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Release 5.37

open

48 days late (12/18/2022)

6%

266 issues   (0 closed — 266 open)

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Estimated time 24:00 hours
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bug

0/135
feature request

0/79
task

0/50
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0/2
Related issues
bug #1835: PALMS. Not clear format for authors and references to be parsed correctly Actions
bug #2449: Some or many names have an empty fullTitleCache though information is atomized Actions
bug #2851: Check ordering in API paged methods Actions
bug #3511: errors are not cleared after reloading the configuration Actions
bug #4330: Correct handling of nomenclatural inreferences of Journals Actions
bug #4598: Media sections have duplicate code for "advanced media view" label Actions
bug #4796: Sorting of hybrids Actions
bug #4879: concept relationship annotations not shown in the portal Actions
bug #4945: Right click menu for polytomous key node list view needs correct enabling Actions
bug #6100: Name parser problems Actions
bug #6181: Deleting a misapplied name does not set the dirty flag Actions
bug #6298: Add delete button for areas for common names and for person in user Actions
bug #6499: Remaining issues to include pages in bibliographic reference titleCaches Actions
bug #6500: Remaining issues for volume formating in generic references Actions
bug #6523: Correct display of misspellings in synonymy Actions
bug #6766: maven profile to build cdm-vaadin for production purposes Actions
bug #7075: Excel import for images Actions
bug #7176: published=false for Taxon where the according TaxonName is associated with an unpublished Registration Actions
bug #7183: Creating a new reference in bulk editor the focus is not set to the newly created entity Actions
bug #7781: original spelling is missing for accepted taxon in taxon page Actions
bug #7943: TypeDesignationsEditor Select Reference for figure Actions
bug #7988: Correct formatting and parsing of Reference.editor Actions
bug #8035: Vaadin Collector team layout Actions
bug #8105: better hotfix branch strategy in git flow to avoid commits in master which are missing in develop Actions
bug #8202: Multiple representations exception when reusing image in image gallery Actions
bug #8205: SpecimenTypeDesignationsEditor: First selection of mediaReference gets lost Actions
bug #8233: [Follow up] Creating type duplicates Actions
bug #8243: Cdm Cache uses a lot of disk space Actions
bug #8254: Add term information to state dropdown in CharacterMatrix Actions
bug #8270: TermDTOs with an orderIndex are ordered in unordered term vocabularies Actions
bug #8338: Newly created structural modifier terms are not available in details view Actions
bug #8367: Advanced media view is not available for media not edited in media details view Actions
bug #8371: When creating a new term for a vocabulary the term should have the focus afterwards Actions
bug #8417: LazyInitializationException in TermDTO for media Actions
bug #8431: missing status bar for cdm light export Actions
bug #8493: hide taxon page general tab TOC block if empty Actions
bug #8510: Non unique object exception when creating FeatureStates Actions
bug #8681: Fix sect. parsing Actions
bug #8687: Description page must show all DescriptionElement subclasses Actions
bug #8691: Remaining issues for asynchronous image loading Actions
bug #8878: Author selection dialog does not work on abbrev author title Actions
bug #8880: No classification parameter selected for DwC-A export Actions
bug #8916: ConcurrentModificationException in CdmFormFactory.destroyElement() Actions
bug #8932: Swagger does not distinguish overloaded controller endpoints Actions
bug #8935: Specimen Table: improved and more complete details row for character data Actions
bug #8976: error in tagged_text_extract_reference_and_detail() Actions
bug #9028: Endless loop when opening the context menu of name facts Actions
bug #9051: Role Project manager should not have right to edit users and creating a new user with missing rights results in two message-boxes Actions
bug #9133: cdm_taxontree active taxon is focused after page reload Actions
bug #9212: swagger-ui invalid try out URLs under HTTPS Actions
bug #9217: swagger-ui slow in Cromium and freezes Firefox Actions
bug #9302: Phycobank related issues for TypeDesignation formatting Actions
bug #9303: [DISCUSS+IMPLEMENT] Make type designation micro references for non-lectotypes editable in TaxEditor Actions
bug #9367: E+M shapefile Baltikum subarea borders always visible Actions
bug #9390: Remaining issues for set secundum dialog Actions
bug #9393: NPE when removing parent from TaxonNode editor Actions
bug #9423: Improve language handling for TermType.getMessage() and others Actions
bug #9424: CdmImageInfo connection timeout implemented Actions
bug #9425: Common Names handling in CdmLight Actions
bug #9435: Error when deleting without saving Actions
bug #9438: User without rights on publish flag can update publish flag of synonyms and subtree operations Actions
bug #9440: Invalid designation sign missing for some invalid designations in data portal Actions
bug #9450: Save reverts previous changes in NameEditor Actions
bug #9463: UniversalViewer causes jQuery version conflict and breaks maps Actions
bug #9489: Fix header of character matrix for hierarchical characters Actions
bug #9510: Improve label for descriptions created via DDS matrix Actions
bug #9516: Check publish flag of all homotypic synonyms when moving Actions
bug #9522: Workflow for reuse name Actions
bug #9532: Check whether all data are loaded for NameEditor Actions
bug #9534: Filtering of reference type does not work correctly Actions
bug #9581: Strange focus behavior in taxon navigator after right mouse click Actions
bug #9585: Specimen page: Typedesignation "Syntype" misses name Actions
bug #9600: Delete of taxon with unselected name delete returns warning Actions
bug #9609: Use DerivedUnit or FieldUnit for DetailsView of tree editor Actions
bug #9615: Options for schema creation in empty data bases. Actions
bug #9620: Add a preference which defines whether a new uuid is wanted for swap synoym and accepted Actions
bug #9621: New Preference for Default of the SecundumForSubtreeConfigurator Actions
bug #9627: Handle updated objects correctly in monitored operations in taxeditor Actions
bug #9631: New implementation for disable details/supplemental data views Actions
bug #9633: startup option to create an initial classfication Actions
bug #9656: Closing the referencing objects view should cancel the current request Actions
bug #9662: CDMLight: Output should summarize all MAN with same name and err. sec Actions
bug #9668: Secundum reference is switched when swap synonym and accepted taxon Actions
bug #9676: Separators in nomenclatural act representations between identifier and date Actions
bug #9686: nomenclatural status missing in Actions
bug #9709: remove undesired dots from synonymy entries Actions
bug #9732: Open issues in specimen tree editor Actions
bug #9741: cdm_dataportal_shortname_of truncates uninomial with not abbreviated author strings and causes other odds Actions
bug #9742: embedded h2 database in server mode for connection pooling Actions
bug #9743: Universal Viewer - metadata component gets lost on leaving fullscreen mode Actions
bug #9750: [CdmLight] Export all name identifier Actions
bug #9766: CDM vocabularies should not be editable Actions
bug #9775: Open issues for web app media in the image gallery Actions
bug #9777: TypeError: Argument 1 passed to cdm_tagged_text_add_options() in registration-search Actions
bug #9779: Exception when override db preference Actions
bug #9781: Merge of QuantitativeData or CategoricalData from Character Matrix should not create new records Actions
bug #9783: When a new value is added to a quantitative data it should appear at the end Actions
bug #9789: Missing configurator when deleting a classification Actions
bug #9791: Handle differing media meta data and informations in DB Actions
bug #9800: Open issues for character matrix Actions
bug #9802: Label for min=max does not unify values in Matrix QuantitativeData label provider Actions
bug #9813: Details view should be available for literature (and default) descriptions in character matrix Actions
bug #9823: [Distribution Editor] Unsaved changes not shown in correct column when changing areas Actions
bug #9828: Preferred stable URI (and maybe other data) are not shown in specimen table if no field unit exists Actions
bug #9844: Add preference for disabling cloned descriptions Actions
bug #9846: Improve delete configuration in specimen list editor Actions
bug #9847: Specimen table view citation must not include collection information Actions
bug #9850: Discussion and implementation how to expand the tree Actions
bug #9851: Problems during search for updates when network delay is too big Actions
bug #9861: Provide possibility to set a field as inapplicable Actions
bug #9872: Selecting cancel in "many records selected" dialogue for specimen tree editor has not effect. Actions
bug #9883: Swagger-UI respects https Actions
bug #9891: Open issues for RIS import in TaxEditor Actions
bug #9912: java.lang.ClassCastException: [Ljava.lang.String; cannot be cast to java.lang.String in TaxonGraphBeforeTransactionCompleteProcess L229 Actions
bug #9945: Login View: Registration tab registration button active once valid email address has been typed Actions
bug #9947: Make DescriptionElementController inherit from base controller and remove doGetDescriptionElementAnnotations Actions
bug #9978: Change of CacheStrategy from DerivedUnitFacade to DerivedUnitDefaultCacheStrategy results in different caches for MediaSpecimen Actions
bug #9983: Order sources by source type Actions
bug #9985: Problems in cdmLight export which are caught and not critical should be warnings only Actions
bug #10002: Root taxa should not be abbreviated in taxon tree in dataportal Actions
bug #10014: Fix windows build for CDM Server after debian11 upgrade Actions
bug #10045: Open issues when updating portal translations Actions
bug #10060: Exception when adding kind-of-unit information to a field unit Actions
bug #10101: Correct mapping and handling of sorted tree structures Actions
bug #10105: Fix logging in TaxEditor after migration to log4j 2 Actions
bug #10129: Allow to create MediaSpecimen when creating specimen for a type designation Actions
bug #10134: Changing from Synonym to MAN needs save, the other way round, save is not necessary Actions
bug #10143: After changing from a dynamic reference to another referenceType the accessed field is not removed Actions
bug #10147: Context menu for columns does not work in distribution editor Actions
bug #10155: Preference for default language of shown representations Actions
bug #10158: Remove "Description Element" from view labels Actions
bug #10162: Problems when deleting names involved in a namerelationship Actions
bug #10197: Show empty page for delay while updating Actions
bug #10225: MultipleRepresentationException when moving synonym in homotypic group Actions
bug #10230: Nomenclatural reference selection dialogue should behave like the other reference selection dialogues Actions
feature request #3630: Taxeditor should add mimetype of mediaRepresentations automatically Actions
feature request #3709: [E+M][Editor] sufficient rights management for E+M workflow Actions
feature request #4867: Add menu item for subtree cloning Actions
feature request #5671: Name selection should not allow self referencing name relationships Actions
feature request #6774: Implement OWL export Actions
feature request #6929: handling of misapplied names without accepted name Actions
feature request #7178: implement collectorTitleCache in TeamOrPersonField (vaadin) Actions
feature request #7416: OriginalSourceBase.links should be shown in DataPortal Actions
feature request #7580: User wishes: CharacterMatrix Actions
feature request #7696: use compact type representations in the synonymy as provided by the typedesignations/byTaxon/{taxon_uuid} service Actions
feature request #7860: [Master] Remaining E+M editor issues Actions
feature request #7861: TaxonGraphHibernateListener: inject the ITaxonGraphDao into TaxonGraphBeforeTransactionCompleteProcess Actions
feature request #8122: Implement selection of modifier vocabulary for structures and properties Actions
feature request #8137: Implement sources for type designations in data portal Actions
feature request #8182: show blast search result Actions
feature request #8195: TaxonNamePopupEditor: offer Reference and RuleConsidered fields for replaced synonyms Actions
feature request #8207: RegistrationUI: helps avoid name duplicates Actions
feature request #8248: Implement OWL import Actions
feature request #8309: Implement preferences with predicate and subject in local preferences Actions
feature request #8325: Create CDM Instance with all CDM core terms Actions
feature request #8339: Completely remove the potentially redundant 'acceptedFor' parameter from synonym page Actions
feature request #8450: Character matrix UX Actions
feature request #8529: [DISCUSS]Display of aggregated descriptions Actions
feature request #8700: Geofilter for DescriptiveDataSets should be used for taxon nodes AND specimens Actions
feature request #8742: Allow deleting vocabularies Actions
feature request #8769: Biocase import configuration should be shown when clicking on import button Actions
feature request #8775: Improve (rapid) data entry into characater matrix for categorical data Actions
feature request #8777: Make visiblity of CDM Source configurable Actions
feature request #8902: Add "open in" menu to row menu in matrix editor Actions
feature request #8930: Taxon navigator should show icon if a taxon is unpublished Actions
feature request #8947: support multiple values of statistical value type ExactValue Actions
feature request #8960: Use explicit icon for accepted taxa being basionyms Actions
feature request #8967: Improve label for cloned descriptions Actions
feature request #8980: Type specimen editor, collection data field misused by users Actions
feature request #8983: authors and team in combobox better distinguishable Actions
feature request #9054: Allow adding taxon descriptions to matrix for taxa which have no specimen descriptions attached yet Actions
feature request #9079: Move supported and available for parts of feature detail element to sections Actions
feature request #9090: Implement external links for identifiable entities in TaxEditor Actions
feature request #9117: show textual type information in registration page Actions
feature request #9122: update shapefile mappings of TDWG areas to the merged shapefile tdwg_levels_1-4 Actions
feature request #9190: Make taxeditor.local a loadable plugin not installed by default Actions
feature request #9370: Search in media bulk editor should include search on URI Actions
feature request #9380: It is not possible to show MediaRepresentation(Part) supplemental data Actions
feature request #9381: Refresh button for character matrix Actions
feature request #9399: DB preference to make all Specimen functionality/menu items invisible Actions
feature request #9418: Improve entering of date published Actions
feature request #9437: Show user friendly text for permission denied exception Actions
feature request #9473: Support moving images to new taxa similar to facts Actions
feature request #9487: Split state (and/or other big) vocabularies Actions
feature request #9511: Move specimens/individual associations for matrix into same description Actions
feature request #9514: Open issues for taxon navigator refresh Actions
feature request #9517: Descriptions with status "IndividualsAssociation" should only support adding of features supporting IndividualAssociations Actions
feature request #9519: Add posibilty to add IndividualAssociation descriptions in Facts View Actions
feature request #9523: Check secundum of homotypic synonyms when changing accepted taxon to synonym Actions
feature request #9540: Handle classification source as source in TaxEditor Actions
feature request #9547: Show warning in TaxEditor if a MediaRepresentation can not be shown in a Viewer Actions
feature request #9548: Handle links to websites, webapps or similar in image galleries (simple and UV) Actions
feature request #9592: SpecimenOrObservationBaseDTO: field for hidden derivatives Actions
feature request #9616: Reference for condensed distribution string Actions
feature request #9622: Improve remoting progress monitor handling Actions
feature request #9652: instances status report web service Actions
feature request #9677: Implement recombine operation Actions
feature request #9696: Implement taxon concept additional parameter for Taxon details view Actions
feature request #9698: Make name relationship filter a DB preference Actions
feature request #9712: Handling non image media in IIIF manifests Actions
feature request #9716: editing of image source external links possible in details editor Actions
feature request #9717: show media source external links in media gallery and media page Actions
feature request #9718: add media source external links to IIIF item meta data Actions
feature request #9771: Implement Cdm2Cdm for vocabularies Actions
feature request #9787: option to show external kml layers in the taxon/specimen page Actions
feature request #9829: Secure writing methods for CdmPreferences with role Role_Project_Manager Actions
feature request #9839: Show distanceToGround on the occurrence page Actions
feature request #9840: Add the possibility to enter new server Actions
feature request #9879: Short title for field and derived units Actions
feature request #9897: adapt dataportal methods for transparent usage of Anntoation and AnnotationDTO Actions
feature request #9927: option to use fixed bbox also for occurrence maps Actions
feature request #10062: Migrate TaxEditor word documentation to markdown Actions
feature request #10086: Taxonomic and geographic search for data portal Actions
feature request #10238: Show accepted name for name type designations with types being synonyms Actions
task #2035: [MANUAL] Update Editor documentation to current version Actions
task #2250: TODO use AbstractPagerImpl.hasResultsInRange() where possible Actions
task #2859: TaxonNameBase.getReferenceYear does not return inRef year Actions
task #3408: replace spring-modules-cache by up to date implementation Actions
task #3749: Check if all molecular data is shown correctly in data portal [also DISCUSS] Actions
task #4338: [MASTER] Handle abbreviated title and protected cache correctly in TaxEditor Actions
task #4846: update the integration portals to use the zen_basetheme Actions
task #6137: Urgent imports Actions
task #6981: Migrate to Java 11 Actions
task #7356: setup selenium test suite for cdm-vaadin Actions
task #8091: Discuss Referencetype PrintSeries with respect to user needs of PhycoBank and taxonomic projects Actions
task #8391: Name page shows complete name information (II) Actions
task #8419: Harmonization of the different specimen representations Actions
task #8841: clean up application context configuration Actions
task #8952: Change data set to dataset Actions
task #9014: Unparsable name strings Actions
task #9132: Update cyprus images to Scaler default API and add thumbnails Actions
task #9201: Titelcache creation for nested collections - DISCUSS Actions
task #9203: Filter out generated MediaRepresentations if a part with exactly the same URL already exists. Actions
task #9219: Revert: requests with %2F in URL are rejected by apache Actions
task #9228: Adaptations to allow editing Centaurea in Flora of Greece Actions
task #9231: Create statistics for Euro+Med Actions
task #9275: Cleanup apache configuration from "AllowEncodedSlashes On" Actions
task #9323: discuss display of ExternalLink.description Actions
task #9400: Check whether it is possible to set rights to reduce the work to descriptive datasets Actions
task #9431: OccurrenceServiceImpl._findRootUnitDTO(..) Actions
task #9448: Remove all not e4 classes and rename "Remoting..." classes Actions
task #9524: Use non-model objects in database queries for getDistributionInfoFor Actions
task #9569: Delete taxon and delete name should use the same UI and same semantics for deleting names Actions
task #9582: provide runnable dataportal installation bundled with composer Actions
task #9599: remove usage of 'reference/{uuid}/nomenclaturalCitation' in portal Actions
task #9637: overcome mixed use of pageNumber and pageIndex Actions
task #9650: Update all titleCaches after upgrade of cache strategies and formatters Actions
task #9653: update system table with new installation profile name and location Actions
task #9658: Cleanup authors with protected names and authors Actions
task #9711: Further improve matrix performance Actions
task #9837: updadte vaadin to latets 7.* version Actions
task #9852: Use rulebased creation of thumbnail links for Salvador images Actions
task #9886: Create cdmlib modul cdmlib-api Actions
task #9922: Do not save Image Server thumbnails indicating an not-existing image Actions
task #9944: Move further methods from DescriptionService to DescriptionElementService Actions
task #9968: Add test/monit for testing if utis is running Actions
task #9969: Get utis jmeter test running or switch off test Actions
task #10046: Upgrade TaxEditor to java 11 Actions
task #10052: Check if JReleaser could be helpful Actions
task #10055: Updates, upgrades and cleanup 2023 Actions
task #10094: Reenabel anttask for 001-cdm.h2.sql creation Actions
task #10104: Cleanup after hibernate v5.4.33 migration Actions
task #10124: Adapt deprecated hibernate methods to suggested new methods Actions
task #10125: Upgrade jena dependency Actions
discussion #6678: [DISCUSS] How to correctly show name relationship "orth. var." in dataportal Actions
discussion #10013: Check TAXIC methods for relevance Actions