cdmlib-services/src/test/java/eu/etaxonomy/cdm/api/service/ClassificationServiceImplTest.java

   1 // $Id$
   2 /**
   3 * Copyright (C) 2007 EDIT
   4 * European Distributed Institute of Taxonomy
   5 * http://www.e-taxonomy.eu
   6 *
   7 * The contents of this file are subject to the Mozilla Public License Version 1.1
   8 * See LICENSE.TXT at the top of this package for the full license terms.
   9 */
  10
  11 package eu.etaxonomy.cdm.api.service;
  12
  13 import java.io.FileNotFoundException;
  14 import java.util.Arrays;
  15 import java.util.Collections;
  16 import java.util.Comparator;
  17 import java.util.List;
  18 import java.util.UUID;
  19
  20 import org.apache.log4j.Level;
  21 import org.apache.log4j.Logger;
  22 import org.junit.Assert;
  23 import org.junit.Ignore;
  24 import org.junit.Test;
  25 import org.unitils.dbunit.annotation.DataSet;
  26 import org.unitils.spring.annotation.SpringBeanByType;
  27
  28 import eu.etaxonomy.cdm.model.name.Rank;
  29 import eu.etaxonomy.cdm.model.taxon.Classification;
  30 import eu.etaxonomy.cdm.model.taxon.TaxonNode;
  31 import eu.etaxonomy.cdm.model.taxon.TaxonNodeByNameComparator;
  32 import eu.etaxonomy.cdm.test.integration.CdmIntegrationTest;
  33
  34 /**
  35  * @author n.hoffmann
  36  * @created Sep 22, 2009
  37  * @version 1.0
  38  */
  39 public class ClassificationServiceImplTest extends CdmIntegrationTest{
  40
  41     private static final Logger logger = Logger.getLogger(ClassificationServiceImplTest.class);
  42
  43     @SpringBeanByType
  44     IClassificationService service;
  45
  46     @SpringBeanByType
  47     ITaxonNodeService taxonNodeService;
  48     private static final List<String> NODE_INIT_STRATEGY = Arrays.asList(new String[]{
  49             "childNodes",
  50             "childNodes.taxon",
  51             "childNodes.taxon.name",
  52             "taxon.sec",
  53             "taxon.name.*"
  54             });
  55
  56     private Comparator<? super TaxonNode> taxonNodeComparator;
  57
  58
  59     /**
  60      * Test method for {@link eu.etaxonomy.cdm.api.service.ClassificationServiceImpl#setTaxonNodeComparator(eu.etaxonomy.cdm.model.taxon.ITaxonNodeComparator)}.
  61      */
  62 //    @Test
  63     public final void testSetTaxonNodeComparator() {
  64
  65
  66 //              fail("Not yet implemented");
  67     }
  68
  69     /**
  70      * Test method for {@link eu.etaxonomy.cdm.api.service.ClassificationServiceImpl#loadTaxonNodeByTaxon(eu.etaxonomy.cdm.model.taxon.Taxon, java.util.UUID, java.util.List)}.
  71      */
  72 //    @Test
  73     public final void testLoadTaxonNodeByTaxon() {
  74 //              fail("Not yet implemented");
  75     }
  76
  77     /**
  78      * Test method for {@link eu.etaxonomy.cdm.api.service.ClassificationServiceImpl#loadTaxonNode(eu.etaxonomy.cdm.model.taxon.TaxonNode, java.util.List)}.
  79      */
  80     @Test
  81     public final void testLoadTaxonNode() {
  82 //              fail("Not yet implemented");
  83     }
  84
  85
  86     @Test
  87     @DataSet
  88     public final void testTaxonNodeByNameComparator() {
  89         taxonNodeComparator = new TaxonNodeByNameComparator();
  90         Classification classification = service.find(UUID.fromString("6c2bc8d9-ee62-4222-be89-4a8e31770878"));
  91
  92 //      try {
  93 //                      printDataSet(new FileOutputStream(new File("testTaxonNodeByNameComparator-dump.xml")), new String[] {"DefinedTermBase"});
  94 //              } catch (FileNotFoundException e) {
  95 //                      /* IGNORE */
  96 //              }
  97
  98         //List<TaxonNode> taxonNodes = service.loadRankSpecificRootNodes(classification, Rank.GENUS(), NODE_INIT_STRATEGY);
  99
 100         List<TaxonNode> taxonNodes = service.getAllNodes();
 101         for (TaxonNode node: taxonNodes){
 102             taxonNodeService.load(node.getUuid(), NODE_INIT_STRATEGY);
 103         }
 104         TaxonNode nodeGenus = taxonNodeService.find(UUID.fromString("19a4fce2-8be5-4ec7-a6a7-f3974047ba5f"));
 105         int index = taxonNodes.indexOf(nodeGenus);
 106         taxonNodes.remove(index);
 107         Collections.sort(taxonNodes, taxonNodeComparator);
 108
 109         /**
 110          * expected order is:
 111          *  Acacia subg. Aculeiferum Pedley
 112          *  Acacia sect. Botrycephalae Yuji Sasaki
 113          *  Acacia subg. Phyllodineae N.Jacobsen, Bastm. & Yuji Sasaki
 114          *  Acacia cuspidifolia Maslin
 115          *  Acacia mearnsii Benth
 116          */
 117
 118         logger.setLevel(Level.DEBUG);
 119         if(logger.isDebugEnabled()){
 120             logger.debug("-------------");
 121                 for (TaxonNode node: taxonNodes){
 122                         if (node!= null && node.getTaxon() != null && node.getTaxon().getName()!= null){
 123                         logger.debug(node.getTaxon().getName().getTitleCache() );
 124                         }
 125                     /*for (TaxonNode child : node.getChildNodes()){
 126                             logger.debug(child.getTaxon().getName().getTitleCache());
 127                     }*/
 128                 }
 129         }
 130
 131         Assert.assertEquals("Acacia subg. Aculeiferum Pedley", taxonNodes.get(1).getTaxon().getName().getTitleCache());
 132
 133         /*
 134         ((TaxonNodeByNameComparator)taxonNodeComparator).setSortInfraGenericFirst(false);
 135         Collections.sort(taxonNodes, taxonNodeComparator);
 136
 137         Assert.assertEquals("Acacia cuspidifolia Maslin", taxonNodes.get(0).getTaxon().getName().getTitleCache());
 138         System.err.println();
 139         for (TaxonNode node: taxonNodes){
 140             System.err.println(node.getTaxon().getName().getTitleCache() );
 141             /*for (TaxonNode child : node.getChildNodes()){
 142                 System.err.println(child.getTaxon().getName().getTitleCache());
 143             }
 144         }*/
 145 //              fail("Not yet implemented");
 146
 147     }
 148
 149
 150     /**
 151      * Test method for {@link eu.etaxonomy.cdm.api.service.ClassificationServiceImpl#loadRankSpecificRootNodes(eu.etaxonomy.cdm.model.taxon.Classification, eu.etaxonomy.cdm.model.name.Rank, java.util.List)}.
 152      */
 153     @Test
 154     @DataSet
 155     public final void testlistRankSpecificRootNodes(){
 156         Classification classification = service.find(UUID.fromString("6c2bc8d9-ee62-4222-be89-4a8e31770878"));
 157
 158         List<TaxonNode> taxonNodes = service.listRankSpecificRootNodes(null, null, null, null, NODE_INIT_STRATEGY);
 159         Assert.assertEquals(1, taxonNodes.size());
 160
 161         taxonNodes = service.listRankSpecificRootNodes(classification, null, null, null, NODE_INIT_STRATEGY);
 162         Assert.assertEquals(1, taxonNodes.size());
 163
 164         taxonNodes = service.listRankSpecificRootNodes(classification, Rank.SECTION_BOTANY(), null, null, NODE_INIT_STRATEGY);
 165         Assert.assertEquals(2, taxonNodes.size());
 166
 167     }
 168
 169     /**
 170      * Test method for {@link eu.etaxonomy.cdm.api.service.ClassificationServiceImpl#loadTreeBranch(eu.etaxonomy.cdm.model.taxon.TaxonNode, eu.etaxonomy.cdm.model.name.Rank, java.util.List)}.
 171      */
 172 //    @Test
 173     public final void testLoadTreeBranch() {
 174 //              fail("Not yet implemented");
 175     }
 176
 177     /**
 178      * Test method for {@link eu.etaxonomy.cdm.api.service.ClassificationServiceImpl#loadTreeBranchToTaxon(eu.etaxonomy.cdm.model.taxon.Taxon, eu.etaxonomy.cdm.model.taxon.Classification, eu.etaxonomy.cdm.model.name.Rank, java.util.List)}.
 179      */
 180 //    @Test
 181     public final void testLoadTreeBranchToTaxon() {
 182 //              fail("Not yet implemented");
 183     }
 184
 185     /**
 186      * Test method for {@link eu.etaxonomy.cdm.api.service.ClassificationServiceImpl#loadChildNodesOfTaxonNode(eu.etaxonomy.cdm.model.taxon.TaxonNode, java.util.List)}.
 187      */
 188 //    @Test
 189     public final void testLoadChildNodesOfTaxonNode() {
 190 //              fail("Not yet implemented");
 191     }
 192
 193     /**
 194      * Test method for {@link eu.etaxonomy.cdm.api.service.ClassificationServiceImpl#loadChildNodesOfTaxon(eu.etaxonomy.cdm.model.taxon.Taxon, eu.etaxonomy.cdm.model.taxon.Classification, java.util.List)}.
 195      */
 196 //    @Test
 197     public final void testLoadChildNodesOfTaxon() {
 198 //              fail("Not yet implemented");
 199     }
 200
 201     /**
 202      * Test method for {@link eu.etaxonomy.cdm.api.service.ClassificationServiceImpl#getTaxonNodeByUuid(java.util.UUID)}.
 203      */
 204 //    @Test
 205     public final void testGetTaxonNodeByUuid() {
 206 //              fail("Not yet implemented");
 207     }
 208
 209     /**
 210      * Test method for {@link eu.etaxonomy.cdm.api.service.ClassificationServiceImpl#getTreeNodeByUuid(java.util.UUID)}.
 211      */
 212 //    @Test
 213     public final void testGetTreeNodeByUuid() {
 214 //              fail("Not yet implemented");
 215     }
 216
 217     /**
 218      * Test method for {@link eu.etaxonomy.cdm.api.service.ClassificationServiceImpl#listClassifications(java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)}.
 219      */
 220 //    @Test
 221     public final void testListClassifications() {
 222 //              fail("Not yet implemented");
 223     }
 224
 225     /**
 226      * Test method for {@link eu.etaxonomy.cdm.api.service.ClassificationServiceImpl#getClassificationByUuid(java.util.UUID)}.
 227      */
 228 //    @Test
 229     public final void testGetClassificationByUuid() {
 230 //              fail("Not yet implemented");
 231     }
 232
 233     /**
 234      * Test method for {@link eu.etaxonomy.cdm.api.service.ClassificationServiceImpl#removeTaxonNode(eu.etaxonomy.cdm.model.taxon.TaxonNode)}.
 235      */
 236 //    @Test
 237     public final void testRemoveTaxonNode() {
 238 //              fail("Not yet implemented");
 239     }
 240
 241     /**
 242      * Test method for {@link eu.etaxonomy.cdm.api.service.ClassificationServiceImpl#removeTreeNode(eu.etaxonomy.cdm.model.taxon.ITreeNode)}.
 243      */
 244 //    @Test
 245     public final void testRemoveTreeNode() {
 246 //              fail("Not yet implemented");
 247     }
 248
 249     /**
 250      * Test method for {@link eu.etaxonomy.cdm.api.service.ClassificationServiceImpl#saveTaxonNode(eu.etaxonomy.cdm.model.taxon.TaxonNode)}.
 251      */
 252 //    @Test
 253     public final void testSaveTaxonNode() {
 254 //              fail("Not yet implemented");
 255     }
 256
 257     /**
 258      * Test method for {@link eu.etaxonomy.cdm.api.service.ClassificationServiceImpl#saveTaxonNodeAll(java.util.Collection)}.
 259      */
 260 //    @Test
 261     public final void testSaveTaxonNodeAll() {
 262 //              fail("Not yet implemented");
 263     }
 264
 265     /**
 266      * Test method for {@link eu.etaxonomy.cdm.api.service.ClassificationServiceImpl#saveTreeNode(eu.etaxonomy.cdm.model.taxon.ITreeNode)}.
 267      */
 268 //    @Test
 269     public final void testSaveTreeNode() {
 270 //              fail("Not yet implemented");
 271     }
 272
 273     /**
 274      * Test method for {@link eu.etaxonomy.cdm.api.service.ClassificationServiceImpl#getTaxonNodeUuidAndTitleCacheOfAcceptedTaxaByClassification(eu.etaxonomy.cdm.model.taxon.Classification)}.
 275      */
 276 //    @Test
 277     public final void testGetTaxonNodeUuidAndTitleCacheOfAcceptedTaxaByClassification() {
 278 //              fail("Not yet implemented");
 279     }
 280
 281     /**
 282      * Test method for {@link eu.etaxonomy.cdm.api.service.ClassificationServiceImpl#getUuidAndTitleCache()}.
 283      */
 284 //    @Test
 285     public final void testGetUuidAndTitleCache() {
 286 //              fail("Not yet implemented");
 287     }
 288
 289     /**
 290      * Test method for {@link eu.etaxonomy.cdm.api.service.ClassificationServiceImpl#getAllMediaForChildNodes(eu.etaxonomy.cdm.model.taxon.TaxonNode, java.util.List, int, int, int, java.lang.String[])}.
 291      */
 292 //    @Test
 293     public final void testGetAllMediaForChildNodesTaxonNodeListOfStringIntIntIntStringArray() {
 294 //              fail("Not yet implemented");
 295     }
 296
 297     /**
 298      * Test method for {@link eu.etaxonomy.cdm.api.service.ClassificationServiceImpl#getAllMediaForChildNodes(eu.etaxonomy.cdm.model.taxon.Taxon, eu.etaxonomy.cdm.model.taxon.Classification, java.util.List, int, int, int, java.lang.String[])}.
 299      */
 300 //    @Test
 301     public final void testGetAllMediaForChildNodesTaxonClassificationListOfStringIntIntIntStringArray() {
 302 //              fail("Not yet implemented");
 303     }
 304
 305     /**
 306      * Test method for {@link eu.etaxonomy.cdm.api.service.ClassificationServiceImpl#setDao(eu.etaxonomy.cdm.persistence.dao.taxon.IClassificationDao)}.
 307      */
 308     @Test
 309     public final void testSetDaoIClassificationDao() {
 310         Assert.assertNotNull(service);
 311     }
 312
 313     /**
 314      * Test method for {@link eu.etaxonomy.cdm.api.service.ClassificationServiceImpl#generateTitleCache()}.
 315      */
 316 //    @Test
 317     public final void testGenerateTitleCache() {
 318 //              fail("Not yet implemented");
 319     }
 320
 321     /* (non-Javadoc)
 322      * @see eu.etaxonomy.cdm.test.integration.CdmIntegrationTest#createTestData()
 323      */
 324     @Override
 325     public void createTestDataSet() throws FileNotFoundException {
 326         // TODO Auto-generated method stub
 327
 328     }
 329 }