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Release 5.45
open
Due in 1 day
(03/20/2024)
6%
278 issues
(0 closed —
278 open
)
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Estimated time
24
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hours
Issues by
Tracker
Status
Priority
Author
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Category
bug
0/141
feature request
0/84
task
0/51
discussion
0/2
Related issues
bug #1835
: PALMS. Not clear format for authors and references to be parsed correctly
Actions
bug #2449
: Some or many names have an empty fullTitleCache though information is atomized
Actions
bug #2851
: Check ordering in API paged methods
Actions
bug #3511
: errors are not cleared after reloading the configuration
Actions
bug #4330
: Correct handling of nomenclatural inreferences of Journals
Actions
bug #4598
: Media sections have duplicate code for "advanced media view" label
Actions
bug #4796
: Sorting of hybrids
Actions
bug #4945
: Right click menu for polytomous key node list view needs correct enabling
Actions
bug #6100
: Name parser problems
Actions
bug #6181
: Deleting a misapplied name does not set the dirty flag
Actions
bug #6298
: Add delete button for areas for common names and for person in user
Actions
bug #6499
: Remaining issues to include pages in bibliographic reference titleCaches
Actions
bug #6500
: Remaining issues for volume formating in generic references
Actions
bug #6523
: Correct display of misspellings in synonymy
Actions
bug #6766
: maven profile to build cdm-vaadin for production purposes
Actions
bug #7075
: Excel import for images
Actions
bug #7176
: published=false for Taxon where the according TaxonName is associated with an unpublished Registration
Actions
bug #7183
: Creating a new reference in bulk editor the focus is not set to the newly created entity
Actions
bug #7634
: Timeout/Performance problems in Taxeditor
Actions
bug #7943
: TypeDesignationsEditor Select Reference for figure
Actions
bug #8035
: Vaadin Collector team layout
Actions
bug #8105
: better hotfix branch strategy in git flow to avoid commits in master which are missing in develop
Actions
bug #8205
: SpecimenTypeDesignationsEditor: First selection of mediaReference gets lost
Actions
bug #8233
: [Follow up] Creating type duplicates
Actions
bug #8243
: Cdm Cache uses a lot of disk space
Actions
bug #8254
: Add term information to state dropdown in CharacterMatrix
Actions
bug #8270
: TermDTOs with an orderIndex are ordered in unordered term vocabularies
Actions
bug #8338
: Newly created structural modifier terms are not available in details view
Actions
bug #8367
: Advanced media view is not available for media not edited in media details view
Actions
bug #8371
: When creating a new term for a vocabulary the term should have the focus afterwards
Actions
bug #8417
: LazyInitializationException in TermDTO for media
Actions
bug #8431
: missing status bar for cdm light export
Actions
bug #8493
: hide taxon page general tab TOC block if empty
Actions
bug #8510
: Non unique object exception when creating FeatureStates
Actions
bug #8681
: Fix sect. parsing
Actions
bug #8687
: Description page must show all DescriptionElement subclasses
Actions
bug #8691
: Remaining issues for asynchronous image loading
Actions
bug #8878
: Author selection dialog does not work on abbrev author title
Actions
bug #8880
: No classification parameter selected for DwC-A export
Actions
bug #8916
: ConcurrentModificationException in CdmFormFactory.destroyElement()
Actions
bug #8932
: Swagger does not distinguish overloaded controller endpoints
Actions
bug #8935
: Specimen Table: improved and more complete details row for character data
Actions
bug #8976
: error in tagged_text_extract_reference_and_detail()
Actions
bug #9028
: Endless loop when opening the context menu of name facts
Actions
bug #9051
: Role Project manager should not have right to edit users and creating a new user with missing rights results in two message-boxes
Actions
bug #9133
: cdm_taxontree active taxon is focused after page reload
Actions
bug #9212
: swagger-ui invalid try out URLs under HTTPS
Actions
bug #9217
: swagger-ui slow in Cromium and freezes Firefox
Actions
bug #9302
: Phycobank related issues for TypeDesignation formatting
Actions
bug #9303
: [DISCUSS+IMPLEMENT] Make type designation micro references for non-lectotypes editable in TaxEditor
Actions
bug #9367
: E+M shapefile Baltic subarea borders always visible and remove Georgian subdivisions
Actions
bug #9390
: Remaining issues for set secundum dialog
Actions
bug #9393
: NPE when removing parent from TaxonNode editor
Actions
bug #9423
: Improve language handling for TermType.getMessage() and others
Actions
bug #9424
: CdmImageInfo connection timeout implemented
Actions
bug #9425
: Common Names handling in CdmLight
Actions
bug #9435
: Error when deleting without saving
Actions
bug #9438
: User without rights on publish flag can update publish flag of synonyms and subtree operations
Actions
bug #9440
: Invalid designation sign missing for some invalid designations in data portal
Actions
bug #9450
: Save reverts previous changes in NameEditor
Actions
bug #9463
: UniversalViewer causes jQuery version conflict and breaks maps
Actions
bug #9489
: Fix header of character matrix for hierarchical characters
Actions
bug #9510
: Improve label for descriptions created via DDS matrix
Actions
bug #9516
: Check publish flag of all homotypic synonyms when moving
Actions
bug #9522
: Workflow for reuse name
Actions
bug #9532
: Check whether all data are loaded for NameEditor
Actions
bug #9534
: Filtering of reference type does not work correctly
Actions
bug #9581
: Strange focus behavior in taxon navigator after right mouse click
Actions
bug #9585
: Specimen page: Typedesignation "Syntype" misses name
Actions
bug #9600
: Delete of taxon with unselected name delete returns warning
Actions
bug #9609
: Use DerivedUnit or FieldUnit for DetailsView of tree editor
Actions
bug #9615
: Options for schema creation in empty data bases.
Actions
bug #9620
: Add a preference which defines whether a new uuid is wanted for swap synoym and accepted
Actions
bug #9621
: New Preference for Default of the SecundumForSubtreeConfigurator
Actions
bug #9627
: Handle updated objects correctly in monitored operations in taxeditor
Actions
bug #9631
: New implementation for disable details/supplemental data views
Actions
bug #9633
: startup option to create an initial classfication
Actions
bug #9656
: Closing the referencing objects view should cancel the current request
Actions
bug #9662
: CDMLight: Output should summarize all MAN with same name and err. sec
Actions
bug #9668
: Secundum reference is switched when swap synonym and accepted taxon
Actions
bug #9676
: Separators in nomenclatural act representations between identifier and date
Actions
bug #9686
: nomenclatural status missing in
Actions
bug #9709
: remove undesired dots from synonymy entries
Actions
bug #9732
: Open issues in specimen tree editor
Actions
bug #9741
: cdm_dataportal_shortname_of truncates uninomial with not abbreviated author strings and causes other odds
Actions
bug #9742
: embedded h2 database in server mode for connection pooling
Actions
bug #9743
: Universal Viewer - metadata component gets lost on leaving fullscreen mode
Actions
bug #9750
: [CdmLight] Export all name identifier
Actions
bug #9775
: Open issues for web app media in the image gallery
Actions
bug #9777
: TypeError: Argument 1 passed to cdm_tagged_text_add_options() in registration-search
Actions
bug #9779
: Exception when override db preference
Actions
bug #9781
: Merge of QuantitativeData or CategoricalData from Character Matrix should not create new records
Actions
bug #9783
: When a new value is added to a quantitative data it should appear at the end
Actions
bug #9789
: Missing configurator when deleting a classification
Actions
bug #9791
: Handle differing media meta data and informations in DB
Actions
bug #9800
: Open issues for character matrix
Actions
bug #9802
: Label for min=max does not unify values in Matrix QuantitativeData label provider
Actions
bug #9813
: Details view should be available for literature (and default) descriptions in character matrix
Actions
bug #9823
: [Distribution Editor] Unsaved changes not shown in correct column when changing areas
Actions
bug #9828
: Preferred stable URI (and maybe other data) are not shown in specimen table if no field unit exists
Actions
bug #9844
: Add preference for disabling cloned descriptions
Actions
bug #9846
: Improve delete configuration in specimen list editor
Actions
bug #9847
: Specimen table view citation must not include collection information
Actions
bug #9850
: Discussion and implementation how to expand the tree
Actions
bug #9851
: Problems during search for updates when network delay is too big
Actions
bug #9861
: Provide possibility to set a field as inapplicable
Actions
bug #9872
: Selecting cancel in "many records selected" dialogue for specimen tree editor has not effect.
Actions
bug #9883
: Swagger-UI respects https
Actions
bug #9891
: Open issues for RIS import in TaxEditor
Actions
bug #9912
: java.lang.ClassCastException: [Ljava.lang.String; cannot be cast to java.lang.String in TaxonGraphBeforeTransactionCompleteProcess L229
Actions
bug #9945
: Login View: Registration tab registration button active once valid email address has been typed
Actions
bug #9947
: Make DescriptionElementController inherit from base controller and remove doGetDescriptionElementAnnotations
Actions
bug #9978
: Change of CacheStrategy from DerivedUnitFacade to DerivedUnitDefaultCacheStrategy results in different caches for MediaSpecimen
Actions
bug #9983
: Order sources by source type
Actions
bug #9985
: Problems in cdmLight export which are caught and not critical should be warnings only
Actions
bug #10002
: Root taxa should not be abbreviated in taxon tree in dataportal
Actions
bug #10014
: Fix windows build for CDM Server after debian11 upgrade
Actions
bug #10045
: Open issues when updating portal translations
Actions
bug #10060
: Exception when adding kind-of-unit information to a field unit
Actions
bug #10101
: Correct mapping and handling of sorted tree structures
Actions
bug #10105
: Fix logging in TaxEditor after migration to log4j 2
Actions
bug #10129
: Allow to create MediaSpecimen when creating specimen for a type designation
Actions
bug #10134
: Changing from Synonym to MAN needs save, the other way round, save is not necessary
Actions
bug #10143
: After changing from a dynamic reference to another referenceType the accessed field is not removed
Actions
bug #10147
: Context menu for columns does not work in distribution editor
Actions
bug #10155
: Preference for default language of shown representations
Actions
bug #10158
: Remove "Description Element" from view labels
Actions
bug #10162
: Problems when deleting names involved in a namerelationship
Actions
bug #10197
: Show empty page for delay while updating
Actions
bug #10230
: Nomenclatural reference selection dialogue should behave like the other reference selection dialogues
Actions
bug #10251
: Feature tree label is empty representation after adding a new term
Actions
bug #10252
: Session handling in name bulk editor not correct
Actions
bug #10259
: Terms of the default vocabularies should not be moved or deleted
Actions
bug #10264
: Update details view and referencing objects view after deduplication
Actions
bug #10265
: Change color for person fields "Abbrev title" and "Collector title" if not set
Actions
bug #10266
: Linking navigator with taxon slows down TaxEditor
Actions
bug #10267
: After deleting a record in bulk editor re-search is not not done correctly
Actions
bug #10309
: Password recovery should be available also for other instances
Actions
bug #10316
: Improve TermDto creation
Actions
bug #10344
: Change listener order for menu and view creation
Actions
bug #10345
: Avoid unnecessary webservice calls in TaxEditor facts view (and others)
Actions
feature request #3630
: Taxeditor should add mimetype of mediaRepresentations automatically
Actions
feature request #3709
: [E+M][Editor] sufficient rights management for E+M workflow
Actions
feature request #4403
: Handle meta data loading/validating of Media in separate thread
Actions
feature request #4867
: Add menu item for subtree cloning
Actions
feature request #5671
: Name selection should not allow self referencing name relationships
Actions
feature request #6554
: The details views are newly created with every change of the focus
Actions
feature request #6774
: Implement OWL export
Actions
feature request #6929
: handling of misapplied names without accepted name
Actions
feature request #7040
: [MASTER] Improve UI performance
Actions
feature request #7178
: implement collectorTitleCache in TeamOrPersonField (vaadin)
Actions
feature request #7416
: OriginalSourceBase.links should be shown in DataPortal
Actions
feature request #7580
: User wishes: CharacterMatrix
Actions
feature request #7860
: [Master] Remaining E+M editor issues
Actions
feature request #7861
: TaxonGraphHibernateListener: inject the ITaxonGraphDao into TaxonGraphBeforeTransactionCompleteProcess
Actions
feature request #8122
: Implement selection of modifier vocabulary for structures and properties
Actions
feature request #8182
: show blast search result
Actions
feature request #8195
: TaxonNamePopupEditor: offer Reference and RuleConsidered fields for replaced synonyms
Actions
feature request #8207
: RegistrationUI: helps avoid name duplicates
Actions
feature request #8248
: Implement OWL import
Actions
feature request #8309
: Implement preferences with predicate and subject in local preferences
Actions
feature request #8325
: Create CDM Instance with all CDM core terms
Actions
feature request #8339
: Completely remove the potentially redundant 'acceptedFor' parameter from synonym page
Actions
feature request #8450
: Character matrix UX
Actions
feature request #8529
: [DISCUSS]Display of aggregated descriptions
Actions
feature request #8700
: Geofilter for DescriptiveDataSets should be used for taxon nodes AND specimens
Actions
feature request #8742
: Allow deleting vocabularies
Actions
feature request #8769
: Biocase import configuration should be shown when clicking on import button
Actions
feature request #8775
: Improve (rapid) data entry into characater matrix for categorical data
Actions
feature request #8777
: Make visiblity of CDM Source configurable
Actions
feature request #8902
: Add "open in" menu to row menu in matrix editor
Actions
feature request #8947
: support multiple values of statistical value type ExactValue
Actions
feature request #8960
: Use explicit icon for accepted taxa being basionyms
Actions
feature request #8967
: Improve label for cloned descriptions
Actions
feature request #8980
: Type specimen editor, collection data field misused by users
Actions
feature request #8983
: authors and team in combobox better distinguishable
Actions
feature request #9054
: Allow adding taxon descriptions to matrix for taxa which have no specimen descriptions attached yet
Actions
feature request #9079
: Move supported and available for parts of feature detail element to sections
Actions
feature request #9090
: Implement external links for identifiable entities in TaxEditor
Actions
feature request #9117
: show textual type information in registration page
Actions
feature request #9122
: update shapefile mappings of TDWG areas to the merged shapefile tdwg_levels_1-4
Actions
feature request #9190
: Make taxeditor.local a loadable plugin not installed by default
Actions
feature request #9370
: Search in media bulk editor should include search on URI
Actions
feature request #9380
: It is not possible to show MediaRepresentation(Part) supplemental data
Actions
feature request #9381
: Refresh button for character matrix
Actions
feature request #9399
: DB preference to make all Specimen functionality/menu items invisible
Actions
feature request #9418
: Improve entering of date published
Actions
feature request #9437
: Show user friendly text for permission denied exception
Actions
feature request #9473
: Support moving images to new taxa similar to facts
Actions
feature request #9487
: Split state (and/or other big) vocabularies
Actions
feature request #9511
: Move specimens/individual associations for matrix into same description
Actions
feature request #9514
: Open issues for taxon navigator refresh
Actions
feature request #9517
: Descriptions with status "IndividualsAssociation" should only support adding of features supporting IndividualAssociations
Actions
feature request #9519
: Add posibilty to add IndividualAssociation descriptions in Facts View
Actions
feature request #9523
: Check secundum of homotypic synonyms when changing accepted taxon to synonym
Actions
feature request #9540
: Handle classification source as source in TaxEditor
Actions
feature request #9547
: Show warning in TaxEditor if a MediaRepresentation can not be shown in a Viewer
Actions
feature request #9548
: Handle links to websites, webapps or similar in image galleries (simple and UV)
Actions
feature request #9592
: SpecimenOrObservationBaseDTO: field for hidden derivatives
Actions
feature request #9616
: Reference for condensed distribution string
Actions
feature request #9622
: Improve remoting progress monitor handling
Actions
feature request #9652
: instances status report web service
Actions
feature request #9677
: Implement recombine operation
Actions
feature request #9696
: Implement taxon concept additional parameter for Taxon details view
Actions
feature request #9698
: Make name relationship filter a DB preference
Actions
feature request #9712
: Handling non image media in IIIF manifests
Actions
feature request #9716
: editing of image source external links possible in details editor
Actions
feature request #9717
: show media source external links in media gallery and media page
Actions
feature request #9718
: add media source external links to IIIF item meta data
Actions
feature request #9787
: option to show external kml layers in the taxon/specimen page
Actions
feature request #9829
: Secure writing methods for CdmPreferences with role Role_Project_Manager
Actions
feature request #9839
: Show distanceToGround on the occurrence page
Actions
feature request #9841
: Possibility to open only a taxonomic subtree of a matrix
Actions
feature request #9879
: Short title for field and derived units
Actions
feature request #9897
: adapt dataportal methods for transparent usage of Anntoation and AnnotationDTO
Actions
feature request #9927
: option to use fixed bbox also for occurrence maps
Actions
feature request #10062
: Migrate TaxEditor word documentation to markdown
Actions
feature request #10086
: Taxonomic and geographic search for data portal
Actions
feature request #10238
: Show accepted name for name type designations with types being synonyms
Actions
feature request #10254
: Implement preference page for occurrence features
Actions
feature request #10255
: Add additional option for sec reference handling
Actions
feature request #10282
: Automatically add unique measurement unit in details view
Actions
feature request #10325
: Improve (large) termtree editing
Actions
feature request #10350
: Implement distribution algorithms to work with Tu, Tu(E) and Tu(A) in Euro+Med
Actions
feature request #10376
: Make uuids searchable in specimen tree editor
Actions
task #2035
: [MANUAL] Update Editor documentation to current version
Actions
task #2250
: TODO use AbstractPagerImpl.hasResultsInRange() where possible
Actions
task #2859
: TaxonNameBase.getReferenceYear does not return inRef year
Actions
task #3408
: replace spring-modules-cache by up to date implementation
Actions
task #3749
: Check if all molecular data is shown correctly in data portal [also DISCUSS]
Actions
task #4338
: [MASTER] Handle abbreviated title and protected cache correctly in TaxEditor
Actions
task #4846
: update the integration portals to use the zen_basetheme
Actions
task #6137
: Urgent imports
Actions
task #6981
: Migrate to Java 11
Actions
task #7356
: setup selenium test suite for cdm-vaadin
Actions
task #8091
: Discuss Referencetype PrintSeries with respect to user needs of PhycoBank and taxonomic projects
Actions
task #8391
: Name page shows complete name information (II)
Actions
task #8419
: Harmonization of the different specimen representations
Actions
task #8841
: clean up application context configuration
Actions
task #8952
: Change data set to dataset
Actions
task #9014
: Unparsable name strings
Actions
task #9132
: Update cyprus images to Scaler default API and add thumbnails
Actions
task #9201
: Titelcache creation for nested collections - DISCUSS
Actions
task #9203
: Filter out generated MediaRepresentations if a part with exactly the same URL already exists.
Actions
task #9219
: Revert: requests with %2F in URL are rejected by apache
Actions
task #9228
: Adaptations to allow editing Centaurea in Flora of Greece
Actions
task #9231
: Create statistics for Euro+Med
Actions
task #9275
: Cleanup apache configuration from "AllowEncodedSlashes On"
Actions
task #9323
: discuss display of ExternalLink.description
Actions
task #9400
: Check whether it is possible to set rights to reduce the work to descriptive datasets
Actions
task #9431
: OccurrenceServiceImpl._findRootUnitDTO(..)
Actions
task #9448
: Remove all not e4 classes and rename "Remoting..." classes
Actions
task #9569
: Delete taxon and delete name should use the same UI and same semantics for deleting names
Actions
task #9582
: provide runnable dataportal installation bundled with composer
Actions
task #9599
: remove usage of 'reference/{uuid}/nomenclaturalCitation' in portal
Actions
task #9637
: overcome mixed use of pageNumber and pageIndex
Actions
task #9650
: Update all titleCaches after upgrade of cache strategies and formatters
Actions
task #9653
: update system table with new installation profile name and location
Actions
task #9658
: Cleanup authors with protected names and authors
Actions
task #9711
: Further improve matrix performance
Actions
task #9837
: updadte vaadin to latets 7.* version
Actions
task #9852
: Use rulebased creation of thumbnail links for Salvador images
Actions
task #9886
: Create cdmlib modul cdmlib-api
Actions
task #9922
: Do not save Image Server thumbnails indicating an not-existing image
Actions
task #9944
: Move further methods from DescriptionService to DescriptionElementService
Actions
task #9968
: Add test/monit for testing if utis is running
Actions
task #9969
: Get utis jmeter test running or switch off test
Actions
task #10046
: Upgrade TaxEditor to java 11
Actions
task #10052
: Check if JReleaser could be helpful
Actions
task #10055
: Updates, upgrades and cleanup 2023
Actions
task #10094
: Reenabel anttask for 001-cdm.h2.sql creation
Actions
task #10104
: Cleanup after hibernate v5.4.33 migration
Actions
task #10124
: Adapt deprecated hibernate methods to suggested new methods
Actions
task #10125
: Upgrade jena dependency
Actions
task #10208
: only use cacher for static terms
Actions
task #10438
: Check if reported Win10 performance issue for eclipse is relevant for TaxEditor
Actions
discussion #6678
: [DISCUSS] How to correctly show name relationship "orth. var." in dataportal
Actions
discussion #10013
: Check TAXIC methods for relevance
Actions
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