cdm-pesi/src/main/java/eu/etaxonomy/cdm/app/pesi/PesiExportActivatorFE.java

   1 /**
   2 * Copyright (C) 2009 EDIT
   3 * European Distributed Institute of Taxonomy
   4 * http://www.e-taxonomy.eu
   5 *
   6 * The contents of this file are subject to the Mozilla Public License Version 1.1
   7 * See LICENSE.TXT at the top of this package for the full license terms.
   8 */
   9 package eu.etaxonomy.cdm.app.pesi;
  10
  11 import org.apache.log4j.Logger;
  12
  13 import eu.etaxonomy.cdm.app.common.CdmDestinations;
  14 import eu.etaxonomy.cdm.database.ICdmDataSource;
  15 import eu.etaxonomy.cdm.io.common.CdmDefaultExport;
  16 import eu.etaxonomy.cdm.io.common.DbExportConfiguratorBase.IdType;
  17 import eu.etaxonomy.cdm.io.common.IExportConfigurator.CHECK;
  18 import eu.etaxonomy.cdm.io.common.IExportConfigurator.DO_REFERENCES;
  19 import eu.etaxonomy.cdm.io.common.Source;
  20 import eu.etaxonomy.cdm.io.pesi.out.PesiExportConfigurator;
  21 import eu.etaxonomy.cdm.io.pesi.out.PesiTransformer;
  22
  23 /**
  24  * @author a.mueller
  25  * @author e.-m.lee
  26  * @since 16.02.2010
  27  *
  28  */
  29 public class PesiExportActivatorFE {
  30         @SuppressWarnings("unused")
  31         private static final Logger logger = Logger.getLogger(PesiExportActivatorFE.class);
  32
  33         //database validation status (create, update, validate ...)
  34         static final Source pesiDestination = PesiDestinations.pesi_test_local_CDM_FE2PESI();
  35 //      static final Source pesiDestination = PesiDestinations.pesi_test_local_CDM_ERMS2PESI();
  36
  37         static final ICdmDataSource cdmSource = CdmDestinations.cdm_test_local_faunaEu_mysql();
  38 //      static final ICdmDataSource cdmSource = CdmDestinations.cdm_test_local_mysql();
  39
  40         //Taxon names can't be mapped to their CDM ids as PESI Taxon table mainly holds taxa and there IDs. We ad nameIdStart to the TaxonName id to get a unique id
  41         static final int nameIdStart = 10000000;
  42
  43         static final int partitionSize = 2000;
  44
  45         //check - export
  46         static final CHECK check = CHECK.EXPORT_WITHOUT_CHECK;
  47
  48         static final boolean deleteAll = true;
  49
  50         static final IdType idType = IdType.CDM_ID_WITH_EXCEPTIONS;
  51
  52 // ****************** ALL *****************************************
  53
  54         //references
  55         static final DO_REFERENCES doReferences =  DO_REFERENCES.ALL;
  56
  57         //taxa
  58         static final boolean doTaxa = true;
  59         static final boolean doRelTaxa = true;
  60         static final boolean doNotes = true;
  61         static final boolean doNoteSources = true;
  62         static final boolean doAdditionalTaxonSource = true;
  63         static final boolean doOccurrence = true;
  64         static final boolean doOccurrenceSource = true;
  65         static final boolean doImage = true;
  66         static final boolean doTreeIndex = true;
  67         static final boolean doRank = true;
  68         static final boolean doInferredSynonyms = true;
  69         static final boolean doPureNames = false; // !!!
  70         static final boolean doDescription = true;
  71
  72
  73 // ************************ NONE **************************************** //
  74
  75 //      //references
  76 //      static final DO_REFERENCES doReferences =  DO_REFERENCES.NONE;
  77 //
  78 //      //taxa
  79 //      static final boolean doTaxa = false;
  80 //      static final boolean doRelTaxa = false;
  81 //      static final boolean doNotes = false;
  82 //      static final boolean doNoteSources = false;
  83 //      static final boolean doAdditionalTaxonSource = false;
  84 //      static final boolean doOccurrence = false;
  85 //      static final boolean doOccurrenceSource = false;
  86 //      static final boolean doImage = false;
  87 //      static final boolean doTreeIndex = true;
  88 //      static final boolean doRank = true;
  89 //      static final boolean doInferredSynonyms = true;
  90 //      static final boolean doDescription = false;
  91
  92
  93         public boolean  doExport(ICdmDataSource source){
  94                 System.out.println("Start export to PESI ("+ pesiDestination.getDatabase() + ") ...");
  95
  96                 //make PESI Source
  97                 Source destination = pesiDestination;
  98                 PesiTransformer transformer = new PesiTransformer(destination);
  99
 100                 PesiExportConfigurator config = PesiExportConfigurator.NewInstance(destination, source, transformer);
 101
 102                 config.setDoTaxa(doTaxa);
 103                 config.setDoRelTaxa(doRelTaxa);
 104                 config.setDoOccurrence(doOccurrence);
 105                 config.setDoReferences(doReferences);
 106                 config.setDoImages(doImage);
 107                 config.setDoNotes(doNotes);
 108                 config.setDoNoteSources(doNoteSources);
 109                 config.setDoOccurrenceSource(doOccurrenceSource);
 110                 config.setDoTreeIndex(doTreeIndex);
 111                 config.setDoInferredSynonyms(doInferredSynonyms);
 112                 config.setDoPureNames(doPureNames);
 113                 config.setDoDescription(doDescription);
 114
 115                 config.setCheck(check);
 116                 config.setLimitSave(partitionSize);
 117                 config.setIdType(idType);
 118                 config.setNameIdStart(nameIdStart);
 119                 if (deleteAll){
 120                         destination.update("EXEC sp_deleteAllData");
 121                 }
 122
 123
 124                 // invoke export
 125                 CdmDefaultExport<PesiExportConfigurator> pesiExport = new CdmDefaultExport<PesiExportConfigurator>();
 126
 127                 boolean result = pesiExport.invoke(config).isSuccess();
 128
 129                 System.out.println("End export to PESI ("+ destination.getDatabase() + ")..." + (result? "(successful)":"(with errors)"));
 130                 return result;
 131         }
 132
 133         /**
 134          * @param args
 135          */
 136         public static void main(String[] args) {
 137                 PesiExportActivatorFE ex = new PesiExportActivatorFE();
 138                 ICdmDataSource source = CdmDestinations.chooseDestination(args) != null ? CdmDestinations.chooseDestination(args) : cdmSource;
 139
 140                 ex.doExport(source);
 141         }
 142
 143 }