app-import/src/main/java/eu/etaxonomy/cdm/app/faunaEuropaea/FaunaEuropaeaActivator.java

   1 /**
   2 * Copyright (C) 2007 EDIT
   3 * European Distributed Institute of Taxonomy
   4 * http://www.e-taxonomy.eu
   5 *
   6 * The contents of this file are subject to the Mozilla Public License Version 1.1
   7 * See LICENSE.TXT at the top of this package for the full license terms.
   8 */
   9
  10 package eu.etaxonomy.cdm.app.faunaEuropaea;
  11
  12 import java.util.UUID;
  13
  14 import org.apache.log4j.Logger;
  15
  16 import eu.etaxonomy.cdm.api.application.CdmApplicationController;
  17 import eu.etaxonomy.cdm.app.berlinModelImport.TreeCreator;
  18 import eu.etaxonomy.cdm.app.common.CdmDestinations;
  19 import eu.etaxonomy.cdm.database.DbSchemaValidation;
  20 import eu.etaxonomy.cdm.database.ICdmDataSource;
  21 import eu.etaxonomy.cdm.io.common.IImportConfigurator.CHECK;
  22 import eu.etaxonomy.cdm.io.common.IImportConfigurator.DO_REFERENCES;
  23 import eu.etaxonomy.cdm.io.common.CdmDefaultImport;
  24 import eu.etaxonomy.cdm.io.common.Source;
  25 import eu.etaxonomy.cdm.io.faunaEuropaea.FaunaEuropaeaImportConfigurator;
  26 import eu.etaxonomy.cdm.model.description.Feature;
  27 import eu.etaxonomy.cdm.model.description.FeatureNode;
  28 import eu.etaxonomy.cdm.model.description.FeatureTree;
  29 import eu.etaxonomy.cdm.model.name.NomenclaturalCode;
  30
  31 /**
  32  * @author a.babadshanjan
  33  * @created 12.05.2009
  34  */
  35 public class FaunaEuropaeaActivator {
  36         private static final Logger logger = Logger.getLogger(FaunaEuropaeaActivator.class);
  37
  38         static final Source faunaEuropaeaSource = FaunaEuropaeaSources.faunEu();
  39         static final ICdmDataSource cdmDestination = CdmDestinations.cdm_test_anahit();
  40
  41 //      static final CHECK check = CHECK.CHECK_AND_IMPORT;
  42         static final CHECK check = CHECK.IMPORT_WITHOUT_CHECK;
  43 //      static DbSchemaValidation dbSchemaValidation = DbSchemaValidation.CREATE;
  44         static DbSchemaValidation dbSchemaValidation = DbSchemaValidation.UPDATE;
  45 //      static DbSchemaValidation dbSchemaValidation = DbSchemaValidation.VALIDATE;
  46         static final NomenclaturalCode nomenclaturalCode  = NomenclaturalCode.ICZN;
  47
  48 // ****************** ALL *****************************************
  49
  50         static final int limitSave = 1000;
  51
  52 //      static final boolean doAuthors = true;
  53 //      static final boolean doTaxa = true;
  54 //      static final boolean doBasionyms = true;
  55 //      static final boolean doTaxonomicallyIncluded = true;
  56 //      static final boolean doMisappliedNames = true;
  57 //      static final boolean doHeterotypicSynonyms = true;
  58 //      static final DO_REFERENCES doReferences =  DO_REFERENCES.ALL;
  59 //      static final boolean doDistributions = true;
  60 //      static final boolean makeFeatureTree = true;
  61
  62 // ************************ NONE **************************************** //
  63
  64         static final boolean doAuthors = false;
  65         static final boolean doTaxa = false;
  66         static final boolean doBasionyms = false;
  67         static final boolean doTaxonomicallyIncluded = false;
  68         static final boolean doMisappliedNames = true;
  69         static final boolean doHeterotypicSynonyms = false;
  70         static final DO_REFERENCES doReferences =  DO_REFERENCES.NONE;
  71         static final boolean doDistributions = false;
  72         static final boolean makeFeatureTree = false;
  73
  74
  75         /**
  76          * @param args
  77          */
  78         public static void main(String[] args) {
  79                 System.out.println("Start import from Fauna Europaea ("+ faunaEuropaeaSource.getDatabase() + ") ...");
  80
  81                 ICdmDataSource destination = cdmDestination;
  82
  83                 FaunaEuropaeaImportConfigurator fauEuImportConfigurator =
  84                         FaunaEuropaeaImportConfigurator.NewInstance(faunaEuropaeaSource,  destination);
  85
  86                 fauEuImportConfigurator.setDbSchemaValidation(dbSchemaValidation);
  87                 fauEuImportConfigurator.setNomenclaturalCode(nomenclaturalCode);
  88                 fauEuImportConfigurator.setCheck(check);
  89
  90                 fauEuImportConfigurator.setDoAuthors(doAuthors);
  91                 fauEuImportConfigurator.setDoTaxa(doTaxa);
  92                 fauEuImportConfigurator.setDoReferences(doReferences);
  93                 fauEuImportConfigurator.setDoOccurrence(doDistributions);
  94                 fauEuImportConfigurator.setDoTaxonomicallyIncluded(doTaxonomicallyIncluded);
  95                 fauEuImportConfigurator.setDoBasionyms(doBasionyms);
  96                 fauEuImportConfigurator.setDoMisappliedNames(doMisappliedNames);
  97                 fauEuImportConfigurator.setDoHeterotypicSynonyms(doHeterotypicSynonyms);
  98                 fauEuImportConfigurator.setLimitSave(limitSave);
  99
 100                 // invoke import
 101                 CdmDefaultImport<FaunaEuropaeaImportConfigurator> fauEuImport =
 102                         new CdmDefaultImport<FaunaEuropaeaImportConfigurator>();
 103                 fauEuImport.invoke(fauEuImportConfigurator);
 104
 105                 //make feature tree
 106
 107                 if (makeFeatureTree == true) {
 108                         FeatureTree featureTree = FeatureTree.NewInstance(UUID.fromString("ff59b9ad-1fb8-4aa4-a8ba-79d62123d0fb"));
 109                         FeatureNode root = featureTree.getRoot();
 110
 111                         CdmApplicationController app = fauEuImport.getCdmAppController();
 112                         Feature citationFeature = (Feature)app.getTermService().getTermByUuid(UUID.fromString("99b2842f-9aa7-42fa-bd5f-7285311e0101"));
 113                         FeatureNode citationNode = FeatureNode.NewInstance(citationFeature);
 114                         root.addChild(citationNode);
 115                         Feature distributionFeature = (Feature)app.getTermService().getTermByUuid(UUID.fromString("9fc9d10c-ba50-49ee-b174-ce83fc3f80c6"));
 116                         FeatureNode distributionNode = FeatureNode.NewInstance(distributionFeature);
 117                         root.addChild(distributionNode);
 118
 119                         app.getDescriptionService().saveFeatureTree(featureTree);
 120                 }
 121
 122                 System.out.println("End import from Fauna Europaea ("+ faunaEuropaeaSource.getDatabase() + ")...");
 123         }
 124
 125 }