Project

General

Profile

CDM DataPortal » History » Version 53

Niels Hoffmann, 11/15/2010 03:43 PM

1 53 Niels Hoffmann
~~~
2
<code class="html">
3
<div style="font-size:300%; color: #600;">Outdated!</div>
4
~~~
5 1 Andreas Kohlbecker
6 53 Niels Hoffmann
Please see http://wp5.e-taxonomy.eu/portal for documentation on the CDM Dataportal software.
7 1 Andreas Kohlbecker
8
9
10 53 Niels Hoffmann
----
11
12
13
14
15
16
17
18 1 Andreas Kohlbecker
# CDM Dataportal
19 53 Niels Hoffmann
20
21
{{>toc}}
22
23 1 Andreas Kohlbecker
24
25
26 22 Andreas Kohlbecker
----
27 1 Andreas Kohlbecker
28
29 25 Andreas Kohlbecker
_This page gives an overview on the functionality of the dataportal, for information concerning development, implementation & prospective features please refer to the [[CdmDataportalImplementationNotes]]._
30 1 Andreas Kohlbecker
31
32 35 Anahit Babadshanjan
_For information about basic acceptance tests for new dataportal releases please see [[CdmDataportalTest]]._
33
34
35 22 Andreas Kohlbecker
_The mailing list for issues related to the dataportal is edit-portal-editor@googlegroups.com.'
36 1 Andreas Kohlbecker
37
38
39 22 Andreas Kohlbecker
40
----
41
42
43 49 Niels Hoffmann
## Help
44 1 Andreas Kohlbecker
45 37 Andreas Kohlbecker
* [[CDMDataPortalUserFaq|CDM DataPortal User FAQ]]
46 36 Andreas Kohlbecker
47 37 Andreas Kohlbecker
* [[CDMDataPortalAdminFaq|CDM DataPortal Admin FAQ]]
48 36 Andreas Kohlbecker
49 51 Andreas Kohlbecker
* [[CDMDataPortalInstall|CDM DataPortal Install Guide]] in this wiki
50
51 52 Andreas Kohlbecker
* [CDM DataPortal Install Guide](http://wp5.e-taxonomy.eu/cdm-setups/Group/dataportal_installation/) in the CDM Bundle Site
52 36 Andreas Kohlbecker
53 41 Andreas Kohlbecker
54 39 Andreas Kohlbecker
55
56 36 Andreas Kohlbecker
----
57
58
59 22 Andreas Kohlbecker
The EDIT Data Portal publishes taxonomic data data hosted in a [[CommunityStore]] either to a closed community or to the public at large. It has been implemented as a module for the content management system Drupal. The term “content management system” is somewhat misleading here: since the actual content is stored and managed by the CDM, ensuring scientific accuracy and reusability of data. Drupal offers a great deal of flexibility and can be extended almost indefinitely, making it possible to adapt the EDIT Data Portal to the individual needs of a community. Custom web pages, forums, and blogs are only a few of Drupal’s capabilities available out of the box, and there is practically no limit to the number of modules that can be added to enhance a site with for example image galleries. The layout and look and feel of the application can be easily adapted to fit any taste.
60
61
62
The EDIT Data Portal supports zoological and botanical names (support for viral and bacterial names should be available soon), as well as multiple concurrent taxonomies. Rules as specified by the nomenclatural codes ICBN and ICZN are built into the CDM, ensuring that taxon names conform to these standards.
63
64
65
User interface design was guided by the following design principles: provide easy access to all taxa and names; display all relevant information in one place where possible; and reduce complexity without compromising scientific accuracy. A challenge particular to taxonomy is keeping the user from losing his or her bearings while navigating through vast taxonomic trees; to this end, a sophisticated taxonomic tree browser has been developed to reduce confusion and make daily work with such trees more productive. A search function provides an additional way to access taxa.
66
67
68
Each taxon is represented by an individual page, which displays the list of synonyms, related taxa, occurrences, descriptions, media, and more. The list of homotypic and heterotypic synonyms is ordered historically and grouped by types; its layout resembles that found in printed publications. Images of protologues and of type specimens are linked directly from taxon names and synonym lists. In addition, taxon pages will allow users to contribute annotations as text or images.
69
70
71
Currently, EDIT Data Portals and CDM Community Stores are used to store and publish the work of the EDIT exemplar groups focusing on the taxonomic groups Cichorieae, Diptera and Palmae. Links to the demosites are found below.
72
73
74
75
## CDM Dataportal Demo Sites
76
77
78
The capabilities and functions of the CDM Dataportal are demonstrated by the installations for each of the three EDIT WP6 exemplar groups.
79
80
81
82
### Palmweb
83
84 23 Andreas Kohlbecker
85
Palmweb is a prototype portal for information on the diversity of the palm family (Arecaceae or Palmae).
86
87
88
89 46 Andreas Kohlbecker
*Palmae DataPortal*: http://www.palmweb.org
90 22 Andreas Kohlbecker
91 27 David Taylor
92 34 Anahit Babadshanjan
93
*Discussion on requirements*: http://dev.e-taxonomy.eu/trac/wiki/CdmDataportal/Requirements/
94
95
96 23 Andreas Kohlbecker
[!dataportal-palmaepng|50%!] 
97
98
99
100 22 Andreas Kohlbecker
101 1 Andreas Kohlbecker
### Cichorieae Portal
102 22 Andreas Kohlbecker
103 23 Andreas Kohlbecker
104
The Cichorieae Portal is being established as a convenient access to the existing knowledge about this difficult group of plants, based on authoritative taxonomic information.
105 1 Andreas Kohlbecker
106 23 Andreas Kohlbecker
107 44 Andreas Kohlbecker
*Cichorieae DataPortal*: http://wp6-cichorieae.e-taxonomy.eu/portal/
108 34 Anahit Babadshanjan
109
110
[!dataportal-chichorieaepng|50%!] 
111 22 Andreas Kohlbecker
112 23 Andreas Kohlbecker
113
114
115 22 Andreas Kohlbecker
### Diptera Portal
116
117 23 Andreas Kohlbecker
118 1 Andreas Kohlbecker
The Diptera Portal will serve authoritative taxonomic and other information on Diptera (flies and mosquitoes).
119 34 Anahit Babadshanjan
120
121 50 Francisco Revilla
*Diptera DataPortal*: http://160.45.63.151/dataportal/diptera/
122 23 Andreas Kohlbecker
123
124 29 Andreas Müller
[!dataportal-dipterapng|50%!] 
125
126
127
128
129
## Bug & Enhancement Reports
130
131
_registered users only_
132
133
134 30 Andreas Müller
To report bugs and submit enhancement requests please add a new ticket by using the following links for  
135
136 32 Andreas Kohlbecker
* [bugs](http://dev.e-taxonomy.eu/trac/newticket?component=dataportal&milestone=PortalBugfixing01&type=bug)
137 30 Andreas Müller
138 33 Andreas Kohlbecker
  * [bugs in Cichorieae Portal](http://dev.e-taxonomy.eu/trac/newticket?component=dataportal&milestone=PortalBugfixing01&type=bug&summary=CICHORIEAE)
139
140
  * [bugs in Diptera Portal](http://dev.e-taxonomy.eu/trac/newticket?component=dataportal&milestone=PortalBugfixing01&type=bug&summary=DIPTERA)
141
142
  * [bugs in Palmweb Portal](http://dev.e-taxonomy.eu/trac/newticket?component=dataportal&milestone=PortalBugfixing01&type=bug&summary=PALMAE)
143
144
145
* [enhancements](http://dev.e-taxonomy.eu/trac/newticket?component=dataportal&milestone=DrupalPortal07%20Release&type=feature%20request)
146
147
  * [enhancements for Cichorieae Portal](http://dev.e-taxonomy.eu/trac/newticket?component=dataportal&milestone=DrupalPortal07%20Release&type=feature%20request&summary=CICHORIEAE)
148
149
  * [enhancements for Diptera Portal](http://dev.e-taxonomy.eu/trac/newticket?component=dataportal&milestone=DrupalPortal07%20Release&type=feature%20request&summary=DIPTERA)
150
151
  * [enhancements for Palmweb Portal](http://dev.e-taxonomy.eu/trac/newticket?component=dataportal&milestone=DrupalPortal07%20Release&type=feature%20request&summary=PALMAE)
152 30 Andreas Müller
153
You may use the prefilled ticket properties except for the priority property
154 29 Andreas Müller
155
156
Reported bugs you find at
157
158
* http://dev.e-taxonomy.eu/trac/report/31 (bugs) 
159
160
* http://dev.e-taxonomy.eu/trac/report/33 (enhancements)