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Release Notes » History » Version 596

Andreas Kohlbecker, 08/19/2020 11:21 PM

1 121 Andreas Müller
2 149 Andreas Kohlbecker
# Cdm Platform Roadmap
3 148 Andreas Kohlbecker
4
5 203 Andreas Müller
_Please login to see all tickets_
6 10 Andreas Kohlbecker
7 270 Andreas Müller
{{>toc}}
8 314 Andreas Müller
9 590 Andreas Müller
## CDM Platform 5.18 (scheduled for Sep 30th, 2020)
10 1 Andreas Kohlbecker
11 592 Andreas Müller
*Issues: {{ref_issues(-f:fixed_version_id = 295 , -c)}}*
12 590 Andreas Müller
13
 **What will be new?**
14
15
*Downloads:*(not yet available) [TaxEditor](https://dev.e-taxonomy.eu/download/taxeditor/5.18.0/), [CDM Server](https://dev.e-taxonomy.eu/download/cdmserver/5.18.0/), [Data Portal](https://dev.e-taxonomy.eu/download/dataportal/5.18.0/)
16
17
18
19 593 Andreas Müller
## CDM Platform 5.17 (scheduled for Aug 19th, 2020)
20 590 Andreas Müller
21 592 Andreas Müller
*Issues: {{ref_issues(-f:fixed_version_id = 299 , -c)}}*
22 1 Andreas Kohlbecker
23
*Downloads:*(not yet available) [TaxEditor](https://dev.e-taxonomy.eu/download/taxeditor/5.17.0/), [CDM Server](https://dev.e-taxonomy.eu/download/cdmserver/5.17.0/), [Data Portal](https://dev.e-taxonomy.eu/download/dataportal/5.17.0/)
24
25 593 Andreas Müller
**What is new?**
26
27 594 Andreas Müller
* **Data Portal**
28 595 Andreas Müller
 * image viewer
29
       * improved thumbnail handling
30
       * automated creation of thumbnail URLs (avoids that always 2 or 3 versions of the image have to be stored in the database)
31
       * improved image meta data handling
32 594 Andreas Müller
 * possible default copyright statement below image viewer
33
 * improve handling of annotations and other footnotes like sources
34
      * some more annotations and sources are shown now
35 1 Andreas Kohlbecker
 * improved map representation for TDWG area maps
36 595 Andreas Müller
 * occurrence maps hidden if no data exists 
37 594 Andreas Müller
 * fix bug that misapplied name taxa are not shown and not found in search
38
 * fix bug that placemark icons are not clickable in map
39
 * improve test system
40
41 1 Andreas Kohlbecker
* **CDM Library**
42 595 Andreas Müller
 * fix https handling for images 
43 594 Andreas Müller
44
* **Web Services**
45
 * fix bug in taxon service that misapplied name taxa return no result
46
47 1 Andreas Kohlbecker
* **TaxEditor**
48 595 Andreas Müller
 * reduce download size (by >100MB)
49
 * make specimen media editable in specimen assistants and in specimen list editor details view (to improve workflow when editing e.g. type specimen)
50
 * find doubtful taxa without having "?" at beginning of search string
51
 * new layout for taxon node dialogue
52
 * additional parameters editable for taxon node placement source
53
 * move update site to https
54
 * open in browser button for ORCIDS
55
 * bugfixes
56
     * when moving synonym into homotypical group of accepted taxon
57
     * missing synchronization between taxon node dialogue and name editor
58
     * problems with name fact preferences
59
     * exception when editing data in bulk editor
60
 
61 594 Andreas Müller
62 1 Andreas Kohlbecker
* **Vaadin / Registration**
63 595 Andreas Müller
 * TODO
64
65 596 Andreas Kohlbecker
{{ref_issues(-q:Release5.17 , id, subject, status)}}
66 593 Andreas Müller
67 1 Andreas Kohlbecker
## CDM Platform 5.16 (released June 30th, 2020)
68 583 Andreas Müller
69 585 Andreas Müller
*Issues: {{ref_issues(-f:fixed_version_id = 297 , -c)}}*
70 583 Andreas Müller
71 593 Andreas Müller
*Downloads:* [TaxEditor](https://dev.e-taxonomy.eu/download/taxeditor/5.16.0/), [CDM Server](https://dev.e-taxonomy.eu/download/cdmserver/5.16.0/), [Data Portal](https://dev.e-taxonomy.eu/download/dataportal/5.16.0/)
72 583 Andreas Müller
73
**What is new?**
74
75
* **Data Portal**
76
 * Fix for sortorder of taxon nodes in taxon tree
77
 * Fix for incorrect link for geo-coordinates in point maps
78 587 Andreas Kohlbecker
 * Fix for missing information on taxon pages (see #9095)
79 583 Andreas Müller
80
* **CDM Library**
81 589 Andreas Müller
 * Improved deduplication of references and authors during name parsing (the relatively empty parsed references and authors are now merged with richer references and authors, which include e.g. also URI, ISBN, lifespan, first name, etc. information)
82 583 Andreas Müller
 * Improved caching mechanism (which hopefully leads to less multiple representation exceptions in TaxEditor)
83
 * Improved formatting and parsing of dates and periods (now we generally use a format like "30 Jun 2020" which is more language independent)
84
85
* **TaxEditor**
86 584 Andreas Müller
  * Setting focus automatically to newly created facts in Fact View
87
  * Improved reference and author deduplication during creation of new taxa and synonyms
88 588 Andreas Müller
  * Improved handling of malformed URIs
89
  * Fix bug which threw multiple representation exceptions when editing taxa with a taxon node source (which exists very often in some databases)
90 1 Andreas Kohlbecker
  * Fix bug throwing an exception when deleting a classification
91
  * Fix bug throwing an exception when deleting multiple records in bulk editor  
92 596 Andreas Kohlbecker
93
94
{{ref_issues(-q:Release5.16 , id, subject, status)}}
95 583 Andreas Müller
96 558 Andreas Müller
97 568 Andreas Müller
## CDM Platform 5.15 (released June 23rd, 2020)
98 558 Andreas Müller
99 574 Andreas Müller
*Issues: {{ref_issues(-q:Release5.15 , -c)}}*
100 548 Andreas Kohlbecker
101 582 Andreas Müller
*Downloads:* [TaxEditor](https://dev.e-taxonomy.eu/download/taxeditor/5.15.0/), [CDM Server](https://dev.e-taxonomy.eu/download/cdmserver/5.15.0/), [Data Portal](https://dev.e-taxonomy.eu/download/dataportal/5.15.0/)
102 1 Andreas Kohlbecker
103 563 Andreas Müller
**What will be new?**
104
105 565 Andreas Müller
* **Data Model**
106 567 Andreas Müller
 * TaxonNode has a "status" attribute now instead of flags "doubtful", "unplaced" and "excluded"
107
     * Allows to use only max. 1 of the above status for the same node
108
     * "Excluded Notes" changed to => "Status notes" and is valid for what ever status has been chosen
109 566 Andreas Müller
 * Measurement values handled as "BigDecimal" to avoid rounding errors related to floating point algebra and to allow to handle exactness (e.g. 1.6 differs from 1.60) 
110
 * "Available for" attribute for features to distinguish if features are available for taxa, for names and/or for specimen
111
 * Temporal fact datatype for e.g. flowering periods supporting time periods like (Apr-)May-July(-Aug)
112 572 Andreas Müller
 * New feature "Flowering period"
113
 * New feature "Altitude" added
114
 * Rename "later homonym for" to "later homonym of"#
115
 * "Links" added to main classes like taxa, names, references, authors, ... - these allow adding an unlimited number of URL-links to these objects together with a description what this link is for
116
 * Key-Value structure for storing media metadata (not yet used)
117 1 Andreas Kohlbecker
118 572 Andreas Müller
* **Data Portal**
119 579 Andreas Kohlbecker
 * New implementation of the occurrence point display is maps which allows new important features:
120
     * Field unit information can now be shown. 
121
     * Display of error radius
122 580 Andreas Kohlbecker
     * NOTE: More exciting features will come with the following releases.
123 579 Andreas Kohlbecker
 * The new image viewer which has been integrated into the dataportal with version 5.13 is now stable and available for all data portal installations. The new image viewer uses the iiif conform Universalviewer. The new viewer adapts to different screen sizes and supports mobile devices.
124 581 Andreas Müller
 * The beautiful Noto font family is now the default for the data portal and brings improved readability and excellent unicode support.
125
 * The status (unplaced, doubtful, excluded) of a taxon node is now shown on taxon pages and in the classification tree. 
126 572 Andreas Müller
127 571 Andreas Müller
* **CDM Server**
128 568 Andreas Müller
 * Improved logging
129 576 Andreas Kohlbecker
 * Debian installation package improved
130 571 Andreas Müller
131 568 Andreas Müller
* **CDM Library**
132
 * Improved permissions for users being allowed to edit all taxonomies
133 1 Andreas Kohlbecker
134 568 Andreas Müller
* **TaxEditor**
135 570 Andreas Müller
 * Improved deduplication, especially for taxa entered via taxon node editor
136 1 Andreas Kohlbecker
 * Persons: allow editing lifespan
137 568 Andreas Müller
 * Possibility to create or update database schema via connect dialog
138
 * Improved layout of connect dialog
139 572 Andreas Müller
 * Taxon nodes status with status notes (see Data Model), available in taxon node wizard and in CDM light export
140 570 Andreas Müller
 * Factual Data:
141
     * Possibility to enter temporal data (phenology)
142
     * Factual dataset source is shown as (uneditable) source for each fact
143
     * Facts view: remember expansion state after deleting
144
     * Remove caching form facts view which (resulted in unexpected results)
145
 * Descriptive dataset editor and matrix editor:
146
     * Improve performance of matrix editor
147
     * Add context menu to matrix editor (and remove preliminary buttons)
148
     * Fix failing adding of specimen which are not attached to a field unit
149
     * Remove taxon in descriptive dataset editor only available if taxon has focus
150
     * Fix bug when selecting a character tree for a descriptive dataset
151
 * Reference bulk editor table has new included columns: year, in-reference, uri
152
 * Open link button for entering DOIs in reference details view
153
 * Features:
154
     * Possibility to define if a feature is available for taxa, specimen and/or taxon names
155
 * Improved decimal/rounding handling of quantitative data (e.g. distinguish 9.1 form 9.10)
156
 * Configurable if the old specimen list editor should be avialable via main menu
157 569 Andreas Müller
 * Bug fixes:
158 570 Andreas Müller
     * Broken media deatils view fixed for "MediaSpecimen" 
159 568 Andreas Müller
     * Exception when creating a new taxon 
160 569 Andreas Müller
     * Search does find orphaned synonyms now
161 570 Andreas Müller
     * Term search fixed
162 1 Andreas Kohlbecker
     * Exception in referencing objects view for TextualTypeDesignations
163
     * Exception in name details view if name relations were incomplete (no type, no from-name or no to-name)
164
     * Exception when deleting a descriptive dataset
165 570 Andreas Müller
     * Incorrect context menu for synonyms after moving a synonym into or out of the homotypic group
166
     * Opened selection dialogs lock editing in other windows
167
     * Remember expansions state of sections in details view and supplemental data view (this feature was lost for some time)
168
     * Recently used references list is not emptied anymore after using search dialog for nomenclatural reference
169
     * Bulk editor: multiple deduplications without saving do now remember all deduplications
170
     * Some widget is disposed exceptions fixed
171
     * fix verbatime date not persisted for books
172 565 Andreas Müller
173 573 Andreas Müller
{{ref_issues(-q:Release5.15 , id, subject, status)}}
174 563 Andreas Müller
175 558 Andreas Müller
## CDM Platform 5.14 (released April 8th, 2020)
176 1 Andreas Kohlbecker
177
*Issues: {{ref_issues(-f:fixed_version_id = 293 , -c)}}*
178
179 563 Andreas Müller
*Downloads:* [TaxEditor](https://dev.e-taxonomy.eu/download/taxeditor/5.14.0/), [CDM Server](https://dev.e-taxonomy.eu/download/cdmserver/5.14.0/), [Data Portal](https://dev.e-taxonomy.eu/download/dataportal/5.14.0/)
180
181 558 Andreas Müller
**What's new?**
182
183
* **Data Portal**
184 559 Andreas Müller
    * Structured descriptive data is shown on specimen page as continous text
185
    * Bugfix for the new universal media viewer
186
    * Bugfix for some descriptive data pages for taxon descriptions
187 558 Andreas Müller
188 559 Andreas Müller
* **Import/Export**
189
    * Handling of descriptions improved for ABCD import
190
    * Bug fix for CDM lite export of textual type designation missing a language
191
192 558 Andreas Müller
* **TaxEditor**
193 559 Andreas Müller
    * Set as basionym available also for accepted taxa
194
    * Distribution details view: configurable to show also abbreviation for selected named areas
195
    * Performance improved for preference dependend descriptive data matrix editing
196
    * Cloned descriptions show according icon
197
    * User/roles/rights:
198
            * ROLE_USER_MANAGER is allowed to change passwords
199
            * unnecessary "expired" flags removed from User UI
200 560 Andreas Müller
            * isAdmin valid for all users having ROLE_ADMIN
201 559 Andreas Müller
    * DNA Sample view allows editing of determinations
202
    * Export dialogue remembers last selected folder
203
    * Bug fixes:
204 560 Andreas Müller
         * Handling of preferences for term lists fixed
205 559 Andreas Müller
         * ConcurrentModificationException occurring at different places fixed
206
         * Incorrect handling of "show descriptions only for field units" fixed
207
         * Missing "id in vocabulary" in term labels fixed
208 1 Andreas Kohlbecker
         * Freetext filter for name relationship type selection in name relationship dialogue fixed
209 560 Andreas Müller
         * Exception caused by missing "number of rows in status dropdown" fixed
210 558 Andreas Müller
         * Exception when opening orphaned names in name bulk editor from search result fixed
211
    
212 546 Andreas Müller
213 561 Andreas Müller
{{ref_issues(-q:Release5.14 , id, subject, status)}}
214 533 Andreas Müller
215 1 Andreas Kohlbecker
## CDM Platform 5.13 (released March 23th, 2020)
216 551 Andreas Kohlbecker
217 533 Andreas Müller
*Issues: {{ref_issues(-f:fixed_version_id = 284 , -c)}}*
218
219 563 Andreas Müller
*Downloads:* [TaxEditor](https://dev.e-taxonomy.eu/download/taxeditor/5.13.1/), [CDM Server](https://dev.e-taxonomy.eu/download/cdmserver/5.13.0/), [Data Portal](https://dev.e-taxonomy.eu/download/dataportal/5.13.0/)
220 1 Andreas Kohlbecker
221 548 Andreas Kohlbecker
**What's new?**
222 549 Andreas Kohlbecker
  
223 1 Andreas Kohlbecker
* **Data Portal**
224 549 Andreas Kohlbecker
    * A new image viewer for the dataportal is now available. The new image viewer uses the [iiif](https://iiif.io/) conform [Universalviewer](http://universalviewer.io/).   
225
    * Several bugfixes regarding security and display of structured descriptions etc...
226 548 Andreas Kohlbecker
227
* **Import/Export**
228 552 Andreas Müller
    * DarwinCoreArchive: Categorical and quantitative data added to export
229 548 Andreas Kohlbecker
230 1 Andreas Kohlbecker
* **CDM Library**
231 552 Andreas Müller
    * Caching of in-references for nomenclatural references: only author's family name (without initials) is used now if available
232
    * Some improvements to the rights&roles management for editing of references
233
    * Bugfixes:
234
         * Names without ranks not found in taxon searches
235
         * Find best matching (in terms of size) image representation fixed/improved
236
         * some further bugfixes
237
         
238 1 Andreas Kohlbecker
* **TaxEditor**
239 552 Andreas Müller
     * Fix for failing connections (this might be the reason for many unclear errors that occurred in the past)
240 553 Andreas Müller
     * MacOS X version fixed (TaxEditor available for MacOS X again)
241 552 Andreas Müller
     * Search in bulk editors now also works on abbreviated title(caches)
242
     * Some improvements to the distribution editor
243 553 Andreas Müller
     * Some improvements to preference pages
244 555 Andreas Müller
     * Freetext search for all dropdown boxes available now
245 553 Andreas Müller
     * Search result view moved to the bottom of taxon navigator view (as default)
246
     * Taxon navigator allows open-in for multi-selection for name editor and distribution editor
247
     * Suggested file name for DwC-A export improved
248 555 Andreas Müller
     * Move-to functionality improved in term editor and term tree editor
249 552 Andreas Müller
     * Bugfixes:
250 1 Andreas Kohlbecker
         * Names without ranks not found in search
251 553 Andreas Müller
         * NameInSource only added after moving factual data if requested by the user
252
         * Measurment units added to quantitative data in descriptive data matrix editor
253
         * Automatically refresh available-specimen list for descriptive data matrix if descriptive dataset changes
254
         * Name features not visible in taxon factual data view anymore, but only in name factual data view
255
         * Inheriting sec-reference for root taxa from classification reference works again
256 555 Andreas Müller
         * Selection list for entering states for categorical data is sorted now
257
         * Deleting specimen descriptions possible now
258 556 Andreas Müller
         * Fix for deleting name types
259 550 Andreas Kohlbecker
260 548 Andreas Kohlbecker
* **Web editor (Phycobank registration UI)**
261
    * Bug fix in reference editor 
262 1 Andreas Kohlbecker
    
263 547 Andreas Müller
264 1 Andreas Kohlbecker
{{ref_issues(-q:Release5.13 , id, subject, status)}}
265
266 561 Andreas Müller
## CDM Platform 5.12 (released Jan 20th, 2020)
267 533 Andreas Müller
268 542 Andreas Müller
*Issues: {{ref_issues(-f:fixed_version_id = 283 , -c)}}*
269 496 Andreas Müller
270 563 Andreas Müller
*Downloads:* [TaxEditor](https://dev.e-taxonomy.eu/download/taxeditor/5.12.0/), [CDM Server](https://dev.e-taxonomy.eu/download/cdmserver/5.12.0/), [Data Portal](https://dev.e-taxonomy.eu/download/dataportal/5.12.0/)
271
272 533 Andreas Müller
**What's new?**
273 496 Andreas Müller
274 537 Andreas Müller
* **Data Model**
275
    * Added "per mm²" to measurement units
276 541 Andreas Müller
    * Allow linking to CDM taxa as information source (currently only available for algorithms, not (yet) for editing in TaxEditor)
277 537 Andreas Müller
    
278
* **Data Portal**
279
    * Structured Descriptions
280
          * Show structure descriptions in general page as pseudo feature block (position configurable)
281
          * Implement explicit page for descriptions, using dataset character/feature tree (or general feature tree) for ordering
282
          * Order states by frequency
283
          * Improve display of average values (and other statistical vlaues) and single values
284
          * Support for linking to other CDM records as information source (for aggregated desciptions)
285
    * Show type designations for synonyms
286
    * Improved handling for URLs linking to not existing/deleted records (e.g. deleted polytomous keys)
287
288
* **Import/Export**
289
    * CDM light:
290
        * Typification column added to name and homotypical group files
291
        * Handling of name identifiers fixed
292
293
* **CDM Library**
294
    * Algorithms for descriptive data aggregation (distributions/structured descriptive data) fixed/improved
295 539 Andreas Müller
    * Polynomous key generation algorithm improved
296 537 Andreas Müller
    * Fix bug for deleting a taxon used in 2 different classifications
297 1 Andreas Kohlbecker
    * Fix repair term tree sortindex
298 539 Andreas Müller
    * Allow distribution aggregation to run on taxonomic subtrees
299 537 Andreas Müller
300
* **Documentation**
301 538 Andreas Müller
    * New Documentation available at https://dev.e-taxonomy.eu/redmine/projects/edit/wiki/PlatformDocumentation
302 537 Andreas Müller
303 1 Andreas Kohlbecker
* **TaxEditor**
304 538 Andreas Müller
    * Documentation: see above
305 537 Andreas Müller
    * Editing of structured descriptive data now available as standard feature (was experimental before)
306
            * Character editor
307
            * Term search
308
            * Matrix editor
309 1 Andreas Kohlbecker
            * GFBio and ontology imports
310 538 Andreas Müller
            * Support for "allow duplicates" for term collections
311 1 Andreas Kohlbecker
            * Note: however there are still issues especially with the Character editor which hopefully will be fixed in the next version (we recommend to contact the EDIT team before using this feature)
312 540 Andreas Müller
    * Distribution aggregation available in taxon navigator
313 538 Andreas Müller
    * Added freetext filter to combo boxes
314 1 Andreas Kohlbecker
    * Links to other CDM records as information sources visible (but not editable)
315 538 Andreas Müller
    * "Move to ..." added to term editor
316 537 Andreas Müller
    * Improved handling for different term tree types (ordered, flat, distinct, ...)
317 538 Andreas Müller
    * Specimen import: list of existing BioCase endpoints available as dropdown
318 537 Andreas Müller
    * Fix multiple bugs related to BioCase specimen import
319
    * Fix collapsing tree bug when moving taxa in taxon navigator
320 1 Andreas Kohlbecker
    * Fix bug that reference search dialog does not open under certain conditions
321
322 536 Andreas Müller
{{ref_issues(-q:Release5.12 , id, subject, status)}}
323
324 542 Andreas Müller
## CDM Platform 5.11 (released Nov 15th, 2019)
325 1 Andreas Kohlbecker
326 535 Andreas Müller
*Issues: {{ref_issues(-f:fixed_version_id = 275 , -c)}}*
327
328 563 Andreas Müller
*Downloads:* Ask the edit team for backups of this version
329
330 533 Andreas Müller
**What's new?**
331 496 Andreas Müller
332
* **Data Model**
333 499 Andreas Müller
    * Added count parameter for statics during data aggregation of categorical (structured descriptive) data
334 515 Andreas Müller
    * Added ORCID identifier to persons
335 526 Andreas Müller
    * Added CDM source links (sources may link to other information in the same CDM instance)
336 496 Andreas Müller
337
* **Data Portal**
338 500 Andreas Müller
    * Fixed polytomous key display for key parts linked from multiple places
339 506 Andreas Müller
    * Fix label formatting for specimen with missing collection identifier in specimen tables
340 512 Andreas Kohlbecker
    * Fixing problem with names having multiple nomenclatural status
341 496 Andreas Müller
342
* **Import/Export**
343 505 Andreas Müller
    * ABCD:
344
        * Fix collector and field number handling for derived units missing this data (but available in field unit record)
345 496 Andreas Müller
346
* **CDM Library**
347 517 Andreas Müller
    * Better parsing for infrageneric autonyms with authors
348 530 Andreas Müller
    * Imporved distribution and descriptive data aggregation
349 496 Andreas Müller
350 518 Andreas Müller
* **CDM Server**
351
    * Fix memory leaks
352
353 496 Andreas Müller
* **TaxEditor**
354 507 Andreas Müller
355 1 Andreas Kohlbecker
    * Taxon search: new filter to search only for published taxa 
356 510 Andreas Müller
    * Terms:
357 523 Andreas Müller
          * Tree editor for Named Areas, Ranks and Distribution Status available (to define user defined term collections and orders, including cross-vocabulary collections) - usage of such collections will be implemented in future releases
358 509 Andreas Müller
    * Taxon/Name details view
359
          * Nomenclatural code edition editable for rule considered (nomenclatural status and name relationships)
360
          * Rule considered and nomenclatural code editon visibility configurable (serverside and local)
361 1 Andreas Kohlbecker
          * Minor changes in ordering of misapplied name details view
362 529 Andreas Müller
    * Person details view
363
          * ORCID editable
364 1 Andreas Kohlbecker
    * Taxon navigator:
365
          * Taxon node doubtful flag editable via context menu
366
          * Rename view to "Taxon Navigator" (regression in one of the last releases)
367
          * Refresh problem after editing classfication label or adding child taxon to classification
368
          * Rename open-in for Taxon Node (Wizard) to ... Dialogue
369
          * Reorder and rename import menu (items)
370 532 Andreas Müller
    * Import/Export:
371 510 Andreas Müller
          * Multiple fixes for file based ABCD import
372 522 Andreas Müller
          * Fix for DwC-A export
373 519 Andreas Müller
    * Factual Data View
374
          * Visibility of "modifier" and "modifying text" is configurable now
375 1 Andreas Kohlbecker
    * Distribution Editor
376
          * Default source also used when creating an additional source for an existing source
377 496 Andreas Müller
    * User administration
378 1 Andreas Kohlbecker
          * Better error handling for user and group names with not allowed characters
379 483 Andreas Müller
380 498 Andreas Müller
{{ref_issues(-q:Release5.11 , id, subject, status)}}
381
382 533 Andreas Müller
## CDM Platform 5.10 (released Sep 23rd, 2019)
383 483 Andreas Müller
384 485 Andreas Müller
*Issues: {{ref_issues(-f:fixed_version_id = 274 , -c)}}*
385 453 Andreas Müller
386 563 Andreas Müller
*Downloads:* Ask the edit team for backups of this version
387
388 484 Andreas Müller
 **What's new?**
389
390
* **Data Portal**
391 489 Andreas Kohlbecker
    * Taxon section in name page can be suppressed via settings.
392
    * Bug fix of a regression related to the display of DOIs and publication reference links.
393 484 Andreas Müller
394
* **Import/Export**
395 488 Andreas Kohlbecker
    * CDM light export:
396 492 Katja Luther
        * type designation export differs between textual and specimen type designation
397 493 Katja Luther
    * Biocase search:
398
        * add possibility to search for Higher Taxon
399 1 Andreas Kohlbecker
400 489 Andreas Kohlbecker
* **CDM Library**
401 488 Andreas Kohlbecker
    * Bugfixes and code maintenance
402
        * Providing the default user role USER_MANAGER to all databases.
403
404 1 Andreas Kohlbecker
* **TaxEditor**
405
    * Bugfix for swap taxon and synonym
406 489 Andreas Kohlbecker
    * Further improvements to preference handling 
407 488 Andreas Kohlbecker
    * Search dialogue for distribution areas works with abbreviations
408 1 Andreas Kohlbecker
    * Old taxeditor documentation made available.
409
410
* **Web editor (Phycobank registration UI)**
411 488 Andreas Kohlbecker
    * Name relations and nomencaltural status now offering fields to mention the nomenclatural code edition. 
412
    * Layout and user experience (UX) issues in the UI have been solved (#8014, #8342, #8377). 
413
    * Fixing important bug to prevent data loss and corruption (#8462, #8527)
414 1 Andreas Kohlbecker
415 486 Andreas Müller
{{ref_issues(-q:Release5.10 , id, subject, status)}}
416
417 494 Andreas Müller
## CDM Platform 5.9 (released Aug 29th, 2019)
418 453 Andreas Müller
419 481 Andreas Müller
*Issues: {{ref_issues(-q:Release5.9 , -c)}}*
420 453 Andreas Müller
421 563 Andreas Müller
*Downloads:* [TaxEditor](https://dev.e-taxonomy.eu/download/taxeditor/5.9.0/), [CDM Server](https://dev.e-taxonomy.eu/download/cdmserver/5.9.0/), [Data Portal](https://dev.e-taxonomy.eu/download/dataportal/5.9.0/)
422 453 Andreas Müller
423 563 Andreas Müller
**What's new?**
424
425 477 Andreas Müller
* **Data Model**
426 473 Andreas Müller
 * Term structure improved to allow all types of relations between terms and to allow vocabulary independent term collections/graphs (partly implemented in TaxEditor)
427
 * Add state vocabulary for presence/absence of a biological structure
428
 * Improve structure for inapplicableIf handling in character trees used for descriptive data matrices/datasets and for indentification keys
429
 * Improve authority handling in data model (preparation only)
430 480 Andreas Kohlbecker
 * Allow certain patterns only as usernames (Latin letters, numbers, '_', '.' are allowed)
431 473 Andreas Müller
 * Doubtful (placement) flag for taxon nodes
432 480 Andreas Kohlbecker
 * List of nomenclatural code editions (e.g. Melbourne Code) additional to rule considered in nomenclatural status, name relationship and hybrid relationship
433
 * Fields added to allow externally managed terms and vocabularies (not yet in TaxEditor)
434 474 Andreas Müller
 * Fields for textual/verbatim type designation information
435
 * Possibility to add fixed markers/types to a description (e.g. to mark a description as a computed/aggregated description which should not be editable)  
436 465 Patrick Plitzner
437 473 Andreas Müller
438 465 Patrick Plitzner
* **Data Portal**
439 479 Andreas Kohlbecker
 * Adapted to term structure changes in the data model.
440
 * Improved ordering of type designations in the name and taxon pages.
441
 * Harmonization and improvement of the specimen display in various parts of the portal, including better intra portal linking.
442 1 Andreas Kohlbecker
 * Performance improvement regarding to type designations.
443 479 Andreas Kohlbecker
 * Auto-zooming of maps has been fixed for different map projections.
444 480 Andreas Kohlbecker
 * Improved layout of the registration page to clearly show the nomenclatural act.
445
 * Classification tree horizontally automatically scrolls to active entry.
446 1 Andreas Kohlbecker
447
* **Import/Export**
448 477 Andreas Müller
 * CDM light export:
449
       * add textual/verbatim type designations
450
       * some minor adaptations
451
452
* **CDM Library**
453 476 Andreas Müller
 * Fix and improve polytomous key generation (to be used from descriptive data set, experimental feature)
454 474 Andreas Müller
 * Multiple improvements and bug fixes to web services 
455
456 1 Andreas Kohlbecker
* **TaxEditor**
457
 * Add textual/verbatim type designations to details view
458 473 Andreas Müller
 * Use feature states for applicability of term nodes
459
 * Improvement and harmonization of serverside and local preferences
460 465 Patrick Plitzner
 * Update name in source data when changing an accepted taxon into a synonym (configurable)
461 1 Andreas Kohlbecker
 * Allow setPublish for subtree to include misapplied names, pro parte synonyms and exclude hybrids
462 474 Andreas Müller
 * Seperate term tree editor for each term type available
463 479 Andreas Kohlbecker
 * Warning if misapplied names or pro parte synonyms are used/linked from more then 1 other taxon.
464 474 Andreas Müller
 * Bugs.
465 1 Andreas Kohlbecker
       * fixed term order of term trees
466 465 Patrick Plitzner
467 453 Andreas Müller
{{ref_issues(-q:Release5.9 , id, subject, status)}}
468 481 Andreas Müller
469 453 Andreas Müller
## CDM Platform 5.8 (released on Jul 19th, 2019)
470 462 Andreas Müller
471 454 Andreas Müller
*Issues: {{ref_issues(-f:fixed_version_id = 273 , -c)}}*
472 446 Andreas Müller
473 563 Andreas Müller
*Downloads:* Ask the edit team for backups of this version
474
475 453 Andreas Müller
 **What's new?**
476 1 Andreas Kohlbecker
477 453 Andreas Müller
* **Data Portal**
478
479 460 Andreas Müller
 * cm added as measurment unit
480
481
* **Data Portal**
482
483 457 Andreas Kohlbecker
    * Improvements to the media page related to source references and the media title
484
    * Name page shows more information: name relations, type designation with specimen map, related taxa, nomenclatural acts (registrations)
485 1 Andreas Kohlbecker
        * The automatic redirect behavior to the taxon page is now configurable
486
    * Registration search:
487 460 Andreas Müller
        * Support for filtering by references
488
        * Improved search by type designation status and name
489 457 Andreas Kohlbecker
    * Registration page:
490
        *  Subheadline to show the type of the nomenclatural event
491
    * General layout improvements
492
        * Links to reference pages as unobtrusive icon link 
493
    * Maps:
494 463 Andreas Kohlbecker
        * Support for [OpenTopoMap](https://opentopomap.org/#map=5/49.000/10.000) 
495 464 Andreas Kohlbecker
        * ![](open-topo-map-berlin.png)
496 457 Andreas Kohlbecker
    * User interface to search the Unified Taxonomic Information Service ([UTIS](https://cybertaxonomy.eu/eu-bon/utis/)) 
497
    * Bugfixes related to 
498
        * Name relations
499
        * Nomenclatural status
500
        * Type designations
501 453 Andreas Müller
502 461 Andreas Müller
* **CDM Server**
503
504
 * improved error detection when failing to start
505
506 451 Andreas Müller
* **TaxEditor**
507 1 Andreas Kohlbecker
508
 * improved deduplication for references in name editor (hotfix 5.7.3)
509 460 Andreas Müller
510
 * handling of preferences improved
511
512
       * consistent model to always allow default and specific values and to handle override more intuitive
513
       * area specific status list preferences for distribution data
514
       * status list serverside preferences for distribution data handled in details view
515
       * ranks as serverside preferences
516
       * nomenclatural status as serverside preferences
517
       * visibility of fields Source.idInSource and Source.IdNamespace as preferences 
518
519
 * CDMlight export
520
521
       * includes excluded flag and excluded notes
522
       * sortindex for taxa added
523
       * improvements in ABCD import 
524
525
 * Terms allow adding media in term editor
526 461 Andreas Müller
527
 * Media:
528
529
        * media loaded asynchronously to improve performance (has open issues)
530 451 Andreas Müller
531
 * Bugs
532
533 1 Andreas Kohlbecker
       * exception/freezing when opening name in source search dialogue (hotfix 5.7.3)
534
       * recognize again the previous state (opened sections) of details view and supplemental data view (hotfix 5.7.3)
535 451 Andreas Müller
       * refresh in name bulk editor after search (hotfix 5.7.3)
536 1 Andreas Kohlbecker
537 458 Andreas Kohlbecker
* **Web editor (Phycobank registration UI)**
538
539
    * Registration list view with reference filter
540
    * Curators and admins can edit arbitrary Annotations (Notes)
541 459 Andreas Kohlbecker
    * Bugfixes related to 
542
        * user permissions
543 458 Andreas Kohlbecker
        * ...
544
     
545
546 1 Andreas Kohlbecker
{{ref_issues(-q:Release5.8 , id, subject, status)}}
547
548 462 Andreas Müller
## CDM Platform 5.7 (released on May 6th, 2019)
549 453 Andreas Müller
550 445 Andreas Müller
*Issues: {{ref_issues(-f:fixed_version_id = 269 , -c)}}*
551
552 563 Andreas Müller
*Downloads:* Ask the edit team for backups of this version
553
554 449 Andreas Müller
 **What's new?**
555
556 438 Andreas Müller
* **Data Portal**
557 447 Andreas Müller
558 1 Andreas Kohlbecker
 * Bugfix for setting the feature tree for the general page
559 447 Andreas Müller
560 448 Andreas Müller
* **TaxEditor**
561
562
 * some urgent bugfixes for character matrix editing 
563 447 Andreas Müller
 * possibility to define area specific distribution status for distribution editor (UI for setting this preference is still missing)
564 448 Andreas Müller
 * some bugfixes
565 450 Andreas Kohlbecker
566
* **Web editor (Phycobank registration UI)**
567
568
    * All comboboxes for references are making use of the ellypsed reference labels
569 447 Andreas Müller
    * The TaxonNamePopeditor now supports editing the nomenclatural status
570
    * Name type status filter in registration search simplified
571 1 Andreas Kohlbecker
    * and some bugfixes
572 447 Andreas Müller
573 453 Andreas Müller
{{ref_issues(-q:Release5.7 , id, subject, status)}}
574 447 Andreas Müller
575 1 Andreas Kohlbecker
## CDM Platform 5.6 (released on Apr 12th, 2019)
576 408 Andreas Müller
577 1 Andreas Kohlbecker
*Issues: {{ref_issues(-f:fixed_version_id = 268 , -c)}}*
578
579 563 Andreas Müller
*Downloads:* Ask the edit team for backups of this version
580 1 Andreas Kohlbecker
581 438 Andreas Müller
 **What's new?** 
582 407 Andreas Müller
583 432 Katja Luther
* **Data Model**
584 443 Andreas Müller
 * feature trees have been refactored to typified Term trees which support any type of terms
585
 * added term types to term vocabularies
586
 * added structure, property and regional modifier as new term types
587 432 Katja Luther
588
* **Data Portal**
589 443 Andreas Müller
 * added time period for description elements in data portals
590
 * improve user profile settigs in cdm_dataportal
591
 * harmonize registrationId links and make testing easier
592 432 Katja Luther
 * improve image gallery settings labeling
593
594
* **Import/Export**
595 443 Andreas Müller
 * name facts added to cdm light export
596 432 Katja Luther
597
* **TaxEditor**
598 443 Andreas Müller
 * term editor 
599
        * add "plural" to representations
600
        * new term editor for structures, properties, regional modifers
601
 * feature/term tree editor 
602
        * feature trees became more generic and support all types of terms (not yet fully available in editor)
603
        * restrict editor according to typified term trees
604
 * name editor
605
         * creating duplicates of specimen type designations
606
 * update of open data after updating subtree operations (update publish flag and update sec reference)
607
 * user selection dialogs for group members filter out already added users
608
 * name facts now editable, when selecting name in details view and in name bulk editor
609
 * sources can be added to type designations
610 1 Andreas Kohlbecker
 
611 443 Andreas Müller
 * Bugs
612 1 Andreas Kohlbecker
613 443 Andreas Müller
       * changing of title cache of a factual data set was not possible
614
       * selection dialogs for teams or persons did not filter out institutes
615
       * insufficient rights lead to missing focus in name editor
616
       * fixed title cache issues for taxon descriptions
617 432 Katja Luther
618 442 Andreas Müller
* **Web editor (Phycobank registration UI)**
619 444 Andreas Kohlbecker
    * User friendly message when accessing editors with unsufficient permissions (#8218)
620
    * Registry curator can unlock a published registration for minor changes (#8192)
621
    * Solving a major performance problem related to uninomial und specific epithet comboboxes (#8176)
622
    * Better lables for popup editors breadcrumbs  (#7962)
623
    * ReferenceEditor: optional validation for completenes of Partial values in datePublished (#7968)
624
    * Create blocking relations for un-registered names which are to be used in nomenclatural acts (#8050)
625
    * TaxonNamePopEditor: name part field visibility not correct for all ranks (#7963)
626
    * ReferenceEditor: filter inReferences ONLY by applicable reference type suppess Generic and NULL (#8149)
627
    * ReferencePopupEditor: When coming from NameEdior editing of the inreference should not be blocked (#8191)
628
    * Bugfixes:
629
        * Fixing enabled state of edit buttons in combobox widgets (#8217)
630
        * Solving multiple problems related to problems with hibernate session an transaction handling
631
        * Problem with inserting a section - inReference is "lost" (#8097)
632
        * Error saving name type designation editor due to problem in poupeditor context (#8099)
633
    
634 432 Katja Luther
635
{{ref_issues(-q:Release5.6 , id, subject, status)}}
636
637 420 Andreas Müller
## CDM Platform 5.5 (released on Feb 14th, 2019)
638 407 Andreas Müller
639 1 Andreas Kohlbecker
*Issues: {{ref_issues(-f:fixed_version_id = 267 , -c)}}*
640
641 439 Andreas Müller
*Downloads:* [TaxEditor](https://dev.e-taxonomy.eu/download/taxeditor/5.5.1/), [CDM Server](https://dev.e-taxonomy.eu/download/cdmserver/5.5.3/), [Data Portal](https://dev.e-taxonomy.eu/download/dataportal/5.5.0/)
642 395 Andreas Müller
643 438 Andreas Müller
 **What's new?**
644 1 Andreas Kohlbecker
645 428 Andreas Müller
* **Data Model**
646 1 Andreas Kohlbecker
647 422 Andreas Müller
 * removed/added some attributes from certain attribute types (e.g. removed *date published* and *authorship* from journals and print series, added ISBN to Proceedings)
648
649 423 Andreas Müller
* **CDM Server**
650
651
 * Available as docker container
652
653 422 Andreas Müller
* **Import/Export**
654
655 420 Andreas Müller
 * taxon (tree)index added to CDMlight export
656
657 418 Andreas Müller
* **Dataportal**
658 409 Andreas Müller
659 419 Andreas Müller
 * improved registration page, now showing the complete nomenclatural act data and registration metadata
660 418 Andreas Müller
     * human feedback to users in case a registration is not public or does not exist
661
 * improved diplay of type designations
662
 * improved display of registrations in lists like in search results and reference page
663
 * reference page shows name relations
664
 * details page for field units improved 
665
 * some bugs fixed
666 409 Andreas Müller
667
* **TaxEditor**
668 410 Andreas Müller
669 1 Andreas Kohlbecker
 * Distribution editor
670
671 422 Andreas Müller
     * use new table frame work (so called NAT tables), offering improved usabilty and functionality like filtering, column freezing etc
672
     * improved area selection dialog
673
     * bug fixes
674 1 Andreas Kohlbecker
675 422 Andreas Müller
 * Preferences
676
     
677
     * new menu structure for local preferences (not fully completed yet)
678
     * serverside preferences and local preferenced unsing same user interface pages
679
     * translation to German completed
680
     * improved handling of "(allow) override" functionality
681
     * improved handling of default values
682
     * (the last 2 will be further developed into 1 system with one of the next releases)
683
684
685 414 Andreas Müller
 * References
686 1 Andreas Kohlbecker
     
687 412 Andreas Müller
     * DOI available as attribute
688 410 Andreas Müller
     * warning for multiple usage of references also in details view (not only in editing dialog)
689 422 Andreas Müller
     * improved attribute selection for specific reference types (see data model section above)
690 1 Andreas Kohlbecker
 
691 420 Andreas Müller
 * Rights&Roles
692
     
693
     * Role "remoting" added, only users belonging to a group with role remoting are allowed to open data in TaxEditor 
694 414 Andreas Müller
695
 * Term editor
696 410 Andreas Müller
     
697 409 Andreas Müller
     * performance improved
698 1 Andreas Kohlbecker
     * 2nd symbol for terms available
699 424 Andreas Müller
     * Bugs/exceptions when moving or adding terms fixed 
700 414 Andreas Müller
 
701
 * Feature tree editor
702
703 1 Andreas Kohlbecker
     * drag&drop from (feature) term editor available
704
     * Right click menu added (replacement for buttons)
705
     * copy&paste added (for the rare case that a feature should be reused within the tree)
706
707 424 Andreas Müller
 * Name editor
708 1 Andreas Kohlbecker
709 430 Patrick Plitzner
     * invalid designations available similar to pro parte synonyms and misapplied names (formatting not yet correct)
710 424 Andreas Müller
711
 * Description/Character Editor (experimental, multiple improvements)
712
713
 * Taxon node wizard improved
714
715
 * Automated deduplication of references and authors works also for new taxon dialog (before it worked only in name editor)
716
717 416 Andreas Kohlbecker
 * Bugs
718 422 Andreas Müller
   
719
     * Improved (title)cache updating
720 1 Andreas Kohlbecker
     * Empty dialog for File -> New -> Reference -> Change reference type fixed
721
     * Some exceptions thrown in term editor fixed
722 424 Andreas Müller
     * sometimes invisible deduplication icons fixed in bulk editor
723
     * handling of deleting new+unsaved records fixed in bulk editor    
724 416 Andreas Kohlbecker
725 429 Andreas Kohlbecker
* **Web editor (Phycobank registration UI)**
726 425 Andreas Kohlbecker
   * Reference editor
727 427 Andreas Müller
        * Reference editor: Label In proceedings in InProceedings missing
728
        * ReferencePopupEditor: saving a newly created inreference is not refreshing the inrefernce field with the new entity
729
        * ReferencePopupEditor: apply sensible reference type pre-set for in references 
730
        * ReferenceEditor: filter inReferences by applicable reference type
731
        * ReferenceEditor misses institution, organization and school fields
732 425 Andreas Kohlbecker
   * TaxonNameEditor: 
733
        * Entering data for name parts (genus, specific epithet) is now required
734
        * Exclude current name from name relationship comboboxes  
735
        * orthographic name correction available
736
   * Registration start view:
737 427 Andreas Müller
        * Reference combobox to offer two search modes
738
        * Exclude irrelevant reference types from list of existing publications
739 425 Andreas Kohlbecker
   * Registration Workingset Editor
740
        * A couple of severe bugs fixed
741
        * realiably setting registration date when status is set to PUBLISHED
742
   * Registration search 
743
        * Registration items in list view is using the wrong button icons for blocking regs and validation errors
744
   * SpecimenTypeDesignationEditor
745
        * Display of altitude fixed and also a related problem when saving
746
        * GeoLocationField uses OpenTopoMap
747
        * Collection date supports timespans
748
        * Improved user feedback
749
        * Geolocation 
750 427 Andreas Müller
             * Suopport for reference systems
751
             * Map shows error radius
752 425 Andreas Kohlbecker
   * cdmlib-vaadin UI widgets
753
        * Reference combobox options with ellypsed reference titles 
754 1 Andreas Kohlbecker
        * ToOneRelatedEntityCombobox validation fixed, layout problems solved
755 425 Andreas Kohlbecker
        * PopupEditors notify user on editor changes and allow the user choose from discard or save in a dialog
756
        * PopupEditors show editor context information as 'breadcrumbs' in the header or toolbar.
757
   * Label improvements
758
   * Permission and security improvements
759
   * Performance improvements
760
   * Classification fragments are managed in a non cyclic directed graph, this mainly improves the search capabilities 
761 427 Andreas Müller
        * Automatic management of the graph during editing of RegistrationStatusFieldInstantiator  
762 425 Andreas Kohlbecker
   * Bugs fixed:
763
        * Massive memory consumption problem solved
764
        * Multiple representations problems fixed 
765
        * LazyInitializationExceptions fixed
766
        * Fixing problems with possibly corrupted hiberante sessions
767
   * Complete removal of the rejected messaging prototype implementation
768
     
769 416 Andreas Kohlbecker
770 415 Andreas Kohlbecker
{{ref_issues(-q:Release5.5 , id, subject, status)}}
771
772 395 Andreas Müller
## CDM Platform 5.4 (released on Oct 25th, 2018)
773 1 Andreas Kohlbecker
774
*Issues: {{ref_issues(-f:fixed_version_id = 266 , -c)}}*
775 393 Andreas Müller
776 563 Andreas Müller
*Downloads:* Ask the edit team for backups of this version
777 1 Andreas Kohlbecker
778 395 Andreas Müller
 **What's new?**
779
780 396 Andreas Müller
* **Documentation**
781
782
 * online webservice documentation was broken since 5.3. Fixed.
783
784 395 Andreas Müller
* **Dataportal**
785
786 396 Andreas Müller
 * display of related taxa (misapplied names, pro parte synonyms, concept relations)
787
       * sort order
788
       * hyperlink to related taxa was missing
789
       * further links (???)
790
791 401 Andreas Müller
 * phycobank/name registration related
792 404 Andreas Kohlbecker
       * search via taxon graph (#7835)
793 396 Andreas Müller
       * improvements on name registration page
794 404 Andreas Kohlbecker
       * hide unpublished names, types and registrations (#7723)
795 396 Andreas Müller
796 395 Andreas Müller
* **TaxEditor**
797 406 Andreas Müller
 
798
 * restart menu available
799 397 Andreas Müller
 * distribution editor
800
801
      * further improvements, now it is not an experimental feature anymore (but still has some open issues, we recommend to contact us before using)
802 398 Andreas Müller
      * improved area selection (still some issues)
803
      * predefined source selection
804 399 Andreas Müller
      * support supplemental data
805 405 Andreas Kohlbecker
      * support various symbols/labels for areas and status
806 398 Andreas Müller
807 1 Andreas Kohlbecker
 * performance
808
      * faster loading of details view and other views (open issues exist)
809
      * faster creation of factual data view right click menu
810 397 Andreas Müller
811 398 Andreas Müller
 * bulk editor
812
      * multiple columns available for display and sorting
813
      * symbol indicating deduplication status
814
 
815 400 Andreas Müller
 * navigator
816 399 Andreas Müller
      * set excluded and unplaced via right click menu
817
818 398 Andreas Müller
 * name relationships allow reverse direction
819 1 Andreas Kohlbecker
 * hybrid flags enabled/disabled rank specific
820 401 Andreas Müller
 * determination events can now have sources  
821 402 Andreas Müller
 * factual data
822 397 Andreas Müller
      * improved labels for descriptions including sources
823 1 Andreas Kohlbecker
      * available common name references can be explicitly marked
824
      * reference search on alternative identifiers possible parallel to title (cache) search
825
      * add sources to descriptions when creating them (explicit menu item)
826 398 Andreas Müller
      * reorder menu ("new" on top, ...)
827 405 Andreas Kohlbecker
      * available distribution area vocabularies and status and common name areas definable via DB preferences
828 400 Andreas Müller
829 401 Andreas Müller
 * further database sided preferences implemented (there are still some bugs, we recommend contacting us before using DB sided preferences)
830 397 Andreas Müller
      * exclude specimen, media, import/exports, multiple classification functionality
831 1 Andreas Kohlbecker
      * further attributes for simplified name details view
832 397 Andreas Müller
      * distribution area vocabulary selection
833 1 Andreas Kohlbecker
      * distribution status selection
834
      * checklist perspective as start perspective
835
      * simplify sources view (hide IdInSource and IdNamespace)
836
837 402 Andreas Müller
 * client side (local) preferences stored database specific
838 401 Andreas Müller
      
839 402 Andreas Müller
      * if users use multiple databases client side preferences often need to be different depending on the database in use; now also client side preferences are stored for each database and not for the complete TaxEditor installation anymore (only valid for newly changed preferences)
840 401 Andreas Müller
841 402 Andreas Müller
 * NOTE: preference handling (server and client side) still has some severe open issues, we will try to work on them for the next release, so we recommend to handle with care until then
842 401 Andreas Müller
843 400 Andreas Müller
 * bugs:
844
      * taxon node editor does not allow editing existing taxon data anymore, only taxon node data
845 397 Andreas Müller
      * right click menu sometimes does not show up in name editor
846
      * exceptions when editing terms in term editor
847 1 Andreas Kohlbecker
      * freezing login dialog if no connection established
848
      * exception after saving bulk editor
849 397 Andreas Müller
      * exception during specimen search in bulk editor
850
      * exception when canceling "move elements" in factual data view
851 396 Andreas Müller
      
852
853 395 Andreas Müller
* **Browser Editor (Vaadin)**
854 396 Andreas Müller
855 403 Andreas Kohlbecker
 * performance
856
      * big workingsets in the RegistrationWorkingSetEditor are loading much faster now. This improvement also has positive effects on other editors (#7785)
857
 * usability
858
      * multiple classifications and classification fragments can be merged into a common taxon graph structure. This graph first of all allows searching names by higher ranked names. Edits of names are automatically tracked in the graph. (#7834)
859
      * New mode for the TaxonNameEditor: `VALIDATE_AGAINST_HIGHER_NAME_PART`. This mode requires that a higher name must exising in the data base before it can be used as name part. (#7783, #7648, #7831, #7830, 7845)
860
      * improving some labels in the UI
861 1 Andreas Kohlbecker
 * bugs
862 403 Andreas Kohlbecker
      * memory issues (#7036, #7036)
863
      * problem with session attributes in different CDM Instances
864 395 Andreas Müller
865
866
{{ref_issues(-q:Release5.4 , id, subject, status)}}
867 379 Andreas Müller
868 394 Andreas Müller
869 1 Andreas Kohlbecker
## CDM Platform 5.3 (released on Sep 17th, 2018)
870 393 Andreas Müller
871 563 Andreas Müller
*Downloads:* Ask the edit team for backups of this version
872 381 Andreas Müller
873 379 Andreas Müller
*Issues: {{ref_issues(-f:fixed_version_id = 265 , -c)}}*
874
875
 **What's new?**
876
877
* **General**
878
879 385 Andreas Müller
  * Allow handling "continued" for reference date published for dates like *2017+*
880 379 Andreas Müller
  * Allow filtering some webservices on taxonomic subtrees
881 1 Andreas Kohlbecker
882 379 Andreas Müller
* **Dataportal**
883 384 Andreas Müller
884
 * Creation of data portals with a filter on taxonomic subtrees (e.g. families)
885 387 Andreas Müller
 * Formatting of misapplied names and invalid designations refactored (and hopefully improved) 
886 1 Andreas Kohlbecker
 * Improved advanced search on taxa with geo-filter, * on start does work now, but still remaining issues for searches including * and whitespace
887 387 Andreas Müller
 * Improved handling of specimen with protected cache
888 379 Andreas Müller
 * Tree View for specimen data (still experimental)
889 388 Andreas Müller
 * Bugs
890 379 Andreas Müller
     * Fix for aggregated images not being shown anymore
891
     * Fix empty bibliography sections
892 388 Andreas Müller
     * Fix disabling of determination keys block in tab-less taxon pages
893 379 Andreas Müller
894
895
* **Export**
896
897 1 Andreas Kohlbecker
 * Improved handling for types in CDM light export
898 380 Andreas Müller
 
899 379 Andreas Müller
* **TaxEditor**
900
901 390 Andreas Müller
 * "Continued" for date published (see General section) available in TaxEditor
902 379 Andreas Müller
 * External links for sources (not yet implemented in data portal)
903 1 Andreas Kohlbecker
 * Label changes
904 379 Andreas Müller
 * Consistent handling of Description and DescriptionElement **sources**
905 1 Andreas Kohlbecker
 * Warning if Media are linked multiple times
906 379 Andreas Müller
 * Improved synchronization between views when moving factual data
907 389 Andreas Müller
 * Improved formatting of misapplied names and pro parte synonyms (synchronized with formatting in data portal)
908 379 Andreas Müller
 * Ordering misapplications with defined alphabetic order
909
 * Editing of supplemental data for descriptive data sets
910
 * Specimen Tree Editor collapsable and expandable
911
 * Bugs
912
      * Protected cache handling in details view for References
913
      * Exception when deleting a polytomous key
914
      * Dialog to avoid creating users with duplicated usernames
915
      * Exception when trying to create a new datasource
916
917
* **Browser Editor (Vaadin)**
918 391 Andreas Kohlbecker
    
919
    * Reference editor offers field for adding notes
920
    * Multiple important bug fixes to increase the overall stability and reliance of the registration system
921
        * Preventing from creation of empty registrations 
922 392 Andreas Kohlbecker
        * Problem with inserting several new authors into a new author team solved
923 379 Andreas Müller
        * Memory leak eliminated 
924 383 Andreas Müller
925 373 Andreas Müller
{{ref_issues(-q:Release5.3 , id, subject, status)}}
926
927 1 Andreas Kohlbecker
## CDM Platform 5.2 (released on Aug 17th, 2018)
928 382 Andreas Müller
929 563 Andreas Müller
*Downloads:* Ask the edit team for backups of this version
930 373 Andreas Müller
931
*Issues: {{ref_issues(-f:fixed_version_id = 263 , -c)}}*
932
933
 **What's new?**
934
935
* **General**
936 376 Andreas Müller
937
 * Some improvements for ABCD import
938
 * Some minor improvements for CDM light export
939 373 Andreas Müller
 * New webservice for formatted taxon relationships (misapplications, pro parte synonyms, concept relationships) - available in data portal in next version
940
941
* **Dataportal**
942 374 Andreas Müller
943
 * Reference page
944
     
945
     * proper formatting of taxon names in registration summary
946
     * proper handling of date published without end date
947
948
 * Specimen tab
949
     
950
     * remove "associated with" in compressed table
951 1 Andreas Kohlbecker
     * correct handling of freetext in altitude, distance to gorund and watersurface in default specimen table
952
     * correct handling of missing values for numeric values (do not show 0 anymore) in default specimen table
953 376 Andreas Müller
 
954
 * Name Registration
955
    
956 1 Andreas Kohlbecker
     * TBC
957
958 376 Andreas Müller
* **TaxEditor**
959
  
960
 * Bulk editor
961
     
962
     * improve new implementation with so called NAT tables
963 1 Andreas Kohlbecker
     * asynchronous loading of data for large datasets
964 376 Andreas Müller
965
 * specimen
966
     
967
     * remaining issues for determinations in details view
968 1 Andreas Kohlbecker
 
969 375 Andreas Müller
 * Bugs
970
971
     * Taxa, being misapplied names or pro parte synonyms elsewhere, always show misapplied name details view
972 1 Andreas Kohlbecker
     * specimen server preferences are not saved
973
     * exception handling for media with corrupted metadata
974 376 Andreas Müller
     * exception out of bounds exception after deleting record in bulk editor
975
     * problems with progress monitor for setting publish flag for subtree (maybe some issues open)
976
     * dragging a misapplication on itself throws exception
977 1 Andreas Kohlbecker
     * multiple representations exception when adding annotation in bulk editor
978 376 Andreas Müller
979
 * experimental features 
980 377 Andreas Müller
     
981
     * data aggregation in character matrix
982 376 Andreas Müller
     * improved workflow for editing descriptive data 
983 375 Andreas Müller
984 376 Andreas Müller
* **Browser Editor (Vaadin)**
985
    
986 373 Andreas Müller
     * TBC: name registration issues 
987
988 358 Andreas Müller
{{ref_issues(-q:Release5.2 , id, subject, status)}}
989
990
## CDM Platform 5.1 (released on Jun 27th, 2018)
991 372 Andreas Müller
992 440 Andreas Müller
*Downloads:* [TaxEditor](https://dev.e-taxonomy.eu/download/taxeditor/5.1.2/), [CDM Server](https://dev.e-taxonomy.eu/download/cdmserver/5.1.0/), [Data Portal](https://dev.e-taxonomy.eu/download/dataportal/5.1.0/)
993 367 Andreas Müller
994 358 Andreas Müller
*Issues: {{ref_issues(-f:fixed_version_id = 261 , -c)}}*
995
996
 **What's new?**
997
998 1 Andreas Kohlbecker
* **General**
999 359 Andreas Müller
1000
 * update script to model 5.0 fixed for PostGreSQL databases
1001
 * freetext search indexing fixed after change in misapplied names
1002
 * term related webservices include language information 
1003
1004
* **Dataportal**
1005
1006
 * Withheld taxa with publish=false from dataportal results (not yet implemented for freetext search on factual data)
1007
 * External Links fixed
1008
 * Default visibility for pro parte and partial synonyms and misapplied names
1009
 * Find pro parte and partial synonyms in search
1010
 * Creation date for media visible
1011 358 Andreas Müller
1012 1 Andreas Kohlbecker
* **TaxEditor**
1013 359 Andreas Müller
1014
 * Recently used references list for reference search dialog (bibliographic references only)
1015
 * Find pro parte and partial synonyms in search
1016
 * Default value for taxon publish flag configurable (true, false, inherit)
1017
 * Allow multiple selections for moving taxa
1018
 * Progress monitoring for moving taxa
1019
 * Default nomenclatural status is nom. illeg.
1020
 * Further support for eclipse4
1021
 * Bulk editor
1022
     * change table type (using so called NAT tables now, which are more powerful)
1023
     * sorting for columns by clicking on column headers
1024
     * multi select for deduplication more user friendly
1025
 * Bugs
1026
      * fixed lazy loading exception for misapplied names with type specimen
1027
      * incorrect title cache creation for persons with protected title cache
1028
      * new team member added to the end of the list now
1029
      * some File->New dialogues fixed
1030 358 Andreas Müller
1031 362 Andreas Kohlbecker
* **Browser Editor (Vaadin)**
1032
    * Improved consistency in taxon names by restricting the higher name parts like genus name or species epithet to names which are already known to the system. (#7364)
1033
    * Support for validations and replaced synonyms in the TaxonNameEditor
1034
    * Login dialog can be submitted by pressing the enter key
1035
    * Fields visibility in the ReferenceEditor adapts to the Reference type
1036
    * A Field for editorial notes is now available in TaxonName , NameType and SpecimenType editors
1037
    * Bugs
1038
        * Readonly state problems fixed
1039 358 Andreas Müller
        * Fixing incomplete terms
1040 361 Andreas Kohlbecker
1041
{{ref_issues(-q:Release5.1 , id, subject, status)}}
1042 344 Andreas Müller
1043 1 Andreas Kohlbecker
## CDM Platform 5.0 (released on May 16th, 2018)
1044 355 Andreas Müller
1045 343 Andreas Müller
*Issues: {{ref_issues(-q:Release5.0, -c)}}*
1046 356 Andreas Müller
1047 343 Andreas Müller
 **What's new?**
1048 353 Andreas Müller
1049
* **General**
1050 349 Andreas Müller
1051 1 Andreas Kohlbecker
 * Project Website (cybertaxonomy.org) migrated to Drupal 8
1052 353 Andreas Müller
 * Demo servers renamed to demo I and demo II
1053
 * Improved performance for saving
1054
1055
* **Model**
1056 345 Andreas Müller
1057
 * Micrometer added to measurement units
1058
 * Person last name and first name renamed to given name and family name
1059
 * Add second under definable symbol to defined terms (e.g. for better representations of distribution status)
1060
 * Change type of Media.mediaCreated from DateTime (single date) to TimePeriod (start and end time, freetext, ...)
1061
 * Allow time for TimePeriod (before only dates were handled) -  not yet handled in TaxEditor
1062
 * Support for zoological in-Authors
1063
 * Add verbatim date to publication date of references
1064
 * Individual count for occurrence data changed from numbers to text
1065 346 Andreas Müller
 * Added external links to sources (not yet supported in TaxEditor)
1066 1 Andreas Kohlbecker
 * Rename "WorkingSet" to "DescriptiveDataSet" and make it a so called identifiable entity (=> some further attributes like sources, extensions, ...)
1067
 * Added nomen oblitum to zoological name status vocabulary
1068
1069 348 Andreas Müller
* **TaxEditor**
1070 347 Andreas Müller
 
1071 353 Andreas Müller
 * Further migration to Eclipse4 (e4) => migration finished now except for some open issues.
1072 354 Andreas Müller
 * Hardcoded update sites to avoid problems with automated TaxEditor update in future (and for development)
1073 1 Andreas Kohlbecker
 * Download site shows version number and release date
1074 354 Andreas Müller
 
1075
 * Name editor
1076
      * Specimen Type Designation ordered by type
1077
      * Pro parte and partial synonyms handled similar to misapplied names (internally handled as concept relationships)
1078 353 Andreas Müller
      * Allow editing pro parte and partial misapplied names
1079 354 Andreas Müller
 
1080
 * References
1081
      * Reference search via alternative identifiers available
1082 1 Andreas Kohlbecker
      * References have verbatim date
1083
 
1084 353 Andreas Müller
 * Media representations have fixed order (by creation date in database)
1085 1 Andreas Kohlbecker
 * Allow opening gathering events from referencing objects view
1086 353 Andreas Müller
1087 1 Andreas Kohlbecker
 * New Dialog for editing server based preferences, including some more preferences (but still incomplete)
1088 353 Andreas Müller
1089 1 Andreas Kohlbecker
 * Deleting names and taxa for specimen determinations
1090
1091
 * Usage view migrated to e4 and fully functional again
1092
1093 353 Andreas Müller
 * Taxon navigator
1094 1 Andreas Kohlbecker
       * fully refactored underlying data model
1095
       * improve performance
1096
       * refresh mechanism improved for changes elsewhere
1097 353 Andreas Müller
       * Progress monitor and cancel for set secundum for subtree (not yet available for set publish for subtree)
1098 354 Andreas Müller
1099
 * Feature tree editor
1100
      * Multi-language support for feature tree editor
1101 353 Andreas Müller
      * Details view and supplemental data view for feature tree/nodes
1102 349 Andreas Müller
1103 353 Andreas Müller
 * Rights&Roles: drag&drop for rights on features in rights editor
1104 354 Andreas Müller
1105
 * Facts
1106
      * Fact label in fact view truncated and line breaks removed
1107 352 Andreas Müller
      * Fact have a time scope now in facts details view
1108 347 Andreas Müller
1109 1 Andreas Kohlbecker
 * Refresh:
1110
      * Taxon navigator after changes to taxa, names or sort order
1111
      * Name editors with specimen types after a specimen has been deleted
1112 349 Andreas Müller
      * Name editor after selecting a new taxon for a misapplied name
1113 1 Andreas Kohlbecker
      * Name relationships and similar data in details view after selecting a new name for a taxon
1114 353 Andreas Müller
      * Open taxa refreshed after setting secundum or publish flag for subtree
1115 348 Andreas Müller
      * Refresh reference title cache after changing in-reference title in edit dialog
1116
 
1117
 * Renaming:
1118
      * Person: lastname => family name; firstname => other/given name
1119
      * Specimen Bulk Editor => Specimen Editor (List)  and Derivative Editor => Sepcimen Editor (Tree)
1120
      * Working Set Editor => Descriptive Data Editor
1121 347 Andreas Müller
 * Distribution Editor
1122
      * Available areas as server based preferences
1123
      * Area selection dialog improved
1124
      * some further bug fixes (still some open)    
1125
      
1126
 * Bug fixes:
1127
      * Selection of nomenclatural code in "new taxon" dialog
1128
      * Accepted taxon and new synonym disappear after creating homotypic synonym
1129 1 Andreas Kohlbecker
      * Right click menus in name editor
1130
      * correct handling of doubtful in misapplied names
1131 348 Andreas Müller
      * Missing labels for gathering events in referencing objects view
1132
      * dirty flag after number recomputation in polytomous key
1133
      * saving of preferences only after pressing "Finish" button
1134
      * Exception after selecting a team after team has been merged in bulk editor
1135 1 Andreas Kohlbecker
      * Show only accepted taxa for concept relationship taxon selection and polytomous key taxon selection
1136 349 Andreas Müller
      * Exception when searching for "?" in Taxon search dialog
1137
      * Exception when creating the first node in polytomous key
1138
      * To many menu entries in a fresh name bulk editor
1139
      * Do not allow self-referencing name relationships
1140 350 Andreas Müller
      * Remove "open in ... referencing objects view" where not appropriate
1141
      * Refresh issues for details and supplemental data view
1142 1 Andreas Kohlbecker
      * Exception when deleting a type specimen
1143 349 Andreas Müller
      * Excluded and excluded note notupdated in taxon node wizard
1144 347 Andreas Müller
      * Removing country not possible in specimen editors
1145
      * Dirty flag handling when deleting a synonym in name editor
1146
      * Term could be opened multiple times for same term type, now they are singletons
1147 1 Andreas Kohlbecker
      * Remove old data when again parsing a time period
1148 361 Andreas Kohlbecker
1149 346 Andreas Müller
{{ref_issues(-q:Release5.0 , id, subject, status)}}
1150 343 Andreas Müller
 
1151 346 Andreas Müller
* **Browser Editor (Vaadin)**
1152 1 Andreas Kohlbecker
1153 349 Andreas Müller
 * Many improvements in name registration editor
1154 1 Andreas Kohlbecker
 * Help for distribution editor
1155 344 Andreas Müller
 * Sorting of areas in area selection dialog
1156
1157
 {{ref_issues(-q:Release5.0 , id, subject, status)}}
1158
1159 343 Andreas Müller
1160 1 Andreas Kohlbecker
1161 302 Andreas Müller
1162 1 Andreas Kohlbecker
1163
## Previous Releases Archive
1164
1165
1166
see [[CdmPlatformRoadmapArchive]]