2 |
2 |
|
3 |
3 |
import org.eclipse.jface.action.ContributionItem;
|
4 |
4 |
import org.eclipse.jface.action.IContributionItem;
|
5 |
|
import org.eclipse.jface.util.LocalSelectionTransfer;
|
6 |
|
import org.eclipse.jface.viewers.ISelection;
|
7 |
|
import org.eclipse.jface.viewers.TreeNode;
|
8 |
5 |
import org.eclipse.swt.SWT;
|
9 |
6 |
import org.eclipse.swt.events.SelectionAdapter;
|
10 |
7 |
import org.eclipse.swt.events.SelectionEvent;
|
11 |
8 |
import org.eclipse.swt.widgets.Menu;
|
12 |
9 |
import org.eclipse.swt.widgets.MenuItem;
|
13 |
|
import org.eclipse.ui.IEditorPart;
|
14 |
10 |
import org.eclipse.ui.IWorkbenchPart;
|
15 |
11 |
import org.eclipse.ui.IWorkbenchWindow;
|
16 |
12 |
import org.eclipse.ui.PlatformUI;
|
17 |
13 |
import org.eclipse.ui.actions.CompoundContributionItem;
|
18 |
14 |
|
19 |
|
import eu.etaxonomy.cdm.api.service.molecular.ISequenceService;
|
|
15 |
import eu.etaxonomy.cdm.api.service.IOccurrenceService;
|
20 |
16 |
import eu.etaxonomy.cdm.hibernate.HibernateProxyHelper;
|
21 |
17 |
import eu.etaxonomy.cdm.model.common.CdmBase;
|
22 |
|
import eu.etaxonomy.cdm.model.molecular.Sequence;
|
23 |
|
import eu.etaxonomy.cdm.model.molecular.SingleRead;
|
|
18 |
import eu.etaxonomy.cdm.model.description.Feature;
|
|
19 |
import eu.etaxonomy.cdm.model.description.IndividualsAssociation;
|
|
20 |
import eu.etaxonomy.cdm.model.description.TaxonDescription;
|
|
21 |
import eu.etaxonomy.cdm.model.occurrence.FieldUnit;
|
24 |
22 |
import eu.etaxonomy.cdm.model.taxon.Taxon;
|
25 |
|
import eu.etaxonomy.taxeditor.editor.EditorUtil;
|
26 |
|
import eu.etaxonomy.taxeditor.editor.Messages;
|
27 |
23 |
import eu.etaxonomy.taxeditor.editor.view.derivate.DerivateView;
|
28 |
24 |
import eu.etaxonomy.taxeditor.model.MessagingUtils;
|
29 |
25 |
import eu.etaxonomy.taxeditor.store.CdmStore;
|
... | ... | |
34 |
30 |
*/
|
35 |
31 |
public class CreateFieldUnitContextMenu extends CompoundContributionItem {
|
36 |
32 |
|
37 |
|
private enum CommandType{
|
38 |
|
COPY_TO_CLIPBOARD,
|
39 |
|
REMOVE_FROM_SEQUENCE,
|
40 |
|
ADD_TO_SEQUENCE
|
|
33 |
private enum CommandType {
|
|
34 |
COPY_TO_CLIPBOARD, REMOVE_FROM_SEQUENCE, ADD_TO_SEQUENCE
|
41 |
35 |
}
|
42 |
36 |
|
43 |
37 |
@Override
|
... | ... | |
49 |
43 |
final IWorkbenchWindow window = PlatformUI.getWorkbench().getActiveWorkbenchWindow();
|
50 |
44 |
IWorkbenchPart activePart = window.getActivePage().getActivePart();
|
51 |
45 |
if(activePart instanceof DerivateView){
|
52 |
|
MenuItem item = new MenuItem(menu, SWT.NONE);
|
53 |
|
item.setText("Create FieldUnit");
|
54 |
|
if(((DerivateView) activePart).isListenToSelectionChange()){
|
55 |
|
Object selectionInput = ((DerivateView) activePart).getSelectionInput();
|
|
46 |
final DerivateView derivateView = (DerivateView) activePart;
|
|
47 |
if(derivateView.isListenToSelectionChange()){
|
|
48 |
Object selectionInput = derivateView.getSelectionInput();
|
56 |
49 |
if(selectionInput instanceof CdmBase && ((CdmBase) selectionInput).isInstanceOf(Taxon.class)){
|
57 |
|
Taxon taxon = HibernateProxyHelper.deproxy(selectionInput, Taxon.class);
|
|
50 |
final Taxon taxon = HibernateProxyHelper.deproxy(selectionInput, Taxon.class);
|
|
51 |
MenuItem item = new MenuItem(menu, SWT.NONE);
|
58 |
52 |
item.setText("Create FieldUnit (attach to "+taxon.getTitleCache()+")");
|
59 |
|
}
|
60 |
|
}
|
61 |
|
item.addSelectionListener(new WidgetSelectionListener(CommandType.ADD_TO_SEQUENCE));
|
62 |
|
}
|
|
53 |
item.addSelectionListener(new SelectionAdapter() {
|
|
54 |
@Override
|
|
55 |
public void widgetSelected(SelectionEvent e) {
|
|
56 |
if(derivateView.isDirty()){
|
|
57 |
MessagingUtils.warningDialog(DerivateView.VIEW_HAS_UNSAVED_CHANGES, this, DerivateView.YOU_NEED_TO_SAVE_BEFORE_PERFORMING_THIS_ACTION);
|
|
58 |
return;
|
|
59 |
}
|
|
60 |
FieldUnit fieldUnit = FieldUnit.NewInstance();
|
|
61 |
fieldUnit = CdmBase.deproxy(CdmStore.getService(IOccurrenceService.class).save(fieldUnit), FieldUnit.class);
|
|
62 |
IndividualsAssociation association = IndividualsAssociation.NewInstance(fieldUnit);
|
|
63 |
association.setFeature(Feature.SPECIMEN());
|
|
64 |
TaxonDescription description;
|
|
65 |
if(!taxon.getDescriptions().isEmpty()){
|
|
66 |
description = taxon.getDescriptions().iterator().next();
|
|
67 |
}
|
|
68 |
else{
|
|
69 |
description = TaxonDescription.NewInstance(taxon);
|
|
70 |
}
|
|
71 |
description.addElement(IndividualsAssociation.NewInstance(fieldUnit));
|
63 |
72 |
|
64 |
|
|
65 |
|
final ISelection selection = window.getActivePage().getSelection();
|
66 |
|
TreeNode selectedTreeNode = EditorUtil.getTreeNodeOfSelection(selection);
|
67 |
|
TreeNode clipboardNode = EditorUtil.getTreeNodeOfSelection(LocalSelectionTransfer.getTransfer().getSelection());
|
68 |
|
if(selectedTreeNode!=null){
|
69 |
|
//context menu for Sequence
|
70 |
|
if(selectedTreeNode.getValue() instanceof Sequence
|
71 |
|
&& clipboardNode!=null && clipboardNode.getValue() instanceof SingleRead){
|
72 |
|
MenuItem item = new MenuItem(menu, SWT.NONE);
|
73 |
|
item.setText(Messages.SingleReadSequenceContextMenu_REUSE_SINGLE_READ_HERE);
|
74 |
|
item.addSelectionListener(new WidgetSelectionListener(CommandType.ADD_TO_SEQUENCE));
|
|
73 |
derivateView.getConversationHolder().commit();
|
|
74 |
derivateView.addFieldUnit(fieldUnit);
|
|
75 |
derivateView.refreshTree();
|
|
76 |
}
|
|
77 |
});
|
|
78 |
}
|
75 |
79 |
}
|
76 |
|
else if(selectedTreeNode.getValue() instanceof SingleRead){
|
|
80 |
else{
|
77 |
81 |
MenuItem item = new MenuItem(menu, SWT.NONE);
|
78 |
|
item.setText(Messages.SingleReadSequenceContextMenu_REUSE_FOR_SEQUENCE);
|
79 |
|
item.addSelectionListener(new WidgetSelectionListener(CommandType.COPY_TO_CLIPBOARD));
|
80 |
|
if(activePart instanceof DerivateView
|
81 |
|
&& ((DerivateView) activePart).getMultiLinkSingleReads().contains(selectedTreeNode.getValue())){
|
82 |
|
MenuItem unlinkItem = new MenuItem(menu, SWT.NONE);
|
83 |
|
unlinkItem.setText(Messages.SingleReadSequenceContextMenu_REMOVE_FROM_SEQUENCE);
|
84 |
|
unlinkItem.addSelectionListener(new WidgetSelectionListener(CommandType.REMOVE_FROM_SEQUENCE));
|
85 |
|
}
|
|
82 |
item.setText("Create FieldUnit");
|
|
83 |
item.addSelectionListener(new SelectionAdapter() {
|
|
84 |
@Override
|
|
85 |
public void widgetSelected(SelectionEvent e) {
|
|
86 |
if(derivateView.isDirty()){
|
|
87 |
MessagingUtils.warningDialog(DerivateView.VIEW_HAS_UNSAVED_CHANGES, this, DerivateView.YOU_NEED_TO_SAVE_BEFORE_PERFORMING_THIS_ACTION);
|
|
88 |
return;
|
|
89 |
}
|
|
90 |
FieldUnit fieldUnit = FieldUnit.NewInstance();
|
|
91 |
fieldUnit = CdmBase.deproxy(CdmStore.getService(IOccurrenceService.class).save(fieldUnit), FieldUnit.class);
|
|
92 |
derivateView.getConversationHolder().commit();
|
|
93 |
derivateView.addFieldUnit(fieldUnit);
|
|
94 |
derivateView.refreshTree();
|
|
95 |
}
|
|
96 |
});
|
86 |
97 |
}
|
87 |
98 |
}
|
88 |
99 |
}
|
... | ... | |
90 |
101 |
};
|
91 |
102 |
return contributionItems;
|
92 |
103 |
}
|
93 |
|
|
94 |
|
private class WidgetSelectionListener extends SelectionAdapter{
|
95 |
|
private final CommandType commandType;
|
96 |
|
|
97 |
|
/**
|
98 |
|
* @param selectedTreeNode
|
99 |
|
* @param clipboardNode
|
100 |
|
* @param commandType
|
101 |
|
*/
|
102 |
|
public WidgetSelectionListener(CommandType commandType) {
|
103 |
|
this.commandType = commandType;
|
104 |
|
}
|
105 |
|
|
106 |
|
@Override
|
107 |
|
public void widgetSelected(SelectionEvent e) {
|
108 |
|
IEditorPart activeEditor = PlatformUI.getWorkbench().getActiveWorkbenchWindow().getActivePage().getActiveEditor();
|
109 |
|
ISelection clipBoardSelection = LocalSelectionTransfer.getTransfer().getSelection();
|
110 |
|
final ISelection selection = PlatformUI.getWorkbench().getActiveWorkbenchWindow().getActivePage().getSelection();
|
111 |
|
TreeNode clipBoardTreeNode = EditorUtil.getTreeNodeOfSelection(clipBoardSelection);
|
112 |
|
TreeNode selectedTreeNode = EditorUtil.getTreeNodeOfSelection(selection);
|
113 |
|
switch (commandType) {
|
114 |
|
case REMOVE_FROM_SEQUENCE:
|
115 |
|
if(activeEditor.isDirty()){
|
116 |
|
MessagingUtils.warningDialog(DerivateView.VIEW_HAS_UNSAVED_CHANGES, this, DerivateView.YOU_NEED_TO_SAVE_BEFORE_PERFORMING_THIS_ACTION);
|
117 |
|
return;
|
118 |
|
}
|
119 |
|
if(selectedTreeNode!=null && selectedTreeNode.getParent()!=null &&
|
120 |
|
selectedTreeNode.getValue() instanceof SingleRead && selectedTreeNode.getParent().getValue() instanceof Sequence) {
|
121 |
|
Sequence sequence = (Sequence) selectedTreeNode.getParent().getValue();
|
122 |
|
sequence.removeSingleRead((SingleRead) selectedTreeNode.getValue());
|
123 |
|
CdmStore.getService(ISequenceService.class).saveOrUpdate(sequence);
|
124 |
|
if(activeEditor instanceof DerivateView) {
|
125 |
|
DerivateView derivateView = (DerivateView)activeEditor;
|
126 |
|
derivateView.getConversationHolder().commit();
|
127 |
|
derivateView.refreshTree();
|
128 |
|
}
|
129 |
|
}
|
130 |
|
|
131 |
|
break;
|
132 |
|
case ADD_TO_SEQUENCE:
|
133 |
|
if(activeEditor.isDirty()){
|
134 |
|
MessagingUtils.warningDialog(DerivateView.VIEW_HAS_UNSAVED_CHANGES, this, DerivateView.YOU_NEED_TO_SAVE_BEFORE_PERFORMING_THIS_ACTION);
|
135 |
|
return;
|
136 |
|
}
|
137 |
|
if(clipBoardTreeNode!=null && clipBoardTreeNode.getValue() instanceof SingleRead
|
138 |
|
&& selectedTreeNode!=null && selectedTreeNode.getValue() instanceof Sequence){
|
139 |
|
SingleRead singleRead = (SingleRead)clipBoardTreeNode.getValue();
|
140 |
|
Sequence sequence = (Sequence)selectedTreeNode.getValue();
|
141 |
|
sequence.addSingleRead(singleRead);
|
142 |
|
CdmStore.getService(ISequenceService.class).saveOrUpdate(sequence);
|
143 |
|
if(activeEditor instanceof DerivateView) {
|
144 |
|
DerivateView derivateView = (DerivateView)activeEditor;
|
145 |
|
derivateView.getConversationHolder().commit();
|
146 |
|
derivateView.refreshTree();
|
147 |
|
LocalSelectionTransfer.getTransfer().setSelection(null);
|
148 |
|
}
|
149 |
|
}
|
150 |
|
break;
|
151 |
|
case COPY_TO_CLIPBOARD:
|
152 |
|
LocalSelectionTransfer.getTransfer().setSelection(selection);
|
153 |
|
break;
|
154 |
|
}
|
155 |
|
}
|
156 |
|
}
|
157 |
104 |
}
|
|
105 |
|
Implement handler for creating (non-)taxon associated FieldUnits