cdm-pesi/src/main/java/eu/etaxonomy/cdm/io/pesi/erms/ErmsNotesImport.java

   1 /**
   2 * Copyright (C) 2007 EDIT
   3 * European Distributed Institute of Taxonomy
   4 * http://www.e-taxonomy.eu
   5 *
   6 * The contents of this file are subject to the Mozilla Public License Version 1.1
   7 * See LICENSE.TXT at the top of this package for the full license terms.
   8 */
   9
  10 package eu.etaxonomy.cdm.io.pesi.erms;
  11
  12 import java.sql.ResultSet;
  13 import java.sql.SQLException;
  14 import java.util.HashMap;
  15 import java.util.HashSet;
  16 import java.util.Map;
  17 import java.util.Set;
  18
  19 import org.apache.log4j.Logger;
  20 import org.springframework.stereotype.Component;
  21
  22 import eu.etaxonomy.cdm.io.common.IOValidator;
  23 import eu.etaxonomy.cdm.io.common.mapping.DbImportAnnotationMapper;
  24 import eu.etaxonomy.cdm.io.common.mapping.DbImportFeatureCreationMapper;
  25 import eu.etaxonomy.cdm.io.common.mapping.DbImportMapping;
  26 import eu.etaxonomy.cdm.io.common.mapping.DbImportMultiLanguageTextMapper;
  27 import eu.etaxonomy.cdm.io.common.mapping.DbImportTextDataCreationMapper;
  28 import eu.etaxonomy.cdm.io.pesi.erms.validation.ErmsNoteImportValidator;
  29 import eu.etaxonomy.cdm.model.common.Annotation;
  30 import eu.etaxonomy.cdm.model.common.AnnotationType;
  31 import eu.etaxonomy.cdm.model.common.CdmBase;
  32 import eu.etaxonomy.cdm.model.common.Language;
  33 import eu.etaxonomy.cdm.model.description.TextData;
  34 import eu.etaxonomy.cdm.model.taxon.TaxonBase;
  35
  36
  37 /**
  38  * @author a.mueller
  39  * @created 20.02.2010
  40  * @version 1.0
  41  */
  42 @Component
  43 public class ErmsNotesImport  extends ErmsImportBase<Annotation> {
  44         @SuppressWarnings("unused")
  45         private static final Logger logger = Logger.getLogger(ErmsNotesImport.class);
  46
  47         private DbImportMapping mapping;
  48
  49         private int modCount = 10000;
  50         private static final String pluralString = "notes";
  51         private static final String dbTableName = "notes";
  52         private static final Class cdmTargetClass = TextData.class;
  53
  54         public ErmsNotesImport(){
  55                 super(pluralString, dbTableName, cdmTargetClass);
  56         }
  57
  58
  59         /* (non-Javadoc)
  60          * @see eu.etaxonomy.cdm.io.berlinModel.in.BerlinModelImportBase#getRecordQuery(eu.etaxonomy.cdm.io.berlinModel.in.BerlinModelImportConfigurator)
  61          */
  62         @Override
  63         protected String getRecordQuery(ErmsImportConfigurator config) {
  64                 String strRecordQuery =
  65                         " SELECT * " +
  66                         " FROM notes " +
  67                         " WHERE ( notes.id IN (" + ID_LIST_TOKEN + ") )";
  68                 return strRecordQuery;
  69         }
  70
  71         /* (non-Javadoc)
  72          * @see eu.etaxonomy.cdm.io.erms.ErmsImportBase#getMapping()
  73          */
  74         protected DbImportMapping getMapping() {
  75                 if (mapping == null){
  76                         mapping = new DbImportMapping();
  77                         mapping.addMapper(DbImportTextDataCreationMapper.NewInstance("id", NOTES_NAMESPACE, "tu_id", TAXON_NAMESPACE));
  78                         mapping.addMapper(DbImportMultiLanguageTextMapper.NewInstance("note", "lan_id", LANGUAGE_NAMESPACE, "multilanguageText"));
  79                         Language notesNoteLanguage = null;
  80                         mapping.addMapper(DbImportAnnotationMapper.NewInstance("note", AnnotationType.EDITORIAL(), notesNoteLanguage));
  81                         mapping.addMapper(DbImportFeatureCreationMapper.NewInstance("type", FEATURE_NAMESPACE, "type", "type", "type"));
  82                 }
  83                 return mapping;
  84         }
  85
  86
  87         /* (non-Javadoc)
  88          * @see eu.etaxonomy.cdm.io.berlinModel.in.IPartitionedIO#getRelatedObjectsForPartition(java.sql.ResultSet)
  89          */
  90         public Map<Object, Map<String, ? extends CdmBase>> getRelatedObjectsForPartition(ResultSet rs) {
  91                 String nameSpace;
  92                 Class cdmClass;
  93                 Set<String> idSet;
  94                 Map<Object, Map<String, ? extends CdmBase>> result = new HashMap<Object, Map<String, ? extends CdmBase>>();
  95
  96                 try{
  97                         Set<String> taxonIdSet = new HashSet<String>();
  98                         Set<String> languageIdSet = new HashSet<String>();
  99                         while (rs.next()){
 100                                 handleForeignKey(rs, taxonIdSet, "tu_id");
 101                                 handleForeignKey(rs, languageIdSet, "lan_id");
 102                         }
 103
 104                         //taxon map
 105                         nameSpace = ErmsTaxonImport.TAXON_NAMESPACE;
 106                         cdmClass = TaxonBase.class;
 107                         idSet = taxonIdSet;
 108                         Map<String, TaxonBase> taxonMap = (Map<String, TaxonBase>)getCommonService().getSourcedObjectsByIdInSource(cdmClass, idSet, nameSpace);
 109                         result.put(nameSpace, taxonMap);
 110
 111                         //language map
 112                         nameSpace = LANGUAGE_NAMESPACE;
 113                         Map<String, Language> languageMap = new HashMap<String, Language>();
 114                         ErmsTransformer transformer = new ErmsTransformer();
 115                         for (String lanAbbrev: languageIdSet){
 116
 117                                 Language language = transformer.getLanguageByKey(lanAbbrev);
 118                                 languageMap.put(lanAbbrev, language);
 119                         }
 120                         result.put(nameSpace, languageMap);
 121
 122                 } catch (SQLException e) {
 123                         throw new RuntimeException(e);
 124                 }
 125                 return result;
 126         }
 127
 128         /* (non-Javadoc)
 129          * @see eu.etaxonomy.cdm.io.common.CdmIoBase#doCheck(eu.etaxonomy.cdm.io.common.IImportConfigurator)
 130          */
 131         @Override
 132         protected boolean doCheck(ErmsImportState state){
 133                 IOValidator<ErmsImportState> validator = new ErmsNoteImportValidator();
 134                 return validator.validate(state);
 135         }
 136
 137
 138         /* (non-Javadoc)
 139          * @see eu.etaxonomy.cdm.io.common.CdmIoBase#isIgnore(eu.etaxonomy.cdm.io.common.IImportConfigurator)
 140          */
 141         protected boolean isIgnore(ErmsImportState state){
 142                 return ! state.getConfig().isDoNotes();
 143         }
 144
 145
 146
 147
 148
 149 }