app-import/src/main/java/eu/etaxonomy/cdm/app/references/EndNoteImportActivator.java

   1 package eu.etaxonomy.cdm.app.references;
   2
   3 import java.net.URI;
   4 import java.net.URISyntaxException;
   5
   6 import org.apache.log4j.Logger;
   7
   8 import eu.etaxonomy.cdm.api.application.CdmApplicationController;
   9 import eu.etaxonomy.cdm.app.common.CdmDestinations;
  10 import eu.etaxonomy.cdm.app.util.TestDatabase;
  11 import eu.etaxonomy.cdm.database.DbSchemaValidation;
  12 import eu.etaxonomy.cdm.database.ICdmDataSource;
  13 import eu.etaxonomy.cdm.io.common.CdmDefaultImport;
  14 import eu.etaxonomy.cdm.io.reference.endnote.in.EndnoteImportConfigurator;
  15
  16 public class EndNoteImportActivator {
  17         /* SerializeFrom DB **/
  18         private static final ICdmDataSource cdmDestination = CdmDestinations.localH2();
  19
  20         // Import:
  21         private static String importFileNameString =    "file:/C:/EndNoteTest.xml";
  22
  23
  24
  25
  26         private static final Logger logger = Logger.getLogger(EndNoteImportActivator.class);
  27
  28
  29         public static String chooseFile(String[] args) {
  30                 if(args == null)
  31                         return null;
  32                 for (String dest: args){
  33                         if (dest.endsWith(".xml")){
  34                                 return args[0];
  35                         }
  36                 }
  37                 return null;
  38         }
  39
  40         private void invokeImport(String importFileParamString, ICdmDataSource destination) {
  41                 URI importFileName;
  42                 try {
  43                         importFileName = new URI(importFileNameString);
  44                         EndnoteImportConfigurator endNoteImportConfigurator;
  45                         if (importFileParamString !=null && destination != null){
  46                                 URI importFileParam = new URI(importFileParamString);
  47                                 endNoteImportConfigurator = EndnoteImportConfigurator.NewInstance(importFileParam, destination);
  48                         }else if (destination != null){
  49                                 endNoteImportConfigurator = EndnoteImportConfigurator.NewInstance(importFileName, destination);
  50                         } else if (importFileParamString !=null ){
  51                                 URI importFileParam = new URI(importFileParamString);
  52                                 endNoteImportConfigurator = EndnoteImportConfigurator.NewInstance(importFileParam, cdmDestination);
  53                         } else{
  54                                 endNoteImportConfigurator = EndnoteImportConfigurator.NewInstance(importFileName, cdmDestination);
  55                         }
  56
  57                         CdmDefaultImport<EndnoteImportConfigurator> endNoteImport =
  58                                 new CdmDefaultImport<EndnoteImportConfigurator>();
  59
  60
  61                         // invoke import
  62                         logger.debug("Invoking Jaxb import");
  63
  64                         endNoteImport.invoke(endNoteImportConfigurator, destination, true);
  65                 } catch (URISyntaxException e) {
  66                         e.printStackTrace();
  67                         return;
  68                 }
  69
  70
  71         }
  72
  73
  74         private CdmApplicationController initDb(ICdmDataSource db) {
  75
  76                 // Init source DB
  77                 CdmApplicationController appCtrInit = null;
  78
  79                 appCtrInit = TestDatabase.initDb(db, DbSchemaValidation.VALIDATE, true);
  80
  81                 return appCtrInit;
  82         }
  83
  84
  85         // Load test data to DB
  86         private void loadTestData(CdmApplicationController appCtrInit) {
  87
  88                 TestDatabase.loadTestData("", appCtrInit);
  89         }
  90
  91
  92         /**
  93          * @param args
  94          */
  95         public static void main(String[] args) {
  96
  97                 EndNoteImportActivator sc = new EndNoteImportActivator();
  98                 ICdmDataSource destination = CdmDestinations.chooseDestination(args) != null ? CdmDestinations.chooseDestination(args) : cdmDestination;
  99                 String file = chooseFile(args)!= null ? chooseFile(args) : importFileNameString;
 100                 CdmApplicationController appCtr = null;
 101                 appCtr = sc.initDb(destination);
 102                 //sc.loadTestData(appCtr);
 103
 104                 sc.invokeImport(file, destination);
 105         }
 106
 107 }