cdmlib-io/src/main/java/eu/etaxonomy/cdm/io/tcsxml/in/TcsXmlPublicationsImport.java

   1 /**
   2 * Copyright (C) 2009 EDIT
   3 * European Distributed Institute of Taxonomy
   4 * http://www.e-taxonomy.eu
   5 *
   6 * The contents of this file are subject to the Mozilla Public License Version 1.1
   7 * See LICENSE.TXT at the top of this package for the full license terms.
   8 */
   9
  10 package eu.etaxonomy.cdm.io.tcsxml.in;
  11
  12 import java.util.List;
  13
  14 import org.apache.log4j.Logger;
  15 import org.jdom.Element;
  16 import org.jdom.Namespace;
  17 import org.springframework.stereotype.Component;
  18
  19 import eu.etaxonomy.cdm.api.service.IReferenceService;
  20 import eu.etaxonomy.cdm.common.DoubleResult;
  21 import eu.etaxonomy.cdm.common.XmlHelp;
  22 import eu.etaxonomy.cdm.io.common.ICdmIO;
  23 import eu.etaxonomy.cdm.io.common.IImportConfigurator;
  24 import eu.etaxonomy.cdm.io.common.ImportHelper;
  25 import eu.etaxonomy.cdm.io.common.MapWrapper;
  26 import eu.etaxonomy.cdm.model.reference.Reference;
  27 import eu.etaxonomy.cdm.model.reference.ReferenceFactory;
  28
  29 /**
  30  * @author a.mueller
  31  *
  32  */
  33 @Component
  34 public class TcsXmlPublicationsImport extends TcsXmlImportBase implements ICdmIO<TcsXmlImportState> {
  35         private static final Logger logger = Logger.getLogger(TcsXmlPublicationsImport.class);
  36
  37         private static int modCount = 1000;
  38
  39         public TcsXmlPublicationsImport(){
  40                 super();
  41         }
  42
  43         @Override
  44         public boolean doCheck(TcsXmlImportState state){
  45                 boolean result = true;
  46                 result &= checkArticlesWithoutJournal(state.getConfig());
  47                 //result &= checkPartOfJournal(config);
  48
  49                 return result;
  50         }
  51
  52         private static boolean checkArticlesWithoutJournal(IImportConfigurator bmiConfig){
  53                 try {
  54                         boolean result = true;
  55                         //TODO
  56                         //                              result = firstRow = false;
  57 //                      }
  58 //
  59                         return result;
  60                 } catch (Exception e) {
  61                         e.printStackTrace();
  62                         return false;
  63                 }
  64         }
  65
  66
  67
  68         @Override
  69         public void doInvoke(TcsXmlImportState state){
  70
  71                 logger.info("start make Publications ...");
  72                 boolean success = true;
  73                 String childName;
  74                 boolean obligatory;
  75
  76                 MapWrapper<Reference> referenceMap = (MapWrapper<Reference>)state.getStore(ICdmIO.REFERENCE_STORE);
  77                 IReferenceService referenceService = getReferenceService();
  78
  79                 TcsXmlImportConfigurator config = state.getConfig();
  80                 Element elDataSet = getDataSetElement(config);
  81                 Namespace tcsNamespace = config.getTcsXmlNamespace();
  82
  83                 DoubleResult<Element, Boolean> doubleResult;
  84                 childName = "Publications";
  85                 obligatory = false;
  86                 doubleResult = XmlHelp.getSingleChildElement(elDataSet, childName, tcsNamespace, obligatory);
  87                 success &= doubleResult.getSecondResult();
  88                 Element elPublications = doubleResult.getFirstResult();
  89
  90                 String tcsElementName = "Publication";
  91                 String idNamespace = "Publication";
  92                 List<Element> elPublicationList = elPublications.getChildren(tcsElementName, tcsNamespace);
  93
  94                 int i = 0;
  95                 //for each taxonName
  96                 for (Element elPublication : elPublicationList){
  97                         if ((++i % modCount) == 0){ logger.info("publications handled: " + (i-1));}
  98
  99                         //create TaxonName element
 100                         String strId = elPublication.getAttributeValue("id");
 101
 102                         childName = "Simple";
 103                         obligatory = true;
 104                         doubleResult = XmlHelp.getSingleChildElement(elPublication, childName, tcsNamespace, obligatory);
 105                         success &= doubleResult.getSecondResult();
 106                         Element elSimple = doubleResult.getFirstResult();
 107
 108                         String simple = elSimple.getTextNormalize();
 109
 110                         Reference<?> reference = ReferenceFactory.newGeneric();
 111                         reference.setTitleCache(simple, true);
 112
 113                         childName = "PublicationDetailed";
 114                         obligatory = false;
 115                         doubleResult =  XmlHelp.getSingleChildElement(elPublication, childName, tcsNamespace, obligatory);
 116                         success &= doubleResult.getSecondResult();
 117                         Element elPublicationDetailed = doubleResult.getFirstResult();
 118
 119                         success &= config.getPlaceholderClass().makePublicationDetailed(config, elPublicationDetailed, reference);
 120                         ImportHelper.setOriginalSource(reference, config.getSourceReference(), strId, idNamespace);
 121
 122                         referenceMap.put(strId, reference);
 123
 124
 125                 }
 126 //              //save and store in map
 127 //              logger.info("Save nomenclatural references (" + nomRefCount + ")");
 128 //              referenceService.saveReferenceAll(nomRefMap.objects());
 129                 logger.info("Save bibliographical references (" + i +")");
 130                 referenceService.save(referenceMap.objects());
 131
 132                 logger.info("end make publications ...");
 133                 if (!success){
 134                         state.setUnsuccessfull();
 135                 }
 136                 return;
 137         }
 138
 139         /* (non-Javadoc)
 140          * @see eu.etaxonomy.cdm.io.common.CdmIoBase#isIgnore(eu.etaxonomy.cdm.io.common.IImportConfigurator)
 141          */
 142         protected boolean isIgnore(TcsXmlImportState state){
 143                 return (state.getConfig().getDoReferences() == IImportConfigurator.DO_REFERENCES.NONE);
 144         }
 145
 146 }