app-import/src/main/java/eu/etaxonomy/cdm/app/references/EndNoteImportActivator.java

   1 package eu.etaxonomy.cdm.app.references;
   2
   3 import java.net.URI;
   4 import java.net.URISyntaxException;
   5
   6 import org.apache.log4j.Logger;
   7
   8 import eu.etaxonomy.cdm.api.application.CdmApplicationController;
   9 import eu.etaxonomy.cdm.app.common.CdmDestinations;
  10 import eu.etaxonomy.cdm.app.util.TestDatabase;
  11 import eu.etaxonomy.cdm.database.DbSchemaValidation;
  12 import eu.etaxonomy.cdm.database.ICdmDataSource;
  13 import eu.etaxonomy.cdm.io.common.CdmDefaultImport;
  14 import eu.etaxonomy.cdm.io.reference.endnote.in.EndnoteImportConfigurator;
  15
  16 public class EndNoteImportActivator {
  17         /* SerializeFrom DB **/
  18         //private static final ICdmDataSource cdmSource = CdmDestinations.localH2Diptera();
  19         private static final ICdmDataSource cdmDestination = CdmDestinations.localH2Diptera();
  20
  21         // Import:
  22         private static String importFileNameString =    "file:/C:/EndNoteTest.xml";
  23
  24
  25
  26
  27         private static final Logger logger = Logger.getLogger(EndNoteImportActivator.class);
  28
  29
  30         public static String chooseFile(String[] args) {
  31                 if(args == null)
  32                         return null;
  33                 for (String dest: args){
  34                         if (dest.endsWith(".xml")){
  35                                 return args[0];
  36                         }
  37                 }
  38                 return null;
  39         }
  40
  41         private void invokeImport(String importFileParamString, ICdmDataSource destination) {
  42                 URI importFileName;
  43                 try {
  44                         importFileName = new URI(importFileNameString);
  45                         EndnoteImportConfigurator endNoteImportConfigurator;
  46                         if (importFileParamString !=null && destination != null){
  47                                 URI importFileParam = new URI(importFileParamString);
  48                                 endNoteImportConfigurator = EndnoteImportConfigurator.NewInstance(importFileParam, destination);
  49                         }else if (destination != null){
  50                                 endNoteImportConfigurator = EndnoteImportConfigurator.NewInstance(importFileName, destination);
  51                         } else if (importFileParamString !=null ){
  52                                 URI importFileParam = new URI(importFileParamString);
  53                                 endNoteImportConfigurator = EndnoteImportConfigurator.NewInstance(importFileParam, cdmDestination);
  54                         } else{
  55                                 endNoteImportConfigurator = EndnoteImportConfigurator.NewInstance(importFileName, cdmDestination);
  56                         }
  57
  58                         CdmDefaultImport<EndnoteImportConfigurator> endNoteImport =
  59                                 new CdmDefaultImport<EndnoteImportConfigurator>();
  60
  61
  62                         // invoke import
  63                         logger.debug("Invoking Jaxb import");
  64
  65                         endNoteImport.invoke(endNoteImportConfigurator, destination, true);
  66                 } catch (URISyntaxException e) {
  67                         e.printStackTrace();
  68                         return;
  69                 }
  70
  71
  72         }
  73
  74
  75         private CdmApplicationController initDb(ICdmDataSource db) {
  76
  77                 // Init source DB
  78                 CdmApplicationController appCtrInit = null;
  79
  80                 appCtrInit = TestDatabase.initDb(db, DbSchemaValidation.VALIDATE, true);
  81
  82                 return appCtrInit;
  83         }
  84
  85
  86         // Load test data to DB
  87         private void loadTestData(CdmApplicationController appCtrInit) {
  88
  89                 TestDatabase.loadTestData("", appCtrInit);
  90         }
  91
  92
  93         /**
  94          * @param args
  95          */
  96         public static void main(String[] args) {
  97
  98                 EndNoteImportActivator sc = new EndNoteImportActivator();
  99                 ICdmDataSource destination = CdmDestinations.chooseDestination(args) != null ? CdmDestinations.chooseDestination(args) : cdmDestination;
 100                 String file = chooseFile(args)!= null ? chooseFile(args) : importFileNameString;
 101                 CdmApplicationController appCtr = null;
 102                 appCtr = sc.initDb(destination);
 103                 //sc.loadTestData(appCtr);
 104
 105                 sc.invokeImport(file, destination);
 106         }
 107
 108 }