app-import/src/main/java/eu/etaxonomy/cdm/app/jaxb/JaxbExportActivator.java

   1 /**
   2  * Copyright (C) 2008 EDIT
   3  * European Distributed Institute of Taxonomy
   4  * http://www.e-taxonomy.eu
   5  *
   6  * The contents of this file are subject to the Mozilla Public License Version 1.1
   7  * See LICENSE.TXT at the top of this package for the full license terms.
   8  */
   9 package eu.etaxonomy.cdm.app.jaxb;
  10
  11 import java.io.File;
  12 import java.io.FileNotFoundException;
  13 import java.io.FileOutputStream;
  14 import java.io.OutputStreamWriter;
  15 import java.io.PrintWriter;
  16 import java.io.UnsupportedEncodingException;
  17
  18 import org.apache.logging.log4j.LogManager;
  19 import org.apache.logging.log4j.Logger;
  20
  21 import eu.etaxonomy.cdm.api.application.CdmApplicationController;
  22 import eu.etaxonomy.cdm.app.common.CdmDestinations;
  23 import eu.etaxonomy.cdm.app.common.tasks.TestDatabase;
  24 import eu.etaxonomy.cdm.common.URI;
  25 import eu.etaxonomy.cdm.database.DbSchemaValidation;
  26 import eu.etaxonomy.cdm.database.ICdmDataSource;
  27 import eu.etaxonomy.cdm.io.common.CdmDefaultExport;
  28 import eu.etaxonomy.cdm.io.jaxb.JaxbExportConfigurator;
  29
  30 /**
  31  * @author a.babadshanjan
  32  * @since 25.09.2008
  33  */
  34 public class JaxbExportActivator {
  35
  36         /* SerializeFrom DB **/
  37 //      private static final ICdmDataSource cdmSource = CdmDestinations.localH2();
  38         private static final ICdmDataSource cdmSource = CdmDestinations.cdm_production_flora_deutschland();
  39
  40         // Export:
  41         private static String exportFileName = "file:/F:/data/redlist/standardliste/standardliste_jaxb.xml";
  42
  43         /** NUMBER_ROWS_TO_RETRIEVE = 0 is the default case to retrieve all rows.
  44          * For testing purposes: If NUMBER_ROWS_TO_RETRIEVE >0 then retrieve
  45          *  as many rows as specified for agents, references, etc.
  46          *  Only root taxa and no synonyms and relationships are retrieved. */
  47         private static final int NUMBER_ROWS_TO_RETRIEVE = 0;
  48
  49     private static final Logger logger = LogManager.getLogger();
  50
  51         private void invokeExport(ICdmDataSource sourceParam, File file) {
  52 //              String server = "localhost";
  53 //              String database = "EDITimport";
  54 //              String username = "edit";
  55 //              sourceParam = CdmDataSource.NewMySqlInstance(server, database, username, AccountStore.readOrStorePassword(server, database, username, null));
  56
  57                 JaxbExportConfigurator jaxbExportConfigurator;
  58                 if (file !=null && sourceParam != null){
  59                         jaxbExportConfigurator = JaxbExportConfigurator.NewInstance(sourceParam, file);
  60                 }else if (sourceParam != null){
  61                         jaxbExportConfigurator = JaxbExportConfigurator.NewInstance(sourceParam, new File(exportFileName));
  62                 } else if (file !=null ){
  63                         jaxbExportConfigurator = JaxbExportConfigurator.NewInstance(cdmSource, file);
  64                 } else{
  65                         jaxbExportConfigurator = JaxbExportConfigurator.NewInstance(cdmSource, new File(exportFileName));
  66                 }
  67
  68                 CdmDefaultExport<JaxbExportConfigurator> jaxbExport =
  69                         new CdmDefaultExport<JaxbExportConfigurator>();
  70
  71                 // invoke export
  72                 logger.debug("Invoking Jaxb export");
  73                 jaxbExport.invoke(jaxbExportConfigurator);
  74
  75         }
  76         public static String chooseFile(String[] args) {
  77                 if(args == null) {
  78             return null;
  79         }
  80                 for (String dest: args){
  81                         if (dest.endsWith(".xml")){
  82                                 return args[0];
  83                         }
  84                 }
  85                 return null;
  86         }
  87
  88         private CdmApplicationController initDb(ICdmDataSource db) {
  89                 // Init source DB
  90                 CdmApplicationController appCtrInit = TestDatabase.initDb(db, DbSchemaValidation.VALIDATE, false);
  91                 return appCtrInit;
  92         }
  93
  94         // Load test data to DB
  95         private void loadTestData(CdmApplicationController appCtrInit) {
  96                 TestDatabase.loadTestData("", appCtrInit);
  97         }
  98
  99         public static void main(String[] args) {
 100
 101                 JaxbExportActivator sc = new JaxbExportActivator();
 102                 ICdmDataSource source = CdmDestinations.chooseDestination(args) != null ? CdmDestinations.chooseDestination(args) : cdmSource;
 103                 String file = chooseFile(args);
 104                 if (file == null){
 105                         file = exportFileName;
 106                 }
 107                 URI uri = URI.create(file);
 108                 try {
 109                         File myFile = new File(uri.getJavaUri());
 110                         PrintWriter writer = new PrintWriter(new OutputStreamWriter(new FileOutputStream(myFile), "UTF8"), true);
 111                         sc.initDb(source);  //does this make sense here (it starts the appControler even if it is not needed later
 112
 113                         sc.invokeExport(source, new File(file));
 114                 } catch (UnsupportedEncodingException e) {
 115                         // TODO Auto-generated catch block
 116                         e.printStackTrace();
 117                 } catch (FileNotFoundException e) {
 118                         // TODO Auto-generated catch block
 119                         e.printStackTrace();
 120                 }
 121         }
 122 }