CDM DataPortal » History » Version 63
Katja Luther, 04/04/2022 12:49 PM
1 | 57 | Andreas Müller | # **OUTDATED** |
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2 | 1 | Andreas Kohlbecker | |
3 | 54 | Andreas Müller | Please see http://cybertaxonomy.eu/portal for documentation on the CDM Dataportal software. |
4 | 1 | Andreas Kohlbecker | |
5 | |||
6 | |||
7 | 53 | Niels Hoffmann | ---- |
8 | |||
9 | 58 | Andreas Müller | ## CDM Dataportal |
10 | 53 | Niels Hoffmann | |
11 | |||
12 | 61 | Katja Luther | {{toc}} |
13 | 53 | Niels Hoffmann | |
14 | 61 | Katja Luther | {{child_pages(depth=1)}} |
15 | 1 | Andreas Kohlbecker | |
16 | |||
17 | ---- |
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18 | |||
19 | 22 | Andreas Kohlbecker | |
20 | 63 | Katja Luther | This page gives an overview on the functionality of the dataportal, for information concerning development, implementation & prospective features please refer to the [[CdmDataportalImplementationNotes]]. |
21 | 1 | Andreas Kohlbecker | |
22 | |||
23 | 63 | Katja Luther | For information about basic acceptance tests for new dataportal releases please see [[CdmDataportalTest]]. |
24 | 35 | Anahit Babadshanjan | |
25 | |||
26 | 63 | Katja Luther | The mailing list for issues related to the dataportal is edit-portal-editor@googlegroups.com.' |
27 | 1 | Andreas Kohlbecker | |
28 | |||
29 | |||
30 | 22 | Andreas Kohlbecker | |
31 | ---- |
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32 | |||
33 | 49 | Niels Hoffmann | ## Help |
34 | 1 | Andreas Kohlbecker | |
35 | 37 | Andreas Kohlbecker | * [[CDMDataPortalUserFaq|CDM DataPortal User FAQ]] |
36 | 36 | Andreas Kohlbecker | |
37 | 37 | Andreas Kohlbecker | * [[CDMDataPortalAdminFaq|CDM DataPortal Admin FAQ]] |
38 | 36 | Andreas Kohlbecker | |
39 | 51 | Andreas Kohlbecker | * [[CDMDataPortalInstall|CDM DataPortal Install Guide]] in this wiki |
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41 | 54 | Andreas Müller | * [CDM DataPortal Install Guide](http://cybertaxonomy.eu/cdm-setups/Group/dataportal_installation/) in the CDM Bundle Site |
42 | 1 | Andreas Kohlbecker | |
43 | 62 | Katja Luther | * [[CdmDataportalMultilingual|Multilingual dataportal]] |
44 | 41 | Andreas Kohlbecker | |
45 | 39 | Andreas Kohlbecker | |
46 | 1 | Andreas Kohlbecker | |
47 | 62 | Katja Luther | |
48 | |||
49 | 36 | Andreas Kohlbecker | ---- |
50 | |||
51 | |||
52 | 60 | Katja Luther | The EDIT Data Portal publishes taxonomic data data hosted in a [[CommunityStore]] either to a closed community or to the public at large. It has been implemented as a module for the content management system Drupal. The term "content management system" is somewhat misleading here: since the actual content is stored and managed by the CDM, ensuring scientific accuracy and reusability of data. Drupal offers a great deal of flexibility and can be extended almost indefinitely, making it possible to adapt the EDIT Data Portal to the individual needs of a community. Custom web pages, forums, and blogs are only a few of Drupal's capabilities available out of the box, and there is practically no limit to the number of modules that can be added to enhance a site with for example image galleries. The layout and look and feel of the application can be easily adapted to fit any taste. |
53 | 22 | Andreas Kohlbecker | |
54 | |||
55 | The EDIT Data Portal supports zoological and botanical names (support for viral and bacterial names should be available soon), as well as multiple concurrent taxonomies. Rules as specified by the nomenclatural codes ICBN and ICZN are built into the CDM, ensuring that taxon names conform to these standards. |
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58 | User interface design was guided by the following design principles: provide easy access to all taxa and names; display all relevant information in one place where possible; and reduce complexity without compromising scientific accuracy. A challenge particular to taxonomy is keeping the user from losing his or her bearings while navigating through vast taxonomic trees; to this end, a sophisticated taxonomic tree browser has been developed to reduce confusion and make daily work with such trees more productive. A search function provides an additional way to access taxa. |
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61 | Each taxon is represented by an individual page, which displays the list of synonyms, related taxa, occurrences, descriptions, media, and more. The list of homotypic and heterotypic synonyms is ordered historically and grouped by types; its layout resembles that found in printed publications. Images of protologues and of type specimens are linked directly from taxon names and synonym lists. In addition, taxon pages will allow users to contribute annotations as text or images. |
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64 | Currently, EDIT Data Portals and CDM Community Stores are used to store and publish the work of the EDIT exemplar groups focusing on the taxonomic groups Cichorieae, Diptera and Palmae. Links to the demosites are found below. |
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65 | |||
66 | ## CDM Dataportal Demo Sites |
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68 | |||
69 | The capabilities and functions of the CDM Dataportal are demonstrated by the installations for each of the three EDIT WP6 exemplar groups. |
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70 | |||
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72 | |||
73 | ### Palmweb |
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74 | |||
75 | 23 | Andreas Kohlbecker | |
76 | Palmweb is a prototype portal for information on the diversity of the palm family (Arecaceae or Palmae). |
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78 | |||
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80 | 46 | Andreas Kohlbecker | *Palmae DataPortal*: http://www.palmweb.org |
81 | 22 | Andreas Kohlbecker | |
82 | 27 | David Taylor | |
83 | 34 | Anahit Babadshanjan | |
84 | *Discussion on requirements*: http://dev.e-taxonomy.eu/trac/wiki/CdmDataportal/Requirements/ |
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85 | |||
86 | |||
87 | 23 | Andreas Kohlbecker | [!dataportal-palmaepng|50%!] |
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90 | |||
91 | 22 | Andreas Kohlbecker | |
92 | 1 | Andreas Kohlbecker | ### Cichorieae Portal |
93 | 22 | Andreas Kohlbecker | |
94 | 23 | Andreas Kohlbecker | |
95 | The Cichorieae Portal is being established as a convenient access to the existing knowledge about this difficult group of plants, based on authoritative taxonomic information. |
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96 | 1 | Andreas Kohlbecker | |
97 | 23 | Andreas Kohlbecker | |
98 | 44 | Andreas Kohlbecker | *Cichorieae DataPortal*: http://wp6-cichorieae.e-taxonomy.eu/portal/ |
99 | 34 | Anahit Babadshanjan | |
100 | |||
101 | [!dataportal-chichorieaepng|50%!] |
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102 | 22 | Andreas Kohlbecker | |
103 | 23 | Andreas Kohlbecker | |
104 | |||
105 | |||
106 | 22 | Andreas Kohlbecker | ### Diptera Portal |
107 | |||
108 | 23 | Andreas Kohlbecker | |
109 | 1 | Andreas Kohlbecker | The Diptera Portal will serve authoritative taxonomic and other information on Diptera (flies and mosquitoes). |
110 | 34 | Anahit Babadshanjan | |
111 | |||
112 | 50 | Francisco Revilla | *Diptera DataPortal*: http://160.45.63.151/dataportal/diptera/ |
113 | 23 | Andreas Kohlbecker | |
114 | |||
115 | 29 | Andreas Müller | [!dataportal-dipterapng|50%!] |
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117 | |||
118 | |||
119 | |||
120 | ## Bug & Enhancement Reports |
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121 | |||
122 | _registered users only_ |
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123 | |||
124 | |||
125 | 30 | Andreas Müller | To report bugs and submit enhancement requests please add a new ticket by using the following links for |
126 | |||
127 | 32 | Andreas Kohlbecker | * [bugs](http://dev.e-taxonomy.eu/trac/newticket?component=dataportal&milestone=PortalBugfixing01&type=bug) |
128 | 30 | Andreas Müller | |
129 | 33 | Andreas Kohlbecker | * [bugs in Cichorieae Portal](http://dev.e-taxonomy.eu/trac/newticket?component=dataportal&milestone=PortalBugfixing01&type=bug&summary=CICHORIEAE) |
130 | |||
131 | * [bugs in Diptera Portal](http://dev.e-taxonomy.eu/trac/newticket?component=dataportal&milestone=PortalBugfixing01&type=bug&summary=DIPTERA) |
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132 | |||
133 | * [bugs in Palmweb Portal](http://dev.e-taxonomy.eu/trac/newticket?component=dataportal&milestone=PortalBugfixing01&type=bug&summary=PALMAE) |
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135 | |||
136 | * [enhancements](http://dev.e-taxonomy.eu/trac/newticket?component=dataportal&milestone=DrupalPortal07%20Release&type=feature%20request) |
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137 | |||
138 | * [enhancements for Cichorieae Portal](http://dev.e-taxonomy.eu/trac/newticket?component=dataportal&milestone=DrupalPortal07%20Release&type=feature%20request&summary=CICHORIEAE) |
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140 | * [enhancements for Diptera Portal](http://dev.e-taxonomy.eu/trac/newticket?component=dataportal&milestone=DrupalPortal07%20Release&type=feature%20request&summary=DIPTERA) |
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141 | |||
142 | * [enhancements for Palmweb Portal](http://dev.e-taxonomy.eu/trac/newticket?component=dataportal&milestone=DrupalPortal07%20Release&type=feature%20request&summary=PALMAE) |
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143 | 30 | Andreas Müller | |
144 | You may use the prefilled ticket properties except for the priority property |
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145 | 29 | Andreas Müller | |
146 | |||
147 | Reported bugs you find at |
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148 | |||
149 | * http://dev.e-taxonomy.eu/trac/report/31 (bugs) |
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150 | |||
151 | * http://dev.e-taxonomy.eu/trac/report/33 (enhancements) |