cdmlib-model/src/main/java/eu/etaxonomy/cdm/format/occurrences/SingleReadFormatter.java

   1 // $Id$
   2 /**
   3 * Copyright (C) 2015 EDIT
   4 * European Distributed Institute of Taxonomy
   5 * http://www.e-taxonomy.eu
   6 *
   7 * The contents of this file are subject to the Mozilla Public License Version 1.1
   8 * See LICENSE.TXT at the top of this package for the full license terms.
   9 */
  10 package eu.etaxonomy.cdm.format.occurrences;
  11
  12 import eu.etaxonomy.cdm.model.molecular.SingleRead;
  13
  14 /**
  15  * @author pplitzner
  16  * @date Nov 30, 2015
  17  *
  18  */
  19 public class SingleReadFormatter extends AbstractCdmFormatter {
  20
  21     public SingleReadFormatter(Object object, FormatKey[] formatKeys) {
  22         super(object, formatKeys);
  23     }
  24
  25     @Override
  26     protected void initFormatKeys(Object object, FormatKey... formatKeys) {
  27         super.initFormatKeys(object);
  28         SingleRead singleRead = (SingleRead)object;
  29         if(singleRead.getPrimer()!=null){
  30             formatKeyMap.put(FormatKey.SINGLE_READ_PRIMER, singleRead.getPrimer().getLabel());
  31         }
  32         if(singleRead.getAmplificationResult()!=null &&
  33                 singleRead.getAmplificationResult().getAmplification()!=null){
  34             formatKeyMap.put(FormatKey.AMPLIFICATION_LABEL, singleRead.getAmplificationResult().getAmplification().getLabelCache());
  35         }
  36     }
  37
  38 }