cdmlib-persistence/src/test/java/eu/etaxonomy/cdm/persistence/dao/hibernate/statistics/StatisticsDaoHibernateImplTest.java

   1 package eu.etaxonomy.cdm.persistence.dao.hibernate.statistics;
   2
   3 import static org.junit.Assert.assertTrue;
   4
   5 import java.io.FileNotFoundException;
   6 import java.util.ArrayList;
   7 import java.util.Arrays;
   8 import java.util.Collections;
   9 import java.util.HashMap;
  10 import java.util.List;
  11 import java.util.Map;
  12 import java.util.Random;
  13 import java.util.Set;
  14 import java.util.UUID;
  15
  16 import org.apache.commons.lang.RandomStringUtils;
  17 import org.apache.log4j.Logger;
  18 import org.junit.After;
  19 import org.junit.Before;
  20 import org.junit.Test;
  21 import org.unitils.spring.annotation.SpringBeanByType;
  22
  23 import eu.etaxonomy.cdm.model.common.Language;
  24 import eu.etaxonomy.cdm.model.description.CommonTaxonName;
  25 import eu.etaxonomy.cdm.model.description.DescriptionElementBase;
  26 import eu.etaxonomy.cdm.model.description.DescriptionElementSource;
  27 import eu.etaxonomy.cdm.model.description.TaxonDescription;
  28 import eu.etaxonomy.cdm.model.description.TaxonNameDescription;
  29 import eu.etaxonomy.cdm.model.description.TextData;
  30 import eu.etaxonomy.cdm.model.name.IBotanicalName;
  31 import eu.etaxonomy.cdm.model.name.Rank;
  32 import eu.etaxonomy.cdm.model.name.TaxonNameFactory;
  33 import eu.etaxonomy.cdm.model.reference.OriginalSourceType;
  34 import eu.etaxonomy.cdm.model.reference.Reference;
  35 import eu.etaxonomy.cdm.model.reference.ReferenceFactory;
  36 import eu.etaxonomy.cdm.model.taxon.Classification;
  37 import eu.etaxonomy.cdm.model.taxon.Synonym;
  38 import eu.etaxonomy.cdm.model.taxon.SynonymType;
  39 import eu.etaxonomy.cdm.model.taxon.Taxon;
  40 import eu.etaxonomy.cdm.model.taxon.TaxonNode;
  41 import eu.etaxonomy.cdm.model.view.context.AuditEventContextHolder;
  42 import eu.etaxonomy.cdm.persistence.dao.description.IDescriptionDao;
  43 import eu.etaxonomy.cdm.persistence.dao.description.IDescriptionElementDao;
  44 import eu.etaxonomy.cdm.persistence.dao.reference.IReferenceDao;
  45 import eu.etaxonomy.cdm.persistence.dao.statistics.IStatisticsDao;
  46 import eu.etaxonomy.cdm.persistence.dao.taxon.IClassificationDao;
  47 import eu.etaxonomy.cdm.persistence.dao.taxon.ITaxonDao;
  48 import eu.etaxonomy.cdm.persistence.dao.taxon.ITaxonNodeDao;
  49 import eu.etaxonomy.cdm.test.integration.CdmTransactionalIntegrationTest;
  50
  51 public class StatisticsDaoHibernateImplTest
  52         extends CdmTransactionalIntegrationTest {
  53
  54     private static final Logger logger = Logger.getLogger(StatisticsDaoHibernateImplTest.class);
  55
  56         @SpringBeanByType
  57         private IStatisticsDao statisticsDao;
  58
  59         private UUID nodeUuid;
  60
  61         private List<Classification> classifications;
  62
  63
  64
  65         // choose a number
  66         private static final int NO_OF_ACCEPTED_TAXA = 10;
  67
  68         // choose a number (less than NO_OF_ACCEPTED_TAXA)
  69         private static final int NO_OF_CLASSIFICATIONS = 3;
  70
  71         // must be less or equal to NO_OF_ACCEPTED_TAXA
  72         private static final int NO_OF_SYNONYMS = 7;
  73
  74         // taxa that occure in several classifications:
  75         // must NOT be more than NO_OF_ACCEPTED_TAXA
  76         private static final int NO_OF_SHARED_TAXA = 4;
  77
  78         // must be NO_OF_ACCEPTED_TAXA + NO_OF_SYNONYMS
  79         private static final int NO_OF_ALLTAXA = NO_OF_ACCEPTED_TAXA
  80                         + NO_OF_SYNONYMS;
  81
  82         // must be NO_OF_ACCEPTED_TAXA+NO_OF_SYNONYMS
  83         private static final int NO_OF_TAXON_NAMES = NO_OF_ACCEPTED_TAXA
  84                         + NO_OF_SYNONYMS;
  85
  86         // this represents an approx. no of the amount that will actually generated!
  87         private static final int NO_OF_DESCRIPTIVE_SOURCE_REFERENCES = 16;
  88
  89         // private static final int NO_OF_ALL_REFERENCES = NO_OF_ACCEPTED_TAXA + 0;
  90
  91         // must not be more than NO_OF_ACCEPTED_TAXA+NO_OF_SYNONYMS
  92         private static final int NO_OF_NOMENCLATURAL_REFERENCES = NO_OF_ACCEPTED_TAXA
  93                         + NO_OF_SYNONYMS - 4;
  94
  95         // --------------------variables for all ------------------
  96
  97         private Long no_of_all_references = new Long(0);
  98         private Long no_of_descriptive_source_references = new Long(0);
  99
 100         // ............................................
 101
 102         // log the type enum to an int constant:
 103         private Map<String, Long> typeMap_ALL;
 104
 105         // ------------------ variables for CLASSIFICATIONS -----------------------
 106
 107         // int[] anArray = new int[NO_OF_CLASSIFICATIONS];
 108         private static List<Long> no_of_all_taxa_c = new ArrayList<Long>(
 109                         Collections.nCopies(NO_OF_CLASSIFICATIONS, new Long(0)));
 110         private static List<Long> no_of_accepted_taxa_c = new ArrayList<Long>(
 111                         Collections.nCopies(NO_OF_CLASSIFICATIONS, new Long(0)));
 112         private static List<Long> no_of_synonyms_c = new ArrayList<Long>(
 113                         Collections.nCopies(NO_OF_CLASSIFICATIONS, new Long(0)));
 114         private static List<Long> no_of_taxon_names_c = new ArrayList<Long>(
 115                         Collections.nCopies(NO_OF_CLASSIFICATIONS, new Long(0)));
 116         private static List<Long> no_of_descriptive_source_references_c = new ArrayList<Long>(
 117                         Collections.nCopies(NO_OF_CLASSIFICATIONS, new Long(0)));
 118         private static List<Long> no_of_all_references_c = new ArrayList<Long>(
 119                         Collections.nCopies(NO_OF_CLASSIFICATIONS, new Long(0)));
 120         private static List<Long> no_of_nomenclatural_references_c = new ArrayList<Long>(
 121                         Collections.nCopies(NO_OF_CLASSIFICATIONS, new Long(0)));
 122         // we do not count classifications in classifications
 123
 124         // ........................... constant map ..........................
 125
 126         private static final Map<String, List<Long>> typeCountMap_CLASSIFICATION = new HashMap<String, List<Long>>() {
 127                 {
 128                         put("CLASSIFICATION",
 129                                         new ArrayList<Long>(Arrays.asList((Long) null, null, null)));
 130                         put("ALL_TAXA", no_of_all_taxa_c);
 131                         put("ACCEPTED_TAXA", no_of_accepted_taxa_c);
 132                         put("SYNONYMS", no_of_synonyms_c);
 133                         put("TAXON_NAMES", no_of_taxon_names_c);
 134                         put("DESCRIPTIVE_SOURCE_REFERENCES",
 135                                         no_of_descriptive_source_references_c);
 136                         put("ALL_REFERENCES", no_of_all_references_c);
 137                         put("NOMENCLATURAL_REFERENCES", no_of_nomenclatural_references_c);
 138                 }
 139         };
 140
 141         // ****************** services: ************************
 142         @SpringBeanByType
 143         private IStatisticsDao service;
 144         @SpringBeanByType
 145         private IClassificationDao classificationDao;
 146         @SpringBeanByType
 147         private ITaxonDao taxonDao;
 148         @SpringBeanByType
 149         private IReferenceDao referenceDao;
 150         @SpringBeanByType
 151         private IDescriptionDao descriptionDao;
 152         @SpringBeanByType
 153         private IDescriptionElementDao descriptionElementDao;
 154         @SpringBeanByType
 155         private ITaxonNodeDao taxonNodeDao;
 156
 157
 158         @Before
 159         public void setUp() {
 160                 // nodeUuid =UUID.fromString("46cd7e78-f7d5-4c31-937b-2bc5074618c4");
 161                 nodeUuid = UUID.fromString("0b5846e5-b8d2-4ca9-ac51-099286ea4adc");
 162
 163                 AuditEventContextHolder.clearContext();
 164
 165         }
 166
 167         @After
 168         public void tearDown() {
 169                 AuditEventContextHolder.clearContext();
 170         }
 171
 172         @Test
 173         // @DataSet
 174         public void testGetAllChildNodes() {
 175                 List<UUID> result;
 176                 createDataSet();
 177                 for (Classification classification : classifications) {
 178                         TaxonNode root;
 179                         root= createTaxTree(classification);
 180
 181                         result=statisticsDao.getAllChildNodeIds(root.getUuid());
 182                     logger.debug("classification "+ classification.getName()+": ");
 183                     logger.debug("result: "+result.toString());
 184
 185                 }
 186                 if (logger.isTraceEnabled()) {
 187                         print();
 188                 }
 189                 // result=statisticsDao.getAllTaxonIds(nodeUuid);
 190                 // statisticsDao.getAllTaxonIds();
 191                 assertTrue(true);
 192                 // fail("Not yet implemented");
 193         }
 194
 195         private void createDataSet() {
 196                 // create NO_OF_CLASSIFICATIONS classifications
 197                 classifications = new ArrayList<Classification>();
 198
 199                 for (int i = 1; i <= NO_OF_CLASSIFICATIONS; i++) {
 200                         Classification classification = Classification
 201                                         .NewInstance("European Abies" + i);
 202                         classifications.add(classification);
 203                         classificationDao.save(classification);
 204                 }
 205                 // create all taxa, references and synonyms and attach them to one or
 206                 // more classifications
 207
 208                 // variables: flags
 209                 int remainder = NO_OF_ACCEPTED_TAXA;
 210                 Reference sec = ReferenceFactory.newBook();
 211                 boolean secondClassificationForTaxonFlag = false;
 212                 boolean synonymFlag = false;
 213                 boolean tNomRefFlag = false;
 214                 boolean sNomRefFlag = false;
 215                 boolean tDescrSourceRefFlag = false;
 216                 boolean sDescrSourceRefFlag = false;
 217
 218                 // variables: counter (pre-loop)
 219                 int descriptiveElementsPerTaxon = (NO_OF_DESCRIPTIVE_SOURCE_REFERENCES / NO_OF_ACCEPTED_TAXA) + 1;
 220
 221                 int taxaInClass;
 222                 int classiCounter = 0, sharedClassification = 0, synonymCounter = 0, nomRefCounter = 0;
 223
 224                 // iterate over classifications and add taxa
 225                 for (/* see above */; remainder > 0
 226                                 && classiCounter < NO_OF_CLASSIFICATIONS; /* see below */) {
 227
 228                         // compute no of taxa to be created in this classification
 229                         if (classiCounter >= NO_OF_CLASSIFICATIONS - 1) { // last
 230                                                                                                                                 // classification
 231                                                                                                                                 // gets all left
 232                                                                                                                                 // taxa
 233                                 taxaInClass = remainder;
 234                         } else { // take half of left taxa for this class:
 235                                 taxaInClass = remainder / 2;
 236                         }
 237
 238                         // iterate over amount of taxa meant to be in this classification
 239                         for (int taxonCounter = 1; taxonCounter <= taxaInClass; taxonCounter++) {
 240
 241                                 // create a String for the Name
 242                                 RandomStringUtils.randomAlphabetic(10);
 243                                 String randomName = RandomStringUtils.randomAlphabetic(5) + " "
 244                                                 + RandomStringUtils.randomAlphabetic(10);
 245
 246                                 // create a name for the taxon
 247                                 IBotanicalName name = TaxonNameFactory.NewBotanicalInstance(Rank.SPECIES());
 248                                 name.setNameCache(randomName, true);
 249
 250                                 // create nomenclatural reference for taxon name (if left)
 251                                 if (nomRefCounter < NO_OF_NOMENCLATURAL_REFERENCES) {
 252                                         // we remember this taxon has a nomenclatural reference:
 253                                         tNomRefFlag = true;
 254                                         Reference nomRef = ReferenceFactory.newBook();
 255                                         name.setNomenclaturalReference(nomRef);
 256                                         referenceDao.save(nomRef);
 257                                         nomRefCounter++;
 258                                 }
 259
 260                                 // create a new sec for every other taxon
 261                                 if (taxonCounter % 2 != 0) {
 262                                         sec = createSecReference(classiCounter, taxonCounter);
 263                                 }
 264
 265                                 // create the taxon
 266                                 Taxon taxon = Taxon.NewInstance(name, sec);
 267
 268                                 // create descriptions, description sources and their references
 269
 270                                 if (no_of_descriptive_source_references < NO_OF_DESCRIPTIVE_SOURCE_REFERENCES) {
 271
 272                                         tDescrSourceRefFlag = true;
 273
 274                                         // create a description and 2 description elements with
 275                                         // references for taxon name
 276                                         TaxonNameDescription nameDescr = TaxonNameDescription.NewInstance();
 277                                         CommonTaxonName nameElement = CommonTaxonName.NewInstance(
 278                                                         "Veilchen" + taxonCounter, Language.GERMAN());
 279                                         TextData textElement = new TextData();
 280                                         Reference nameElementRef = ReferenceFactory.newArticle();
 281                                         Reference textElementRef = ReferenceFactory
 282                                                         .newBookSection();
 283                                         nameElement.addSource(OriginalSourceType.PrimaryTaxonomicSource, null, null, nameElementRef, "name: ");
 284                                         textElement.addSource(OriginalSourceType.PrimaryTaxonomicSource, null, null, textElementRef, "text: ");
 285                                         nameDescr.addElement(nameElement);
 286                                         nameDescr.addElement(textElement);
 287                                         name.addDescription(nameDescr);
 288                                         // taxon.getName().addDescription(nameDescr);
 289                                         referenceDao.save(nameElementRef);
 290                                         referenceDao.save(textElementRef);
 291                                         descriptionDao.save(nameDescr);
 292
 293                                         // create descriptions, description sources and their
 294                                         // references
 295                                         // for taxon
 296                                         TaxonDescription taxonDescription = new TaxonDescription();
 297                                         for (int i = 0; i < descriptiveElementsPerTaxon; i++) {
 298                                                 DescriptionElementBase descriptionElement = new TextData();
 299                                                 DescriptionElementSource descriptionElementSource = DescriptionElementSource
 300                                                                 .NewInstance(OriginalSourceType.PrimaryTaxonomicSource);
 301                                                 Reference article = ReferenceFactory.newArticle();
 302
 303                                                 descriptionElementSource.setCitation(article);
 304                                                 descriptionElement.addSource(descriptionElementSource);
 305                                                 taxonDescription.addElement(descriptionElement);
 306                                                 referenceDao.save(article);
 307                                                 descriptionElementDao.save(descriptionElement);
 308
 309                                         }
 310                                         descriptionDao.save(taxonDescription);
 311                                         taxon.addDescription(taxonDescription);
 312
 313                                         // create a Specimen for taxon with description, descr.
 314                                         // element and referece
 315                                         //
 316                                         // Specimen specimen = Specimen.NewInstance();
 317                                         // SpecimenDescription specimenDescription =
 318                                         // SpecimenDescription.NewInstance(specimen);
 319                                         // DescriptionElementBase descrElement = new TextData();
 320                                         // Reference specimenRef = ReferenceFactory.newArticle();
 321                                         // descrElement.addSource(null, null, specimenRef, null);
 322                                         //
 323                                         //
 324                                         // descriptionService.save(specimenDescription);
 325                                         // taxon.add(specimen);
 326
 327                                         no_of_descriptive_source_references += descriptiveElementsPerTaxon + 2 + 1;
 328
 329                                 }
 330
 331                                 // add taxon to classification
 332                                 classifications.get(classiCounter).addChildTaxon(taxon, null, null);
 333
 334                                 // now if there are any left, we create a synonym for the taxon
 335                                 if (synonymCounter < NO_OF_SYNONYMS) {
 336                                         synonymFlag = true;
 337                                         randomName = RandomStringUtils.randomAlphabetic(5) + " "
 338                                                         + RandomStringUtils.randomAlphabetic(10);
 339                                         // name for synonym
 340                                         name = TaxonNameFactory.NewBotanicalInstance(Rank.SPECIES());
 341                                         name.setNameCache(randomName, true);
 342
 343                                         // create nomenclatural reference for synonym name (if left)
 344                                         if (nomRefCounter < NO_OF_NOMENCLATURAL_REFERENCES) {
 345                                                 sNomRefFlag = true;
 346                                                 Reference nomRef = ReferenceFactory.newBook();
 347                                                 name.setNomenclaturalReference(nomRef);
 348                                                 referenceDao.save(nomRef);
 349                                                 nomRefCounter++;
 350                                         }
 351
 352                                         if (no_of_descriptive_source_references < NO_OF_DESCRIPTIVE_SOURCE_REFERENCES) {
 353                                                 sDescrSourceRefFlag = true;
 354
 355                                                 // create a description and 2 description elements with
 356                                                 // references for synonym name
 357                                                 TaxonNameDescription nameDescr = TaxonNameDescription.NewInstance();
 358                                                 CommonTaxonName nameElement = CommonTaxonName
 359                                                                 .NewInstance("anderes Veilchen" + taxonCounter,
 360                                                                                 Language.GERMAN());
 361                                                 TextData textElement = new TextData();
 362                                                 Reference nameElementRef = ReferenceFactory.newArticle();
 363                                                 Reference textElementRef = ReferenceFactory.newBookSection();
 364                                                 nameElement.addSource(OriginalSourceType.PrimaryTaxonomicSource, null, null, nameElementRef,"name: ");
 365                                                 textElement.addSource(OriginalSourceType.PrimaryTaxonomicSource, null, null, textElementRef,"text: ");
 366                                                 nameDescr.addElement(nameElement);
 367                                                 nameDescr.addElement(textElement);
 368                                                 name.addDescription(nameDescr);
 369                                                 // taxon.getName().addDescription(nameDescr);
 370                                                 referenceDao.save(nameElementRef);
 371                                                 referenceDao.save(textElementRef);
 372                                                 descriptionDao.save(nameDescr);
 373                                                 no_of_descriptive_source_references += 2;
 374                                         }
 375
 376                                         // create a new reference for every other synonym:
 377                                         if (taxonCounter % 2 != 0) {
 378                                                 sec = createSecReference(classiCounter, taxonCounter);
 379                                         }
 380                                         Synonym synonym = Synonym.NewInstance(name, sec);
 381                                         taxonDao.save(synonym);
 382                                         taxon.addSynonym(synonym,
 383                                                         SynonymType.SYNONYM_OF());
 384
 385                                         synonymCounter++;
 386                                 }
 387
 388                                 // if this is not the last classification and there are
 389                                 // taxa left that should be in more than one classification
 390                                 // we add the taxon to the next class in the list too.
 391                                 if (classiCounter < NO_OF_CLASSIFICATIONS
 392                                                 && sharedClassification < NO_OF_SHARED_TAXA) {
 393                                         classifications.get(classiCounter + 1).addChildTaxon(taxon, null, null);
 394
 395                                         // we remember that this taxon is attached to 2
 396                                         // classifications:
 397                                         secondClassificationForTaxonFlag = true;
 398                                         sharedClassification++;
 399                                         classificationDao.saveOrUpdate(classifications
 400                                                         .get(classiCounter + 1));
 401                                 }
 402
 403                                 taxonDao.save(taxon);
 404                                 classificationDao.saveOrUpdate(classifications
 405                                                 .get(classiCounter));
 406
 407                                 // count the data created with this taxon:
 408                                 int c = classiCounter;
 409
 410                                 if (secondClassificationForTaxonFlag) {
 411                                         c++;
 412                                 }
 413
 414                                 // run the following loop once, if this taxon only belongs to
 415                                 // one
 416                                 // classification.
 417                                 // twice, if it is attached to 2 classifications
 418                                 for (int i = classiCounter; i <= c; i++) {
 419
 420                                         // count everything just created for this taxon:
 421                                         increment(no_of_accepted_taxa_c, i);
 422                                         increment(no_of_taxon_names_c, i);
 423                                         if (tNomRefFlag) {
 424                                                 increment(no_of_nomenclatural_references_c, i);
 425                                         }
 426                                         if (sNomRefFlag) {
 427                                                 increment(no_of_nomenclatural_references_c, i);
 428                                         }
 429                                         if (synonymFlag) {
 430                                                 increment(no_of_synonyms_c, i);
 431                                                 increment(no_of_taxon_names_c, i);
 432                                         }
 433                                         if (taxonCounter % 2 != 0) {
 434                                                 increment(no_of_all_references_c, i);
 435                                                 if (synonymFlag) {
 436                                                         increment(no_of_all_references_c, i);
 437                                                 }
 438                                         }
 439                                         if (tDescrSourceRefFlag) {
 440                                                 increment(no_of_descriptive_source_references_c, i,
 441                                                                 descriptiveElementsPerTaxon + 2);
 442                                         }
 443
 444                                         if (sDescrSourceRefFlag) {
 445                                                 increment(no_of_descriptive_source_references_c, i, 2);
 446                                         }
 447                                 }
 448                                 // put flags back:
 449                                 secondClassificationForTaxonFlag = false;
 450                                 tNomRefFlag = false;
 451                                 sNomRefFlag = false;
 452                                 synonymFlag = false;
 453                                 tDescrSourceRefFlag = false;
 454                                 sDescrSourceRefFlag = false;
 455                         }
 456
 457                         // modify variables (post-loop)
 458                         classiCounter++;
 459                         remainder -= taxaInClass;
 460
 461                 }
 462                 merge(no_of_accepted_taxa_c, no_of_synonyms_c, no_of_all_taxa_c);
 463                 merge(no_of_all_references_c, no_of_nomenclatural_references_c,
 464                                 no_of_all_references_c);
 465
 466                 // TODO Auto-generated method stub
 467
 468         }
 469
 470         /**
 471          * create and count a new sec Reference
 472          *
 473          * @param classiCounter
 474          * @param taxonCounter
 475          * @return
 476          */
 477         private Reference createSecReference(int classiCounter, int taxonCounter) {
 478                 Reference sec;
 479                 sec = ReferenceFactory.newBook();
 480                 sec.setTitle("book " + classiCounter + "." + taxonCounter);
 481                 referenceDao.save(sec);
 482                 no_of_all_references++;
 483                 return sec;
 484         }
 485
 486         /**
 487          * @param no_of_sth
 488          * @param inClassification
 489          * @param increase
 490          */
 491         private void increment(List<Long> no_of_sth, int inClassification,
 492                         int increase) {
 493                 no_of_sth.set(inClassification, (no_of_sth.get(inClassification))
 494                                 + increase);
 495         }
 496
 497         private void increment(List<Long> no_of_sth, int inClassification) {
 498                 increment(no_of_sth, inClassification, 1);
 499         }
 500
 501         private void merge(List<Long> no_of_sth1, List<Long> no_of_sth2,
 502                         List<Long> no_of_sum) {
 503
 504                 for (int i = 0; i < NO_OF_CLASSIFICATIONS; i++) {
 505                         Long sum = no_of_sth1.get(i) + no_of_sth2.get(i);
 506                         no_of_sum.set(i, sum);
 507
 508                 }
 509         }
 510
 511         private TaxonNode createTaxTree(Classification classification) {
 512                 Random rand = new Random();
 513
 514                         Set<TaxonNode> nodes = classification.getAllNodes();
 515                         ArrayList<TaxonNode> children = new ArrayList<>();
 516                         TaxonNode parent = nodes.iterator().next();
 517
 518                         TaxonNode root = parent;
 519                         nodes.remove(parent);
 520                         while (!nodes.isEmpty()) {
 521                                 int n = rand.nextInt(2) + 1;
 522                                 for (int i = 1; i <= n && !(nodes.isEmpty()); i++) {
 523                                         TaxonNode nextNode = nodes.iterator().next();
 524                                         nextNode = parent.addChildNode(nextNode, null, null);
 525                                         children.add(nextNode);
 526                                         nodes.remove(nextNode);
 527                                 }
 528
 529                                 parent = children.get(0);
 530                                 children.remove(0);
 531                         }
 532
 533                 return root;
 534         }
 535
 536         /**
 537          *
 538          */
 539         private void print() {
 540                 for (Classification classification : classifications) {
 541                         System.out.println("Classification:" + classification.toString());
 542                         for (TaxonNode node : classification.getAllNodes()) {
 543                                 System.out.println("\tTaxon: " + node.getTaxon().toString()+" node UUID: "+ node.getUuid());
 544                                 System.out.println(" \t(Name: "
 545                                                 + node.getTaxon().getName().toString() + ")");
 546                                 System.out.print("\tChildren: ");
 547                                 for (TaxonNode childNode : node.getChildNodes()) {
 548                                         System.out.print(/*childNode.getTaxon().getName() + */" node UUID: "+ node.getUuid()+"   ");
 549                                 }
 550                                 System.out.println();
 551
 552                                 if (node.getTaxon().getName().getNomenclaturalReference() != null) {
 553                                         System.out.println(" \t(Nomencl. Ref.: "
 554                                                         + node.getTaxon().getName()
 555                                                                         .getNomenclaturalReference().getId() + ")");
 556                                 }
 557                                 for (Synonym synonym : node.getTaxon().getSynonyms()) {
 558                                         System.out.println("\t\tSynonym: " + synonym.toString());
 559                                         System.out.println(" \t\t(Name: "
 560                                                         + synonym.getName().toString() + ")");
 561                                         if (synonym.getName().getNomenclaturalReference() != null) {
 562                                                 System.out.println(" \t\t(Nomencl. Ref.: "
 563                                                                 + synonym.getName().getNomenclaturalReference()
 564                                                                                 .getId() + ")");
 565                                         }
 566                                         System.out.println();
 567                                 }
 568                         }
 569
 570                 }
 571                 System.out.println();
 572                 System.out.println("end!");
 573
 574         }
 575
 576     /* (non-Javadoc)
 577      * @see eu.etaxonomy.cdm.test.integration.CdmIntegrationTest#createTestData()
 578      */
 579     @Override
 580     public void createTestDataSet() throws FileNotFoundException {
 581         // TODO Auto-generated method stub
 582
 583     }
 584 }