app-import/src/main/java/eu/etaxonomy/cdm/app/vibrant/DwcaScratchpadImportActivator.java

   1 /**
   2 * Copyright (C) 2007 EDIT
   3 * European Distributed Institute of Taxonomy
   4 * http://www.e-taxonomy.eu
   5 *
   6 * The contents of this file are subject to the Mozilla Public License Version 1.1
   7 * See LICENSE.TXT at the top of this package for the full license terms.
   8 */
   9
  10 package eu.etaxonomy.cdm.app.vibrant;
  11
  12 import java.net.URI;
  13
  14 import org.apache.log4j.Logger;
  15
  16 import eu.etaxonomy.cdm.app.common.CdmDestinations;
  17 import eu.etaxonomy.cdm.database.DbSchemaValidation;
  18 import eu.etaxonomy.cdm.database.ICdmDataSource;
  19 import eu.etaxonomy.cdm.io.common.CdmDefaultImport;
  20 import eu.etaxonomy.cdm.io.common.IImportConfigurator.CHECK;
  21 import eu.etaxonomy.cdm.io.common.events.LoggingIoObserver;
  22 import eu.etaxonomy.cdm.io.dwca.in.DwcaImportConfigurator;
  23 import eu.etaxonomy.cdm.io.dwca.in.DwcaImportConfigurator.DatasetUse;
  24 import eu.etaxonomy.cdm.io.dwca.in.IImportMapping.MappingType;
  25 import eu.etaxonomy.cdm.model.name.NomenclaturalCode;
  26 import eu.etaxonomy.cdm.model.reference.Reference;
  27 import eu.etaxonomy.cdm.model.reference.ReferenceFactory;
  28
  29 /**
  30  * @author a.mueller
  31  * @created 03.04.2012
  32  * @version 1.0
  33  */
  34 public class DwcaScratchpadImportActivator {
  35         @SuppressWarnings("unused")
  36         private static final Logger logger = Logger.getLogger(DwcaScratchpadImportActivator.class);
  37
  38         //database validation status (create, update, validate ...)
  39         static DbSchemaValidation hbm2dll = DbSchemaValidation.CREATE;
  40         static final URI source = dwca_test_scratch_test();
  41
  42
  43 //      static final ICdmDataSource cdmDestination = CdmDestinations.localH2();
  44         static final ICdmDataSource cdmDestination = CdmDestinations.cdm_test_local_mysql_dwca();
  45 //      static final ICdmDataSource cdmDestination = CdmDestinations.cdm_test_local_mysql_test();
  46
  47
  48         //default nom code is ICZN as it allows adding publication year
  49         static final NomenclaturalCode defaultNomCode = NomenclaturalCode.ICZN;
  50
  51
  52         //check - import
  53         static final CHECK check = CHECK.IMPORT_WITHOUT_CHECK;
  54
  55         //config
  56         static DatasetUse datasetUse = DatasetUse.CLASSIFICATION;
  57
  58         //validate
  59         static boolean validateRankConsistency = true;
  60
  61
  62         //taxa
  63         static final boolean doTaxa = true;
  64
  65
  66
  67         static final MappingType mappingType = MappingType.InMemoryMapping;
  68
  69         private void doImport(ICdmDataSource cdmDestination){
  70
  71                 //make Source
  72                 DwcaImportConfigurator config= DwcaImportConfigurator.NewInstance(source, cdmDestination);
  73                 config.addObserver(new LoggingIoObserver());
  74                 config.setCheck(check);
  75                 config.setDbSchemaValidation(hbm2dll);
  76                 config.setMappingType(mappingType);
  77                 config.setValidateRankConsistency(validateRankConsistency);
  78                 config.setNomenclaturalCode(defaultNomCode);
  79
  80                 CdmDefaultImport myImport = new CdmDefaultImport();
  81
  82
  83                 //...
  84                 if (true){
  85                         System.out.println("Start import from ("+ source.toString() + ") ...");
  86                         config.setSourceReference(getSourceReference(config.getSourceReferenceTitle()));
  87                         myImport.invoke(config);
  88                         System.out.println("End import from ("+ source.toString() + ")...");
  89                 }
  90
  91
  92         }
  93
  94         private Reference<?> getSourceReference(String string) {
  95                 Reference<?> result = ReferenceFactory.newGeneric();
  96                 result.setTitleCache(string);
  97                 return result;
  98         }
  99
 100
 101         //Scratchpads test
 102         public static URI dwca_test_scratch_test() {
 103                 URI sourceUrl = URI.create("file:////PESIIMPORT3/vibrant/dwca/dwca_export_scratchpads_test.zip");
 104                 return sourceUrl;
 105         }
 106
 107
 108         /**
 109          * @param args
 110          */
 111         public static void main(String[] args) {
 112                 DwcaScratchpadImportActivator me = new DwcaScratchpadImportActivator();
 113                 me.doImport(cdmDestination);
 114         }
 115
 116 }