EDIT

package org.bgbm.biovel.drf.checklist;

import java.util.ArrayList;

import java.util.Iterator;

import java.util.List;

import javax.xml.bind.JAXBException;

import org.bgbm.biovel.drf.checklist.DRFChecklistException;

import org.bgbm.biovel.drf.checklist.GBIFBetaBackboneClient;

import org.bgbm.biovel.drf.checklist.SearchMode;

import org.bgbm.biovel.drf.client.ServiceProviderInfo;

import org.bgbm.biovel.drf.input.DRFCSVInputParser;

import org.bgbm.biovel.drf.input.DRFInputException;

import org.bgbm.biovel.drf.tnr.msg.TnrMsg;

import org.bgbm.biovel.drf.utils.BiovelUtils;

import org.bgbm.biovel.drf.utils.JSONUtils;

import org.bgbm.biovel.drf.utils.TnrMsgException;

import org.bgbm.biovel.drf.utils.TnrMsgUtils;

import org.junit.BeforeClass;

import org.junit.Ignore;

import org.junit.Test;

@Ignore

public class GBIFBetaChecklistTest {

    private static DRFCSVInputParser parser;

    private static List<String> nameCompleteList;

    private static ServiceProviderInfo ci;

    @BeforeClass

    public static void  setup() {

        parser = new DRFCSVInputParser();

        nameCompleteList = new ArrayList<String>();

        nameCompleteList.add("Ameira divagans");

        nameCompleteList.add("Boccardi redeki");

        nameCompleteList.add("Bougainvillia rugosa");

        nameCompleteList.add("Branchiura sowerbyi");

        nameCompleteList.add("Cercopagis pengoi");

        nameCompleteList.add("Chelicorophium curvispinum");

        ci = new ServiceProviderInfo(GBIFBetaBackboneClient.ID,

                GBIFBetaBackboneClient.LABEL,

                GBIFBetaBackboneClient.URL,

                GBIFBetaBackboneClient.DATA_AGR_URL, ServiceProviderInfo.DEFAULT_SEARCH_MODE);

        ci.addSubChecklist(new ServiceProviderInfo("1", "GBIF NUB Taxonomy", "http://ecat-dev.gbif.org/checklist/1"));

    }

    @Test

    public void convertChecklistInfoToJson() throws DRFChecklistException {

        String checklistInfoJson = JSONUtils.convertObjectToJson(ci);

        System.out.println("Json : " + checklistInfoJson);

    }

    @Test

    public void nameCompleteTest() throws DRFChecklistException, DRFInputException, JAXBException, TnrMsgException {

        parser = new DRFCSVInputParser();

        List<TnrMsg> tnrMsgs = parser.parse(BiovelUtils.getResourceAsString("/org/bgbm/biovel/drf/tnr/nameCompleteOnly.csv","UTF-8"));

        //List<TnrMsg> tnrMsgs = parser.parse(BiovelUtils.getResourceAsString("/org/bgbm/biovel/drf/tnr/singleNameCompleteOnly.csv","UTF-8"));

        GBIFBetaBackboneClient gbbc =  new GBIFBetaBackboneClient(JSONUtils.convertObjectToJson(ci));

        Iterator<TnrMsg> tnrMsgItr = tnrMsgs.iterator();

        while(tnrMsgItr.hasNext()) {

            TnrMsg tnrMsg = tnrMsgItr.next();

            TnrMsgUtils.updateWithSearchMode(tnrMsg, SearchMode.scientificNameExact);

            gbbc.queryChecklist(tnrMsg);

            String outputXML = TnrMsgUtils.convertTnrMsgToXML(tnrMsg);

            System.out.println(outputXML);

        }

    }

}