app-import/src/main/java/eu/etaxonomy/cdm/io/redlist/gefaesspflanzen/RedListGefaesspflanzenTransformer.java

   1 // $Id$
   2 /**
   3 * Copyright (C) 2007 EDIT
   4 * European Distributed Institute of Taxonomy
   5 * http://www.e-taxonomy.eu
   6 *
   7 * The contents of this file are subject to the Mozilla Public License Version 1.1
   8 * See LICENSE.TXT at the top of this package for the full license terms.
   9 */
  10
  11 package eu.etaxonomy.cdm.io.redlist.gefaesspflanzen;
  12
  13 import java.util.UUID;
  14
  15 import org.apache.log4j.Logger;
  16
  17 import eu.etaxonomy.cdm.io.common.mapping.InputTransformerBase;
  18 import eu.etaxonomy.cdm.io.common.mapping.UndefinedTransformerMethodException;
  19 import eu.etaxonomy.cdm.model.name.NomenclaturalStatusType;
  20 import eu.etaxonomy.cdm.model.name.Rank;
  21 import eu.etaxonomy.cdm.model.taxon.TaxonRelationshipType;
  22
  23 /**
  24  *
  25  * @author pplitzner
  26  * @date Mar 1, 2016
  27  *
  28  */
  29 @SuppressWarnings("serial")
  30 public final class RedListGefaesspflanzenTransformer extends InputTransformerBase {
  31
  32     @SuppressWarnings("unused")
  33         private static final Logger logger = Logger.getLogger(RedListGefaesspflanzenTransformer.class);
  34
  35     @Override
  36     public UUID getRankUuid(String key) throws UndefinedTransformerMethodException {
  37         if (key == null){return null;}
  38         if (key.equals("SAM")){return RedListUtil.uuidRankCollectionSpecies;}
  39         return null;
  40     }
  41
  42     @Override
  43     public Rank getRankByKey(String key) throws UndefinedTransformerMethodException {
  44         if (key == null){return null;}
  45         if (key.equals("GAT")){return Rank.GENUS();}
  46         else if (key.equals("SPE")){return Rank.SPECIES();}
  47         else if (key.equals("VAR")){return Rank.VARIETY();}
  48         else if (key.equals("SSP")){return Rank.SUBSPECIES();}
  49         else if (key.equals("FOR")){return Rank.FORM();}
  50         else if (key.equals("RAC")){return Rank.RACE();}
  51         else if (key.equals("SEC")){return Rank.SECTION_BOTANY();}
  52         else if (key.equals("SSE")){return Rank.SUBSECTION_BOTANY();}
  53         else if (key.equals("SGE")){return Rank.SUBGENUS();}
  54         else if (key.equals("SVA")){return Rank.SUBVARIETY();}
  55         else if (key.equals("CV")){return Rank.CULTIVAR();}
  56         else if (key.equals("PRO")){return Rank.PROLES();}
  57         else if (key.equals("SER")){return Rank.SERIES();}
  58         else if (key.equals("GRE")){return Rank.GREX();}
  59         else if (key.equals("AGG")){return Rank.SPECIESAGGREGATE();}
  60         else if (key.equals("SFO")){return Rank.SUBFORM();}
  61         else if (key.equals("FAM")){return Rank.FAMILY();}
  62         else if (key.equals("SLU")){return Rank.SUBLUSUS();}
  63         //FIXME implement ranks
  64 //        else if (key.equals("LUS")){return Rank.LUSUS();}
  65 //        else if (key.equals("SPR")){return Rank.SUBPROLES();}
  66 //        else if (key.equals("SAM")){return Rank.SAMMELART();}
  67 //        else if (key.equals("MOD")){return Rank.MODIFICATIO();}
  68 //        else if (key.equals("KMB")){return Rank.COMBINATION();}
  69 //        else if (key.equals("SPI")){return Rank.SUBSPECIESPRINCIPES();}
  70         else if (key.equals("GRO") || key.equals("GRU")){return Rank.SPECIESGROUP();}
  71         else if (key.equals("?")){return Rank.UNKNOWN_RANK();}
  72         return null;
  73     }
  74
  75     @Override
  76     public NomenclaturalStatusType getNomenclaturalStatusByKey(String key) throws UndefinedTransformerMethodException {
  77         if (key == null){return null;}
  78         key = key.trim();
  79         if (key.equals("nom. cons.")){return NomenclaturalStatusType.CONSERVED();}
  80         else if (key.equals("nom. illeg.")){return NomenclaturalStatusType.ILLEGITIMATE();}
  81         else if (key.equals("nom. inval.")){return NomenclaturalStatusType.INVALID();}
  82         else if (key.equals("nom. inval. (sine typus)")){return NomenclaturalStatusType.INVALID();}
  83         else if (key.equals("nom. inval. (sine descr.)")){return NomenclaturalStatusType.INVALID();}
  84         else if (key.equals("nom. inval. (sine descr. lat.)")){return NomenclaturalStatusType.INVALID();}
  85         else if (key.equals("nom. inval. (sine basion.)")){return NomenclaturalStatusType.INVALID();}
  86         else if (key.equals("nom. inval. (nom. non accept.)")){return NomenclaturalStatusType.INVALID();}
  87         else if (key.equals("nom. ambig.")){return NomenclaturalStatusType.AMBIGUOUS();}
  88         else if (key.equals("nom. nud.")){return NomenclaturalStatusType.NUDUM();}
  89         else if (key.equals("nom. dub.")){return NomenclaturalStatusType.DOUBTFUL();}
  90         else if (key.equals("nom. rejic.")){return NomenclaturalStatusType.REJECTED();}
  91         else if (key.equals("nom. rejic. prop.")){return NomenclaturalStatusType.REJECTED_PROP();}
  92         else if (key.equals("nom. utique rejic.")){return NomenclaturalStatusType.UTIQUE_REJECTED();}
  93         else if (key.equals("nom. utique rejic. pro.")){return NomenclaturalStatusType.UTIQUE_REJECTED_PROP();}
  94         else if (key.equals("nom. utique rejic. prop.")){return NomenclaturalStatusType.UTIQUE_REJECTED_PROP();}
  95         else if (key.equals("comb. nov.")){return NomenclaturalStatusType.COMB_NOV();}
  96         else if (key.equals("nom. illeg. (nom. superfl.)")){return NomenclaturalStatusType.SUPERFLUOUS();}
  97         else if (key.equals("nom. inval. (nom. nud.)")){return NomenclaturalStatusType.NUDUM();}
  98         else if (key.equals("nom. nud.")){return NomenclaturalStatusType.NUDUM();}
  99         else if (key.equals("nom. inval. (op. utique oppr.)")){return NomenclaturalStatusType.OPUS_UTIQUE_OPPR();}
 100         else if (key.equals("nom. inval. (nom. prov.)")){return NomenclaturalStatusType.PROVISIONAL();}
 101         return null;
 102     }
 103
 104     public TaxonRelationshipType getTaxonRelationshipTypeByKey(String key) {
 105         if (key == null){return null;}
 106         else {
 107             if (key.equals("=")){return TaxonRelationshipType.CONGRUENT_TO();}
 108             else if (key.equals(">")){return TaxonRelationshipType.INCLUDES();}
 109             else if (key.equals("<")){return TaxonRelationshipType.INCLUDES();}
 110             else if (key.equals("!")){return TaxonRelationshipType.OVERLAPS();}
 111             else if (key.equals("?")){return TaxonRelationshipType.UNCLEAR();}
 112             else if (key.equals("x")){return TaxonRelationshipType.NOT_YET_WORKED_ON();}
 113         }
 114         return null;
 115     }
 116
 117 }