   5 import java.io.FileNotFoundException;
   6 import java.util.ArrayList;
   7 import java.util.Arrays;
   8 import java.util.Collections;
   9 import java.util.HashMap;
  10 import java.util.List;
  11 import java.util.Map;
  12 import java.util.Random;
  13 import java.util.Set;
  14 import java.util.UUID;
  15
  16 import org.apache.commons.lang.RandomStringUtils;
  17 import org.apache.log4j.Logger;
  18 import org.junit.After;
  19 import org.junit.Before;
  20 import org.junit.Test;
  21 import org.unitils.spring.annotation.SpringBeanByType;
  22
  23 import eu.etaxonomy.cdm.model.common.Language;
  24 import eu.etaxonomy.cdm.model.common.OriginalSourceType;
  25 import eu.etaxonomy.cdm.model.description.CommonTaxonName;
  26 import eu.etaxonomy.cdm.model.description.DescriptionElementBase;
  27 import eu.etaxonomy.cdm.model.description.DescriptionElementSource;
  28 import eu.etaxonomy.cdm.model.description.TaxonDescription;
  29 import eu.etaxonomy.cdm.model.description.TaxonNameDescription;
  30 import eu.etaxonomy.cdm.model.description.TextData;
  31 import eu.etaxonomy.cdm.model.name.BotanicalName;
  32 import eu.etaxonomy.cdm.model.name.Rank;
  33 import eu.etaxonomy.cdm.model.reference.Reference;
  34 import eu.etaxonomy.cdm.model.reference.ReferenceFactory;
  35 import eu.etaxonomy.cdm.model.taxon.Classification;
  36 import eu.etaxonomy.cdm.model.taxon.Synonym;
  37 import eu.etaxonomy.cdm.model.taxon.SynonymType;
  38 import eu.etaxonomy.cdm.model.taxon.Taxon;
  39 import eu.etaxonomy.cdm.model.taxon.TaxonNode;
  40 import eu.etaxonomy.cdm.model.view.context.AuditEventContextHolder;
  41 import eu.etaxonomy.cdm.persistence.dao.description.IDescriptionDao;
  42 import eu.etaxonomy.cdm.persistence.dao.description.IDescriptionElementDao;
  43 import eu.etaxonomy.cdm.persistence.dao.reference.IReferenceDao;
  44 import eu.etaxonomy.cdm.persistence.dao.statistics.IStatisticsDao;
  45 import eu.etaxonomy.cdm.persistence.dao.taxon.IClassificationDao;
  46 import eu.etaxonomy.cdm.persistence.dao.taxon.ITaxonDao;
  47 import eu.etaxonomy.cdm.persistence.dao.taxon.ITaxonNodeDao;
  48 import eu.etaxonomy.cdm.test.integration.CdmTransactionalIntegrationTest;
  49
  50 public class StatisticsDaoHibernateImplTest
  51         extends CdmTransactionalIntegrationTest {
  52
  53     @SuppressWarnings("unused")
  54     private static final Logger logger = Logger.getLogger(StatisticsDaoHibernateImplTest.class);
  55
  56         private static final boolean PRINTOUT = true;
  57
  58         @SpringBeanByType
  59         private IStatisticsDao statisticsDao;
  60
  61         private UUID nodeUuid;
  62
  63         private List<Classification> classifications;
  64
  65
  66
  67         // choose a number
  68         private static final int NO_OF_ACCEPTED_TAXA = 10;
  69
  70         // choose a number (less than NO_OF_ACCEPTED_TAXA)
  71         private static final int NO_OF_CLASSIFICATIONS = 3;
  72
  73         // must be less or equal to NO_OF_ACCEPTED_TAXA
  74         private static final int NO_OF_SYNONYMS = 7;
  75
  76         // taxa that occure in several classifications:
  77         // must NOT be more than NO_OF_ACCEPTED_TAXA
  78         private static final int NO_OF_SHARED_TAXA = 4;
  79
  80         // must be NO_OF_ACCEPTED_TAXA + NO_OF_SYNONYMS
  81         private static final int NO_OF_ALLTAXA = NO_OF_ACCEPTED_TAXA
  82                         + NO_OF_SYNONYMS;
  83
  84         // must be NO_OF_ACCEPTED_TAXA+NO_OF_SYNONYMS
  85         private static final int NO_OF_TAXON_NAMES = NO_OF_ACCEPTED_TAXA
  86                         + NO_OF_SYNONYMS;
  87
  88         // this represents an approx. no of the amount that will actually generated!
  89         private static final int NO_OF_DESCRIPTIVE_SOURCE_REFERENCES = 16;
  90
  91         // private static final int NO_OF_ALL_REFERENCES = NO_OF_ACCEPTED_TAXA + 0;
  92
  93         // must not be more than NO_OF_ACCEPTED_TAXA+NO_OF_SYNONYMS
  94         private static final int NO_OF_NOMENCLATURAL_REFERENCES = NO_OF_ACCEPTED_TAXA
  95                         + NO_OF_SYNONYMS - 4;
  96
  97         // --------------------variables for all ------------------
  98
  99         private Long no_of_all_references = new Long(0);
 100         private Long no_of_descriptive_source_references = new Long(0);
 101
 102         // ............................................
 103
 104         // log the type enum to an int constant:
 105         private Map<String, Long> typeMap_ALL;
 106
 107         // ------------------ variables for CLASSIFICATIONS -----------------------
 108
 109         // int[] anArray = new int[NO_OF_CLASSIFICATIONS];
 110         private static List<Long> no_of_all_taxa_c = new ArrayList<Long>(
 111                         Collections.nCopies(NO_OF_CLASSIFICATIONS, new Long(0)));
 112         private static List<Long> no_of_accepted_taxa_c = new ArrayList<Long>(
 113                         Collections.nCopies(NO_OF_CLASSIFICATIONS, new Long(0)));
 114         private static List<Long> no_of_synonyms_c = new ArrayList<Long>(
 115                         Collections.nCopies(NO_OF_CLASSIFICATIONS, new Long(0)));
 116         private static List<Long> no_of_taxon_names_c = new ArrayList<Long>(
 117                         Collections.nCopies(NO_OF_CLASSIFICATIONS, new Long(0)));
 118         private static List<Long> no_of_descriptive_source_references_c = new ArrayList<Long>(
 119                         Collections.nCopies(NO_OF_CLASSIFICATIONS, new Long(0)));
 120         private static List<Long> no_of_all_references_c = new ArrayList<Long>(
 121                         Collections.nCopies(NO_OF_CLASSIFICATIONS, new Long(0)));
 122         private static List<Long> no_of_nomenclatural_references_c = new ArrayList<Long>(
 123                         Collections.nCopies(NO_OF_CLASSIFICATIONS, new Long(0)));
 124         // we do not count classifications in classifications
 125
 126         // ........................... constant map ..........................
 127
 128         private static final Map<String, List<Long>> typeCountMap_CLASSIFICATION = new HashMap<String, List<Long>>() {
 129                 {
 130                         put("CLASSIFICATION",
 131                                         new ArrayList<Long>(Arrays.asList((Long) null, null, null)));
 132                         put("ALL_TAXA", no_of_all_taxa_c);
 133                         put("ACCEPTED_TAXA", no_of_accepted_taxa_c);
 134                         put("SYNONYMS", no_of_synonyms_c);
 135                         put("TAXON_NAMES", no_of_taxon_names_c);
 136                         put("DESCRIPTIVE_SOURCE_REFERENCES",
 137                                         no_of_descriptive_source_references_c);
 138                         put("ALL_REFERENCES", no_of_all_references_c);
 139                         put("NOMENCLATURAL_REFERENCES", no_of_nomenclatural_references_c);
 140                 }
 141         };
 142
 143         // ****************** services: ************************
 144         @SpringBeanByType
 145         private IStatisticsDao service;
 146         @SpringBeanByType
 147         private IClassificationDao classificationDao;
 148         @SpringBeanByType
 149         private ITaxonDao taxonDao;
 150         @SpringBeanByType
 151         private IReferenceDao referenceDao;
 152         @SpringBeanByType
 153         private IDescriptionDao descriptionDao;
 154         @SpringBeanByType
 155         private IDescriptionElementDao descriptionElementDao;
 156         @SpringBeanByType
 157         private ITaxonNodeDao taxonNodeDao;
 158
 159
 160         @Before
 161         public void setUp() {
 162                 // nodeUuid =UUID.fromString("46cd7e78-f7d5-4c31-937b-2bc5074618c4");
 163                 nodeUuid = UUID.fromString("0b5846e5-b8d2-4ca9-ac51-099286ea4adc");
 164
 165                 AuditEventContextHolder.clearContext();
 166
 167         }
 168
 169         @After
 170         public void tearDown() {
 171                 AuditEventContextHolder.clearContext();
 172         }
 173
 174         @Test
 175         // @DataSet
 176         public void testGetAllChildNodes() {
 177                 List<UUID> result;
 178                 createDataSet();
 179                 for (Classification classification : classifications) {
 180                         TaxonNode root;
 181                         root= createTaxTree(classification);
 182
 183                         result=statisticsDao.getAllChildNodeIds(root.getUuid());
 184                         System.out.println("classification "+ classification.getName()+": ");
 185                         System.out.println("result: "+result.toString());
 186                         System.out.println("");
 187                 }
 188                 if (PRINTOUT) {
 189                         print();
 190                 }
 191                 // result=statisticsDao.getAllTaxonIds(nodeUuid);
 192                 // statisticsDao.getAllTaxonIds();
 193                 assertTrue(true);
 194                 // fail("Not yet implemented");
 195         }
 196
 197         private void createDataSet() {
 198                 // create NO_OF_CLASSIFICATIONS classifications
 199                 classifications = new ArrayList<Classification>();
 200
 201                 for (int i = 1; i <= NO_OF_CLASSIFICATIONS; i++) {
 202                         Classification classification = Classification
 203                                         .NewInstance("European Abies" + i);
 204                         classifications.add(classification);
 205                         classificationDao.save(classification);
 206                 }
 207                 // create all taxa, references and synonyms and attach them to one or
 208                 // more classifications
 209
 210                 // variables: flags
 211                 int remainder = NO_OF_ACCEPTED_TAXA;
 212                 Reference sec = ReferenceFactory.newBook();
 213                 boolean secondClassificationForTaxonFlag = false;
 214                 boolean synonymFlag = false;
 215                 boolean tNomRefFlag = false;
 216                 boolean sNomRefFlag = false;
 217                 boolean tDescrSourceRefFlag = false;
 218                 boolean sDescrSourceRefFlag = false;
 219
 220                 // variables: counter (pre-loop)
 221                 int descriptiveElementsPerTaxon = (NO_OF_DESCRIPTIVE_SOURCE_REFERENCES / NO_OF_ACCEPTED_TAXA) + 1;
 222
 223                 int taxaInClass;
 224                 int classiCounter = 0, sharedClassification = 0, synonymCounter = 0, nomRefCounter = 0;
 225
 226                 // iterate over classifications and add taxa
 227                 for (/* see above */; remainder > 0
 228                                 && classiCounter < NO_OF_CLASSIFICATIONS; /* see below */) {
 229
 230                         // compute no of taxa to be created in this classification
 231                         if (classiCounter >= NO_OF_CLASSIFICATIONS - 1) { // last
 232                                                                                                                                 // classification
 233                                                                                                                                 // gets all left
 234                                                                                                                                 // taxa
 235                                 taxaInClass = remainder;
 236                         } else { // take half of left taxa for this class:
 237                                 taxaInClass = remainder / 2;
 238                         }
 239
 240                         // iterate over amount of taxa meant to be in this classification
 241                         for (int taxonCounter = 1; taxonCounter <= taxaInClass; taxonCounter++) {
 242
 243                                 // create a String for the Name
 244                                 RandomStringUtils.randomAlphabetic(10);
 245                                 String randomName = RandomStringUtils.randomAlphabetic(5) + " "
 246                                                 + RandomStringUtils.randomAlphabetic(10);
 247
 248                                 // create a name for the taxon
 249                                 BotanicalName name = BotanicalName.NewInstance(Rank.SPECIES());
 250                                 name.setNameCache(randomName, true);
 251
 252                                 // create nomenclatural reference for taxon name (if left)
 253                                 if (nomRefCounter < NO_OF_NOMENCLATURAL_REFERENCES) {
 254                                         // we remember this taxon has a nomenclatural reference:
 255                                         tNomRefFlag = true;
 256                                         Reference nomRef = ReferenceFactory.newBook();
 257                                         name.setNomenclaturalReference(nomRef);
 258                                         referenceDao.save(nomRef);
 259                                         nomRefCounter++;
 260                                 }
 261
 262                                 // create a new sec for every other taxon
 263                                 if (taxonCounter % 2 != 0) {
 264                                         sec = createSecReference(classiCounter, taxonCounter);
 265                                 }
 266
 267                                 // create the taxon
 268                                 Taxon taxon = Taxon.NewInstance(name, sec);
 269
 270                                 // create descriptions, description sources and their references
 271
 272                                 if (no_of_descriptive_source_references < NO_OF_DESCRIPTIVE_SOURCE_REFERENCES) {
 273
 274                                         tDescrSourceRefFlag = true;
 275
 276                                         // create a description and 2 description elements with
 277                                         // references for taxon name
 278                                         TaxonNameDescription nameDescr = TaxonNameDescription.NewInstance();
 279                                         CommonTaxonName nameElement = CommonTaxonName.NewInstance(
 280                                                         "Veilchen" + taxonCounter, Language.GERMAN());
 281                                         TextData textElement = new TextData();
 282                                         Reference nameElementRef = ReferenceFactory.newArticle();
 283                                         Reference textElementRef = ReferenceFactory
 284                                                         .newBookSection();
 285                                         nameElement.addSource(OriginalSourceType.PrimaryTaxonomicSource, null, null, nameElementRef, "name: ");
 286                                         textElement.addSource(OriginalSourceType.PrimaryTaxonomicSource, null, null, textElementRef, "text: ");
 287                                         nameDescr.addElement(nameElement);
 288                                         nameDescr.addElement(textElement);
 289                                         name.addDescription(nameDescr);
 290                                         // taxon.getName().addDescription(nameDescr);
 291                                         referenceDao.save(nameElementRef);
 292                                         referenceDao.save(textElementRef);
 293                                         descriptionDao.save(nameDescr);
 294
 295                                         // create descriptions, description sources and their
 296                                         // references
 297                                         // for taxon
 298                                         TaxonDescription taxonDescription = new TaxonDescription();
 299                                         for (int i = 0; i < descriptiveElementsPerTaxon; i++) {
 300                                                 DescriptionElementBase descriptionElement = new TextData();
 301                                                 DescriptionElementSource descriptionElementSource = DescriptionElementSource
 302                                                                 .NewInstance(OriginalSourceType.PrimaryTaxonomicSource);
 303                                                 Reference article = ReferenceFactory.newArticle();
 304
 305                                                 descriptionElementSource.setCitation(article);
 306                                                 descriptionElement.addSource(descriptionElementSource);
 307                                                 taxonDescription.addElement(descriptionElement);
 308                                                 referenceDao.save(article);
 309                                                 descriptionElementDao.save(descriptionElement);
 310
 311                                         }
 312                                         descriptionDao.save(taxonDescription);
 313                                         taxon.addDescription(taxonDescription);
 314
 315                                         // create a Specimen for taxon with description, descr.
 316                                         // element and referece
 317                                         //
 318                                         // Specimen specimen = Specimen.NewInstance();
 319                                         // SpecimenDescription specimenDescription =
 320                                         // SpecimenDescription.NewInstance(specimen);
 321                                         // DescriptionElementBase descrElement = new TextData();
 322                                         // Reference specimenRef = ReferenceFactory.newArticle();
 323                                         // descrElement.addSource(null, null, specimenRef, null);
 324                                         //
 325                                         //
 326                                         // descriptionService.save(specimenDescription);
 327                                         // taxon.add(specimen);
 328
 329                                         no_of_descriptive_source_references += descriptiveElementsPerTaxon + 2 + 1;
 330
 331                                 }
 332
 333                                 // add taxon to classification
 334                                 classifications.get(classiCounter).addChildTaxon(taxon, null, null);
 335
 336                                 // now if there are any left, we create a synonym for the taxon
 337                                 if (synonymCounter < NO_OF_SYNONYMS) {
 338                                         synonymFlag = true;
 339                                         randomName = RandomStringUtils.randomAlphabetic(5) + " "
 340                                                         + RandomStringUtils.randomAlphabetic(10);
 341                                         // name for synonym
 342                                         name = BotanicalName.NewInstance(Rank.SPECIES());
 343                                         name.setNameCache(randomName, true);
 344
 345                                         // create nomenclatural reference for synonym name (if left)
 346                                         if (nomRefCounter < NO_OF_NOMENCLATURAL_REFERENCES) {
 347                                                 sNomRefFlag = true;
 348                                                 Reference nomRef = ReferenceFactory.newBook();
 349                                                 name.setNomenclaturalReference(nomRef);
 350                                                 referenceDao.save(nomRef);
 351                                                 nomRefCounter++;
 352                                         }
 353
 354                                         if (no_of_descriptive_source_references < NO_OF_DESCRIPTIVE_SOURCE_REFERENCES) {
 355                                                 sDescrSourceRefFlag = true;
 356
 357                                                 // create a description and 2 description elements with
 358                                                 // references for synonym name
 359                                                 TaxonNameDescription nameDescr = TaxonNameDescription.NewInstance();
 360                                                 CommonTaxonName nameElement = CommonTaxonName
 361                                                                 .NewInstance("anderes Veilchen" + taxonCounter,
 362                                                                                 Language.GERMAN());
 363                                                 TextData textElement = new TextData();
 364                                                 Reference nameElementRef = ReferenceFactory.newArticle();
 365                                                 Reference textElementRef = ReferenceFactory.newBookSection();
 366                                                 nameElement.addSource(OriginalSourceType.PrimaryTaxonomicSource, null, null, nameElementRef,"name: ");
 367                                                 textElement.addSource(OriginalSourceType.PrimaryTaxonomicSource, null, null, textElementRef,"text: ");
 368                                                 nameDescr.addElement(nameElement);
 369                                                 nameDescr.addElement(textElement);
 370                                                 name.addDescription(nameDescr);
 371                                                 // taxon.getName().addDescription(nameDescr);
 372                                                 referenceDao.save(nameElementRef);
 373                                                 referenceDao.save(textElementRef);
 374                                                 descriptionDao.save(nameDescr);
 375                                                 no_of_descriptive_source_references += 2;
 376                                         }
 377
 378                                         // create a new reference for every other synonym:
 379                                         if (taxonCounter % 2 != 0) {
 380                                                 sec = createSecReference(classiCounter, taxonCounter);
 381                                         }
 382                                         Synonym synonym = Synonym.NewInstance(name, sec);
 383                                         taxonDao.save(synonym);
 384                                         taxon.addSynonym(synonym,
 385                                                         SynonymType.SYNONYM_OF());
 386
 387                                         synonymCounter++;
 388                                 }
 389
 390                                 // if this is not the last classification and there are
 391                                 // taxa left that should be in more than one classification
 392                                 // we add the taxon to the next class in the list too.
 393                                 if (classiCounter < NO_OF_CLASSIFICATIONS
 394                                                 && sharedClassification < NO_OF_SHARED_TAXA) {
 395                                         classifications.get(classiCounter + 1).addChildTaxon(taxon, null, null);
 396
 397                                         // we remember that this taxon is attached to 2
 398                                         // classifications:
 399                                         secondClassificationForTaxonFlag = true;
 400                                         sharedClassification++;
 401                                         classificationDao.saveOrUpdate(classifications
 402                                                         .get(classiCounter + 1));
 403                                 }
 404
 405                                 taxonDao.save(taxon);
 406                                 classificationDao.saveOrUpdate(classifications
 407                                                 .get(classiCounter));
 408
 409                                 // count the data created with this taxon:
 410                                 int c = classiCounter;
 411
 412                                 if (secondClassificationForTaxonFlag) {
 413                                         c++;
 414                                 }
 415
 416                                 // run the following loop once, if this taxon only belongs to
 417                                 // one
 418                                 // classification.
 419                                 // twice, if it is attached to 2 classifications
 420                                 for (int i = classiCounter; i <= c; i++) {
 421
 422                                         // count everything just created for this taxon:
 423                                         increment(no_of_accepted_taxa_c, i);
 424                                         increment(no_of_taxon_names_c, i);
 425                                         if (tNomRefFlag) {
 426                                                 increment(no_of_nomenclatural_references_c, i);
 427                                         }
 428                                         if (sNomRefFlag) {
 429                                                 increment(no_of_nomenclatural_references_c, i);
 430                                         }
 431                                         if (synonymFlag) {
 432                                                 increment(no_of_synonyms_c, i);
 433                                                 increment(no_of_taxon_names_c, i);
 434                                         }
 435                                         if (taxonCounter % 2 != 0) {
 436                                                 increment(no_of_all_references_c, i);
 437                                                 if (synonymFlag) {
 438                                                         increment(no_of_all_references_c, i);
 439                                                 }
 440                                         }
 441                                         if (tDescrSourceRefFlag) {
 442                                                 increment(no_of_descriptive_source_references_c, i,
 443                                                                 descriptiveElementsPerTaxon + 2);
 444                                         }
 445
 446                                         if (sDescrSourceRefFlag) {
 447                                                 increment(no_of_descriptive_source_references_c, i, 2);
 448                                         }
 449                                 }
 450                                 // put flags back:
 451                                 secondClassificationForTaxonFlag = false;
 452                                 tNomRefFlag = false;
 453                                 sNomRefFlag = false;
 454                                 synonymFlag = false;
 455                                 tDescrSourceRefFlag = false;
 456                                 sDescrSourceRefFlag = false;
 457                         }
 458
 459                         // modify variables (post-loop)
 460                         classiCounter++;
 461                         remainder -= taxaInClass;
 462
 463                 }
 464                 merge(no_of_accepted_taxa_c, no_of_synonyms_c, no_of_all_taxa_c);
 465                 merge(no_of_all_references_c, no_of_nomenclatural_references_c,
 466                                 no_of_all_references_c);
 467
 468                 // TODO Auto-generated method stub
 469
 470         }
 471
 472         /**
 473          * create and count a new sec Reference
 474          *
 475          * @param classiCounter
 476          * @param taxonCounter
 477          * @return
 478          */
 479         private Reference createSecReference(int classiCounter, int taxonCounter) {
 480                 Reference sec;
 481                 sec = ReferenceFactory.newBook();
 482                 sec.setTitle("book " + classiCounter + "." + taxonCounter);
 483                 referenceDao.save(sec);
 484                 no_of_all_references++;
 485                 return sec;
 486         }
 487
 488         /**
 489          * @param no_of_sth
 490          * @param inClassification
 491          * @param increase
 492          */
 493         private void increment(List<Long> no_of_sth, int inClassification,
 494                         int increase) {
 495                 no_of_sth.set(inClassification, (no_of_sth.get(inClassification))
 496                                 + increase);
 497         }
 498
 499         private void increment(List<Long> no_of_sth, int inClassification) {
 500                 increment(no_of_sth, inClassification, 1);
 501         }
 502
 503         private void merge(List<Long> no_of_sth1, List<Long> no_of_sth2,
 504                         List<Long> no_of_sum) {
 505
 506                 for (int i = 0; i < NO_OF_CLASSIFICATIONS; i++) {
 507                         Long sum = no_of_sth1.get(i) + no_of_sth2.get(i);
 508                         no_of_sum.set(i, sum);
 509
 510                 }
 511         }
 512
 513         private TaxonNode createTaxTree(Classification classification) {
 514                 Random rand = new Random();
 515
 516                         Set<TaxonNode> nodes = classification.getAllNodes();
 517                         ArrayList<TaxonNode> children = new ArrayList<>();
 518                         TaxonNode parent = nodes.iterator().next();
 519
 520                         TaxonNode root = parent;
 521                         nodes.remove(parent);
 522                         while (!nodes.isEmpty()) {
 523                                 int n = rand.nextInt(2) + 1;
 524                                 for (int i = 1; i <= n && !(nodes.isEmpty()); i++) {
 525                                         TaxonNode nextNode = nodes.iterator().next();
 526                                         nextNode = parent.addChildNode(nextNode, null, null);
 527                                         children.add(nextNode);
 528                                         nodes.remove(nextNode);
 529                                 }
 530
 531                                 parent = children.get(0);
 532                                 children.remove(0);
 533                         }
 534
 535                 return root;
 536         }
 537
 538         /**
 539          *
 540          */
 541         private void print() {
 542                 for (Classification classification : classifications) {
 543                         System.out.println("Classification:" + classification.toString());
 544                         for (TaxonNode node : classification.getAllNodes()) {
 545                                 System.out.println("\tTaxon: " + node.getTaxon().toString()+" node UUID: "+ node.getUuid());
 546                                 System.out.println(" \t(Name: "
 547                                                 + node.getTaxon().getName().toString() + ")");
 548                                 System.out.print("\tChildren: ");
 549                                 for (TaxonNode childNode : node.getChildNodes()) {
 550                                         System.out.print(/*childNode.getTaxon().getName() + */" node UUID: "+ node.getUuid()+"   ");
 551                                 }
 552                                 System.out.println();
 553
 554                                 if (node.getTaxon().getName().getNomenclaturalReference() != null) {
 555                                         System.out.println(" \t(Nomencl. Ref.: "
 556                                                         + node.getTaxon().getName()
 557                                                                         .getNomenclaturalReference().getId() + ")");
 558                                 }
 559                                 for (Synonym synonym : node.getTaxon().getSynonyms()) {
 560                                         System.out.println("\t\tSynonym: " + synonym.toString());
 561                                         System.out.println(" \t\t(Name: "
 562                                                         + synonym.getName().toString() + ")");
 563                                         if (synonym.getName().getNomenclaturalReference() != null) {
 564                                                 System.out.println(" \t\t(Nomencl. Ref.: "
 565                                                                 + synonym.getName().getNomenclaturalReference()
 566                                                                                 .getId() + ")");
 567                                         }
 568                                         System.out.println();
 569                                 }
 570                         }
 571
 572                 }
 573                 System.out.println();
 574                 System.out.println("end!");
 575
 576         }
 577
 578     /* (non-Javadoc)
 579      * @see eu.etaxonomy.cdm.test.integration.CdmIntegrationTest#createTestData()
 580      */
 581     @Override
 582     public void createTestDataSet() throws FileNotFoundException {
 583         // TODO Auto-generated method stub
 584
 585     }
 586 }