Project

General

Profile

CDM DataPortal » History » Version 34

Anahit Babadshanjan, 05/20/2009 11:14 AM

1 1 Andreas Kohlbecker
{{>toc}}
2
3
4
5
6
# CDM Dataportal
7
8
9
10 22 Andreas Kohlbecker
----
11 1 Andreas Kohlbecker
12
13 25 Andreas Kohlbecker
_This page gives an overview on the functionality of the dataportal, for information concerning development, implementation & prospective features please refer to the [[CdmDataportalImplementationNotes]]._
14 1 Andreas Kohlbecker
15
16 22 Andreas Kohlbecker
_The mailing list for issues related to the dataportal is edit-portal-editor@googlegroups.com.'
17 1 Andreas Kohlbecker
18
19
20 22 Andreas Kohlbecker
21
----
22
23
24
The EDIT Data Portal publishes taxonomic data data hosted in a [[CommunityStore]] either to a closed community or to the public at large. It has been implemented as a module for the content management system Drupal. The term “content management system” is somewhat misleading here: since the actual content is stored and managed by the CDM, ensuring scientific accuracy and reusability of data. Drupal offers a great deal of flexibility and can be extended almost indefinitely, making it possible to adapt the EDIT Data Portal to the individual needs of a community. Custom web pages, forums, and blogs are only a few of Drupal’s capabilities available out of the box, and there is practically no limit to the number of modules that can be added to enhance a site with for example image galleries. The layout and look and feel of the application can be easily adapted to fit any taste.
25
26
27
The EDIT Data Portal supports zoological and botanical names (support for viral and bacterial names should be available soon), as well as multiple concurrent taxonomies. Rules as specified by the nomenclatural codes ICBN and ICZN are built into the CDM, ensuring that taxon names conform to these standards.
28
29
30
User interface design was guided by the following design principles: provide easy access to all taxa and names; display all relevant information in one place where possible; and reduce complexity without compromising scientific accuracy. A challenge particular to taxonomy is keeping the user from losing his or her bearings while navigating through vast taxonomic trees; to this end, a sophisticated taxonomic tree browser has been developed to reduce confusion and make daily work with such trees more productive. A search function provides an additional way to access taxa.
31
32
33
Each taxon is represented by an individual page, which displays the list of synonyms, related taxa, occurrences, descriptions, media, and more. The list of homotypic and heterotypic synonyms is ordered historically and grouped by types; its layout resembles that found in printed publications. Images of protologues and of type specimens are linked directly from taxon names and synonym lists. In addition, taxon pages will allow users to contribute annotations as text or images.
34
35
36
Currently, EDIT Data Portals and CDM Community Stores are used to store and publish the work of the EDIT exemplar groups focusing on the taxonomic groups Cichorieae, Diptera and Palmae. Links to the demosites are found below.
37
38
39
40
## CDM Dataportal Demo Sites
41
42
43
The capabilities and functions of the CDM Dataportal are demonstrated by the installations for each of the three EDIT WP6 exemplar groups.
44
45
46
47
### Palmweb
48
49 23 Andreas Kohlbecker
50
Palmweb is a prototype portal for information on the diversity of the palm family (Arecaceae or Palmae).
51
52
53
54 34 Anahit Babadshanjan
*Demo site*: http://dev.e-taxonomy.eu/dataportal/palmae/
55 22 Andreas Kohlbecker
56 27 David Taylor
57 28 David Taylor
58 34 Anahit Babadshanjan
*Development preview site*: http://160.45.63.201/dataportal/preview/palmae/
59 1 Andreas Kohlbecker
60
61 34 Anahit Babadshanjan
62
63
*Discussion on requirements*: http://dev.e-taxonomy.eu/trac/wiki/CdmDataportal/Requirements/
64
65
66 23 Andreas Kohlbecker
[!dataportal-palmaepng|50%!] 
67
68
69
70 22 Andreas Kohlbecker
71
### Cichorieae Portal
72 23 Andreas Kohlbecker
73
74 1 Andreas Kohlbecker
The Cichorieae Portal is being established as a convenient access to the existing knowledge about this difficult group of plants, based on authoritative taxonomic information.
75 23 Andreas Kohlbecker
76
77 34 Anahit Babadshanjan
*Demo site*: http://dev.e-taxonomy.eu/dataportal/cichorieae/
78 1 Andreas Kohlbecker
79
80 34 Anahit Babadshanjan
81
*Community site*: http://wp6-cichorieae.e-taxonomy.eu/portal/
82
83
84
85
*Development preview site*: http://160.45.63.201/dataportal/preview/cichorieae
86
87
88 22 Andreas Kohlbecker
[!dataportal-chichorieaepng|50%!] 
89 23 Andreas Kohlbecker
90
91
92 22 Andreas Kohlbecker
93
### Diptera Portal
94 23 Andreas Kohlbecker
95 1 Andreas Kohlbecker
96
The Diptera Portal will serve authoritative taxonomic and other information on Diptera (flies and mosquitoes).
97
98
99 34 Anahit Babadshanjan
*Demo site*: http://dev.e-taxonomy.eu/dataportal/diptera/
100
101
102
103
*Development preview site*: http://160.45.63.201/dataportal/preview/diptera/
104 23 Andreas Kohlbecker
105
106 29 Andreas Müller
[!dataportal-dipterapng|50%!] 
107
108
109
110
111
## Bug & Enhancement Reports
112
113
_registered users only_
114
115
116 30 Andreas Müller
To report bugs and submit enhancement requests please add a new ticket by using the following links for  
117
118 32 Andreas Kohlbecker
* [bugs](http://dev.e-taxonomy.eu/trac/newticket?component=dataportal&milestone=PortalBugfixing01&type=bug)
119 30 Andreas Müller
120 33 Andreas Kohlbecker
  * [bugs in Cichorieae Portal](http://dev.e-taxonomy.eu/trac/newticket?component=dataportal&milestone=PortalBugfixing01&type=bug&summary=CICHORIEAE)
121
122
  * [bugs in Diptera Portal](http://dev.e-taxonomy.eu/trac/newticket?component=dataportal&milestone=PortalBugfixing01&type=bug&summary=DIPTERA)
123
124
  * [bugs in Palmweb Portal](http://dev.e-taxonomy.eu/trac/newticket?component=dataportal&milestone=PortalBugfixing01&type=bug&summary=PALMAE)
125
126
127
* [enhancements](http://dev.e-taxonomy.eu/trac/newticket?component=dataportal&milestone=DrupalPortal07%20Release&type=feature%20request)
128
129
  * [enhancements for Cichorieae Portal](http://dev.e-taxonomy.eu/trac/newticket?component=dataportal&milestone=DrupalPortal07%20Release&type=feature%20request&summary=CICHORIEAE)
130
131
  * [enhancements for Diptera Portal](http://dev.e-taxonomy.eu/trac/newticket?component=dataportal&milestone=DrupalPortal07%20Release&type=feature%20request&summary=DIPTERA)
132
133
  * [enhancements for Palmweb Portal](http://dev.e-taxonomy.eu/trac/newticket?component=dataportal&milestone=DrupalPortal07%20Release&type=feature%20request&summary=PALMAE)
134 30 Andreas Müller
135
You may use the prefilled ticket properties except for the priority property
136 29 Andreas Müller
137
138
Reported bugs you find at
139
140
* http://dev.e-taxonomy.eu/trac/report/31 (bugs) 
141
142
* http://dev.e-taxonomy.eu/trac/report/33 (enhancements)