app-import/src/main/java/eu/etaxonomy/cdm/app/edaphobase/EdaphobaseActivator.java

   1 /**
   2 * Copyright (C) 2015 EDIT
   3 * European Distributed Institute of Taxonomy
   4 * http://www.e-taxonomy.eu
   5 *
   6 * The contents of this file are subject to the Mozilla Public License Version 1.1
   7 * See LICENSE.TXT at the top of this package for the full license terms.
   8 */
   9 package eu.etaxonomy.cdm.app.edaphobase;
  10
  11 import java.util.UUID;
  12
  13 import org.apache.log4j.Logger;
  14
  15 import eu.etaxonomy.cdm.api.service.ITermService;
  16 import eu.etaxonomy.cdm.app.common.CdmDestinations;
  17 import eu.etaxonomy.cdm.app.common.CdmImportSources;
  18 import eu.etaxonomy.cdm.database.DbSchemaValidation;
  19 import eu.etaxonomy.cdm.database.ICdmDataSource;
  20 import eu.etaxonomy.cdm.io.common.CdmDefaultImport;
  21 import eu.etaxonomy.cdm.io.common.IImportConfigurator.CHECK;
  22 import eu.etaxonomy.cdm.io.common.Source;
  23 import eu.etaxonomy.cdm.io.edaphobase.EdaphobaseImportConfigurator;
  24 import eu.etaxonomy.cdm.model.description.Feature;
  25 import eu.etaxonomy.cdm.model.term.TermNode;
  26 import eu.etaxonomy.cdm.model.term.TermTree;
  27
  28 /**
  29  * @author a.mueller
  30  * @since 04.12.2015
  31  *
  32  */
  33 public class EdaphobaseActivator {
  34     @SuppressWarnings("unused")
  35     private static final Logger logger = Logger.getLogger(EdaphobaseActivator.class);
  36
  37     //database validation status (create, update, validate ...)
  38     static DbSchemaValidation dbSchemaValidation = DbSchemaValidation.CREATE;
  39
  40 //    static final Source edaphoSource = CdmImportSources.EDAPHOBASE();
  41     static final Source edaphoSource = CdmImportSources.EDAPHOBASE8();
  42
  43 //    static final ICdmDataSource cdmDestination = CdmDestinations.localH2();
  44 //    static final ICdmDataSource cdmDestination = CdmDestinations.cdm_local_edaphobase();
  45 //    static final ICdmDataSource cdmDestination = CdmDestinations.cdm_production_edaphobase();
  46 //    static final ICdmDataSource cdmDestination = CdmDestinations.cdm_postgres_edaphobase();
  47 //    static final ICdmDataSource cdmDestination = CdmDestinations.cdm_test_postgres_edaphobase();
  48     static final ICdmDataSource cdmDestination = CdmDestinations.cdm_test_postgres_edaphobase();
  49
  50
  51
  52     //feature tree uuid
  53     private static final UUID featureTreeUuid = UUID.fromString("a543d66a-e310-4b3e-a9fa-b729afefad16");
  54     private static final String featureTreeTitle = "Edaphobase Presentation Feature Tree";
  55
  56     //classification
  57     static final UUID classificationUuid = UUID.fromString("91231ebf-1c7a-47b9-a56c-b45b33137244");
  58     static final String classificationTitle = "Edaphobase";
  59     static final UUID secUuid = UUID.fromString("95dcb1b6-5197-4ce6-b2fa-c6482119d2ea");
  60     static final String secundumTitle = "Edaphobase";
  61
  62     private static final boolean doTaxa = true;
  63     private static final boolean doSynonyms = true;
  64     private static final boolean doReferences = true;
  65     private static final boolean doDescriptions = false;
  66
  67     //logging
  68     private static final boolean ignoreSubgenus = true;
  69     private static final boolean ignore4nomial = true;
  70
  71
  72     //check - import
  73     static CHECK check = CHECK.IMPORT_WITHOUT_CHECK;
  74
  75     private void doImport(Source source, ICdmDataSource cdmDestination){
  76
  77         EdaphobaseImportConfigurator config= EdaphobaseImportConfigurator.NewInstance(source, cdmDestination);
  78         config.setDbSchemaValidation(dbSchemaValidation);
  79         config.setClassificationUuid(classificationUuid);
  80         config.setClassificationName(classificationTitle);
  81         config.setEdaphobaseSecundumTitle(secundumTitle);
  82         config.setSecUuid(secUuid);
  83         config.setDoTaxa(doTaxa);
  84         config.setDoReferences(doReferences);
  85         config.setDoSynonyms(doSynonyms);
  86         config.setDoDescriptions(doDescriptions);
  87         config.setCheck(check);
  88
  89         config.setIgnoreSubgenus(ignoreSubgenus);
  90         config.setIgnore4nomial(ignore4nomial);
  91
  92         CdmDefaultImport<EdaphobaseImportConfigurator> myImport = new CdmDefaultImport<>();
  93         myImport.invoke(config);
  94
  95         TermTree<Feature> tree = makeFeatureNodes(myImport.getCdmAppController().getTermService());
  96         myImport.getCdmAppController().getFeatureTreeService().saveOrUpdate(tree);
  97     }
  98
  99     private TermTree<Feature> makeFeatureNodes(ITermService service){
 100
 101         TermTree<Feature> result = TermTree.NewFeatureInstance(featureTreeUuid);
 102         result.setTitleCache(featureTreeTitle, true);
 103         TermNode<Feature> root = result.getRoot();
 104
 105         Feature distributionFeature = (Feature)service.find(Feature.DISTRIBUTION().getUuid());
 106         root.addChild(distributionFeature);
 107
 108         return result;
 109     }
 110
 111     /**
 112      * @param args
 113      */
 114     public static void main(String[] args) {
 115         EdaphobaseActivator me = new EdaphobaseActivator();
 116         me.doImport(edaphoSource, cdmDestination);
 117         System.exit(0);
 118     }
 119 }