--- /dev/null
+/**
+* Copyright (C) 2016 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+package eu.etaxonomy.cdm.app.greece;
+
+import java.net.URI;
+import java.util.UUID;
+
+import org.apache.log4j.Logger;
+
+import eu.etaxonomy.cdm.app.common.CdmDestinations;
+import eu.etaxonomy.cdm.database.DbSchemaValidation;
+import eu.etaxonomy.cdm.database.ICdmDataSource;
+import eu.etaxonomy.cdm.io.common.CdmDefaultImport;
+import eu.etaxonomy.cdm.io.common.IImportConfigurator.CHECK;
+import eu.etaxonomy.cdm.io.common.ImportResult;
+import eu.etaxonomy.cdm.io.media.in.MediaExcelImportConfigurator;
+import eu.etaxonomy.cdm.model.name.NomenclaturalCode;
+import eu.etaxonomy.cdm.model.reference.Reference;
+import eu.etaxonomy.cdm.model.reference.ReferenceFactory;
+
+/**
+ *
+ * Import for Checklist of Greece.
+ *
+ * https://dev.e-taxonomy.eu/redmine/issues/6286
+ *
+ * @author a.mueller
+ * @date 13.12.2016
+ */
+public class GreeceImageActivator {
+ @SuppressWarnings("unused")
+ private static final Logger logger = Logger.getLogger(GreeceImageActivator.class);
+
+
+// static final ICdmDataSource cdmDestination = CdmDestinations.localH2();
+// static final ICdmDataSource cdmDestination = CdmDestinations.cdm_test_local_mysql_test();
+ static final ICdmDataSource cdmDestination = CdmDestinations.cdm_greece_checklist_production();
+
+// private static final UUID sourceUuid = UUID.fromString("418b5885-08fb-4f1e-ac94-8f5c84b1683d");
+ private static final UUID sourceUuid = UUID.fromString("c3d300f0-86ef-4c65-8727-c594035ed7a7");
+// private static final String fileName = "20171107_sent_1332_images.xlsx";
+ private static final String fileName = "20171110_Turland_433_others_59.xlsx";
+
+
+ //check - import
+ static final CHECK check = CHECK.IMPORT_WITHOUT_CHECK;
+
+ boolean doImages = true;
+
+ private void doImport(ICdmDataSource cdmDestination){
+
+ URI source = greekChecklist(); //just any
+ //make Source
+ MediaExcelImportConfigurator config = MediaExcelImportConfigurator.NewInstance(source, cdmDestination);
+ config.setCheck(check);
+ config.setDbSchemaValidation(DbSchemaValidation.VALIDATE);
+ config.setSourceReference(getSourceReference());
+ config.setNomenclaturalCode(NomenclaturalCode.ICNAFP);
+
+ CdmDefaultImport<MediaExcelImportConfigurator> myImport = new CdmDefaultImport<>();
+ ImportResult result = myImport.invoke(config);
+ System.out.println(result.createReport());
+
+ }
+
+
+ private URI greekChecklist(){
+ return URI.create("file:////BGBM-PESIHPC/Greece/images/" + fileName);
+ }
+
+
+ private Reference getSourceReference(){
+ Reference result = ReferenceFactory.newDatabase();
+ result.setTitle(fileName);
+ result.setUuid(sourceUuid);
+
+ return result;
+ }
+
+ /**
+ * @param args
+ */
+ public static void main(String[] args) {
+ GreeceImageActivator me = new GreeceImageActivator();
+ me.doImport(cdmDestination);
+ System.exit(0);
+ }
+}
--- /dev/null
+/**
+* Copyright (C) 2007 EDIT
+* European Distributed Institute of Taxonomy
+* http://www.e-taxonomy.eu
+*
+* The contents of this file are subject to the Mozilla Public License Version 1.1
+* See LICENSE.TXT at the top of this package for the full license terms.
+*/
+
+package eu.etaxonomy.cdm.app.greece;
+
+import java.net.URI;
+import java.util.HashSet;
+import java.util.List;
+import java.util.Set;
+
+import org.apache.log4j.Logger;
+import org.springframework.transaction.TransactionStatus;
+
+import eu.etaxonomy.cdm.api.application.CdmApplicationController;
+import eu.etaxonomy.cdm.app.common.CdmDestinations;
+import eu.etaxonomy.cdm.common.media.ImageInfo;
+import eu.etaxonomy.cdm.database.DbSchemaValidation;
+import eu.etaxonomy.cdm.database.ICdmDataSource;
+import eu.etaxonomy.cdm.io.api.application.CdmIoApplicationController;
+import eu.etaxonomy.cdm.model.common.CdmBase;
+import eu.etaxonomy.cdm.model.media.ImageFile;
+import eu.etaxonomy.cdm.model.media.Media;
+import eu.etaxonomy.cdm.model.media.MediaRepresentation;
+import eu.etaxonomy.cdm.model.media.MediaRepresentationPart;
+
+/**
+ * @author a.mueller
+ * @created 05.2017
+ */
+public class GreeceLargeImagesAdderActivator {
+ @SuppressWarnings("unused")
+ private static final Logger logger = Logger.getLogger(GreeceLargeImagesAdderActivator.class);
+
+
+// static final ICdmDataSource cdmDestination = CdmDestinations.localH2();
+ static final ICdmDataSource cdmDestination = CdmDestinations.cdm_greece_checklist_production();
+
+ static boolean testOnly = false;
+
+
+ private void addLargeImage(ICdmDataSource cdmDestination){
+ CdmApplicationController app = CdmIoApplicationController.NewInstance(cdmDestination, DbSchemaValidation.VALIDATE);
+ TransactionStatus tx = app.startTransaction();
+
+ List<Media> list = app.getMediaService().list(Media.class, null, null, null, null);
+ for (Media media : list){
+ if (! isFirstImportMedia(media)){
+ continue;
+ }
+ Set<MediaRepresentation> reps = media.getRepresentations();
+ if (reps.size() != 2){
+ System.out.println("Media has not exactly 2 representations: " + media.getId() + "; " + media.getTitleCache());
+ continue;
+ }else{
+ MediaRepresentation first = reps.iterator().next();
+ if (first.getParts().size() != 1){
+ System.out.println("Media has representation with not exactly 1 parts: " + media.getId() + "; " + media.getTitleCache());
+ continue;
+ }
+ MediaRepresentationPart part = first.getParts().iterator().next();
+ String uri = part.getUri().toString();
+ if (uri.startsWith("https://media.e-taxonomy.eu/flora-greece/medium/Plate")){
+ uri = uri.replace("flora-greece/medium/Plate", "flora-greece/large/Plate");
+ }else if(uri.startsWith("https://media.e-taxonomy.eu/flora-greece/thumbs/Plate")) {
+ uri = uri.replace("flora-greece/thumbs/Plate", "flora-greece/large/Plate");
+ }else{
+ System.out.println("URI has unexpected format: " + uri);
+ continue;
+ }
+ handleUri(media, uri);
+ }
+ }
+ if (testOnly){
+ tx.setRollbackOnly();
+ }
+ app.commitTransaction(tx);
+ }
+
+ private void updateImageSizes(ICdmDataSource cdmDestination){
+ CdmApplicationController app = CdmIoApplicationController.NewInstance(cdmDestination, DbSchemaValidation.VALIDATE);
+ TransactionStatus tx = app.startTransaction();
+
+ List<Media> list = app.getMediaService().list(Media.class, null, null, null, null);
+ for (Media media : list){
+ if (! isFirstImportMedia(media)){
+ continue;
+ }
+ Set<MediaRepresentation> reps = media.getRepresentations();
+ for (MediaRepresentation rep : reps){
+ for (MediaRepresentationPart part : rep.getParts()){
+ if (part.isInstanceOf(ImageFile.class)){
+ handlePart(CdmBase.deproxy(part, ImageFile.class));
+ }else{
+ System.out.println("Representation part is not of type ImageFile: "+ part.getId());
+ }
+ }
+ }
+ }
+
+ if (testOnly){
+ tx.setRollbackOnly();
+ }
+ app.commitTransaction(tx);
+
+ }
+
+
+
+ /**
+ * @param media
+ * @return
+ */
+ private boolean isFirstImportMedia(Media media) {
+ Boolean result = null;
+ Set<String> urls = getUrlStringForMedia(media);
+ for (String url : urls){
+ if (url.startsWith("http://150.140.202.8/files/Goula/") || url.startsWith("http://n4412.gr/images/Globula")){
+ if (result == Boolean.TRUE){
+ System.out.println("Ambigous: " + media.getId());
+ return false;
+ }
+ result = false;
+ }else if (url.startsWith("https://media.e-taxonomy.eu/flora-greece")){
+ if (result == Boolean.FALSE){
+ System.out.println("Ambigous: " + media.getId());
+ return false;
+ }
+ result = true;
+ }
+ }
+ if (result == null){
+ System.out.println("No data: " + media.getId());
+ return false;
+ }
+ return result;
+ }
+
+ /**
+ * @param media
+ * @return
+ */
+ private Set<String> getUrlStringForMedia(Media media) {
+ Set<String> result = new HashSet<>();
+ for (MediaRepresentation rep : media.getRepresentations()){
+ for (MediaRepresentationPart part : rep.getParts()){
+ URI uri = part.getUri();
+ if (uri != null){
+ result.add(uri.toString());
+ }else{
+ System.out.println("URI is null:" + media.getId());
+ }
+ }
+ }
+ return result;
+ }
+
+ /**
+ * @param part
+ */
+ private void handlePart(ImageFile part) {
+ ImageInfo imageInfo = null;
+ URI uri = part.getUri();
+ try {
+ imageInfo = ImageInfo.NewInstance(uri, 0);
+ } catch (Exception e) {
+ String message = "An error occurred when trying to read image meta data for %s.";
+ message = String.format(message, uri.toString());
+ System.out.println(message);
+ return;
+ }
+ part.setHeight(imageInfo.getHeight());
+ part.setWidth(imageInfo.getWidth());
+
+ MediaRepresentation representation = part.getMediaRepresentation();
+ representation.setMimeType(imageInfo.getMimeType());
+ representation.setSuffix(imageInfo.getSuffix());
+
+ }
+
+ /**
+ * @param reps
+ * @param uri
+ */
+ private void handleUri(Media media, String uriStr) {
+ URI uri = URI.create(uriStr);
+ ImageInfo imageInfo = null;
+ try {
+ imageInfo = ImageInfo.NewInstance(uri, 0);
+ } catch (Exception e) {
+ String message = "An error occurred when trying to read image meta data for %s.";
+ message = String.format(message, uri.toString());
+ System.out.println(message);
+ }
+ ImageFile imageFile = ImageFile.NewInstance(uri, null, imageInfo);
+
+ MediaRepresentation representation = MediaRepresentation.NewInstance();
+
+ if(imageInfo != null){
+ representation.setMimeType(imageInfo.getMimeType());
+ representation.setSuffix(imageInfo.getSuffix());
+ }
+ representation.addRepresentationPart(imageFile);
+ media.addRepresentation(representation);
+
+ }
+
+
+
+
+ /**
+ * @param args
+ */
+ public static void main(String[] args) {
+ GreeceLargeImagesAdderActivator me = new GreeceLargeImagesAdderActivator();
+// me.addLargeImage(cdmDestination);
+ me.updateImageSizes(cdmDestination);
+// me.test();
+ System.exit(0);
+ }
+
+}
BGBM BDI Projects / cdmlib-apps.git / commitdiff