|
1
|
/**
|
|
2
|
* Copyright (C) 2011 EDIT
|
|
3
|
* European Distributed Institute of Taxonomy
|
|
4
|
* http://www.e-taxonomy.eu
|
|
5
|
*
|
|
6
|
* The contents of this file are subject to the Mozilla Public License Version 1.1
|
|
7
|
* See LICENSE.TXT at the top of this package for the full license terms.
|
|
8
|
*/
|
|
9
|
|
|
10
|
package eu.etaxonomy.taxeditor.view.e4.details;
|
|
11
|
|
|
12
|
import java.util.HashSet;
|
|
13
|
import java.util.Set;
|
|
14
|
|
|
15
|
import javax.inject.Inject;
|
|
16
|
|
|
17
|
import org.eclipse.e4.core.di.annotations.Optional;
|
|
18
|
import org.eclipse.e4.ui.di.UIEventTopic;
|
|
19
|
import org.eclipse.jface.viewers.ISelection;
|
|
20
|
import org.eclipse.jface.viewers.IStructuredSelection;
|
|
21
|
import org.eclipse.jface.viewers.SelectionChangedEvent;
|
|
22
|
import org.eclipse.jface.viewers.TreeNode;
|
|
23
|
import org.eclipse.swt.SWT;
|
|
24
|
import org.eclipse.ui.forms.widgets.ExpandableComposite;
|
|
25
|
|
|
26
|
import eu.etaxonomy.cdm.api.facade.DerivedUnitFacade;
|
|
27
|
import eu.etaxonomy.cdm.api.facade.DerivedUnitFacadeNotSupportedException;
|
|
28
|
import eu.etaxonomy.cdm.ext.occurrence.gbif.GbifResponse;
|
|
29
|
import eu.etaxonomy.cdm.hibernate.HibernateProxyHelper;
|
|
30
|
import eu.etaxonomy.cdm.model.agent.Person;
|
|
31
|
import eu.etaxonomy.cdm.model.agent.Team;
|
|
32
|
import eu.etaxonomy.cdm.model.agent.TeamOrPersonBase;
|
|
33
|
import eu.etaxonomy.cdm.model.common.DefinedTermBase;
|
|
34
|
import eu.etaxonomy.cdm.model.common.Group;
|
|
35
|
import eu.etaxonomy.cdm.model.common.Marker;
|
|
36
|
import eu.etaxonomy.cdm.model.common.TermVocabulary;
|
|
37
|
import eu.etaxonomy.cdm.model.common.User;
|
|
38
|
import eu.etaxonomy.cdm.model.description.CategoricalData;
|
|
39
|
import eu.etaxonomy.cdm.model.description.Character;
|
|
40
|
import eu.etaxonomy.cdm.model.description.DescriptionBase;
|
|
41
|
import eu.etaxonomy.cdm.model.description.DescriptionElementBase;
|
|
42
|
import eu.etaxonomy.cdm.model.description.Distribution;
|
|
43
|
import eu.etaxonomy.cdm.model.description.FeatureNode;
|
|
44
|
import eu.etaxonomy.cdm.model.description.FeatureTree;
|
|
45
|
import eu.etaxonomy.cdm.model.description.PolytomousKeyNode;
|
|
46
|
import eu.etaxonomy.cdm.model.description.SpecimenDescription;
|
|
47
|
import eu.etaxonomy.cdm.model.media.Media;
|
|
48
|
import eu.etaxonomy.cdm.model.molecular.DnaSample;
|
|
49
|
import eu.etaxonomy.cdm.model.molecular.Sequence;
|
|
50
|
import eu.etaxonomy.cdm.model.molecular.SingleRead;
|
|
51
|
import eu.etaxonomy.cdm.model.name.TaxonName;
|
|
52
|
import eu.etaxonomy.cdm.model.occurrence.DerivedUnit;
|
|
53
|
import eu.etaxonomy.cdm.model.occurrence.FieldUnit;
|
|
54
|
import eu.etaxonomy.cdm.model.occurrence.MediaSpecimen;
|
|
55
|
import eu.etaxonomy.cdm.model.occurrence.SpecimenOrObservationType;
|
|
56
|
import eu.etaxonomy.cdm.model.reference.Reference;
|
|
57
|
import eu.etaxonomy.cdm.model.taxon.TaxonBase;
|
|
58
|
import eu.etaxonomy.cdm.model.taxon.TaxonRelationship;
|
|
59
|
import eu.etaxonomy.cdm.persistence.hibernate.CdmDataChangeMap;
|
|
60
|
import eu.etaxonomy.taxeditor.editor.IDistributionEditor;
|
|
61
|
import eu.etaxonomy.taxeditor.event.WorkbenchEventConstants;
|
|
62
|
import eu.etaxonomy.taxeditor.model.AbstractUtility;
|
|
63
|
import eu.etaxonomy.taxeditor.model.FeatureNodeContainer;
|
|
64
|
import eu.etaxonomy.taxeditor.model.IDerivedUnitFacadePart;
|
|
65
|
import eu.etaxonomy.taxeditor.model.MessagingUtils;
|
|
66
|
import eu.etaxonomy.taxeditor.model.PolytomousKeyRelationship;
|
|
67
|
import eu.etaxonomy.taxeditor.preference.IPreferenceKeys;
|
|
68
|
import eu.etaxonomy.taxeditor.preference.PreferencesUtil;
|
|
69
|
import eu.etaxonomy.taxeditor.store.UsageTermCollection;
|
|
70
|
import eu.etaxonomy.taxeditor.ui.element.AbstractFormSection;
|
|
71
|
import eu.etaxonomy.taxeditor.ui.element.RootElement;
|
|
72
|
import eu.etaxonomy.taxeditor.ui.section.agent.PersonDetailSection;
|
|
73
|
import eu.etaxonomy.taxeditor.ui.section.agent.TeamDetailSection;
|
|
74
|
import eu.etaxonomy.taxeditor.ui.section.agent.TeamOrPersonBaseDetailSection;
|
|
75
|
import eu.etaxonomy.taxeditor.ui.section.common.ReferencedEntityDetailSection;
|
|
76
|
import eu.etaxonomy.taxeditor.ui.section.description.DescriptionDetailSection;
|
|
77
|
import eu.etaxonomy.taxeditor.ui.section.description.DescriptionElementDetailSection;
|
|
78
|
import eu.etaxonomy.taxeditor.ui.section.description.DescriptionElementMediaSection;
|
|
79
|
import eu.etaxonomy.taxeditor.ui.section.description.DescriptionElementSourceSection;
|
|
80
|
import eu.etaxonomy.taxeditor.ui.section.description.DescriptionSourceSection;
|
|
81
|
import eu.etaxonomy.taxeditor.ui.section.description.MediaDetailsSection;
|
|
82
|
import eu.etaxonomy.taxeditor.ui.section.description.NaturalLanguageSection;
|
|
83
|
import eu.etaxonomy.taxeditor.ui.section.description.ScopeSection;
|
|
84
|
import eu.etaxonomy.taxeditor.ui.section.feature.CharacterDetailSection;
|
|
85
|
import eu.etaxonomy.taxeditor.ui.section.feature.FeatureDistributionDetailSection;
|
|
86
|
import eu.etaxonomy.taxeditor.ui.section.feature.FeatureNodeDetailSection;
|
|
87
|
import eu.etaxonomy.taxeditor.ui.section.feature.FeatureTreeDetailSection;
|
|
88
|
import eu.etaxonomy.taxeditor.ui.section.grantedAuthority.GrantedAuthorityDetailSection;
|
|
89
|
import eu.etaxonomy.taxeditor.ui.section.group.GroupDetailSection;
|
|
90
|
import eu.etaxonomy.taxeditor.ui.section.group.MemberDetailSection;
|
|
91
|
import eu.etaxonomy.taxeditor.ui.section.key.PolytomousKeyDetailSection;
|
|
92
|
import eu.etaxonomy.taxeditor.ui.section.key.PolytomousKeyNodeDetailSection;
|
|
93
|
import eu.etaxonomy.taxeditor.ui.section.name.NameRelationshipDetailSection;
|
|
94
|
import eu.etaxonomy.taxeditor.ui.section.name.NomenclaturalStatusSection;
|
|
95
|
import eu.etaxonomy.taxeditor.ui.section.name.NonViralNameDetailSection;
|
|
96
|
import eu.etaxonomy.taxeditor.ui.section.name.ProtologueSection;
|
|
97
|
import eu.etaxonomy.taxeditor.ui.section.name.TypeDesignationSection;
|
|
98
|
import eu.etaxonomy.taxeditor.ui.section.occurrence.DerivedUnitBaseDetailSection;
|
|
99
|
import eu.etaxonomy.taxeditor.ui.section.occurrence.DerivedUnitGeneralDetailSection;
|
|
100
|
import eu.etaxonomy.taxeditor.ui.section.occurrence.DeterminationDetailSection;
|
|
101
|
import eu.etaxonomy.taxeditor.ui.section.occurrence.FieldUnitDetailSection;
|
|
102
|
import eu.etaxonomy.taxeditor.ui.section.occurrence.FieldUnitGeneralDetailSection;
|
|
103
|
import eu.etaxonomy.taxeditor.ui.section.occurrence.GatheringEventDetailSection;
|
|
104
|
import eu.etaxonomy.taxeditor.ui.section.occurrence.association.DerivedUnitTypeDesignationSection;
|
|
105
|
import eu.etaxonomy.taxeditor.ui.section.occurrence.association.TaxonAssociationDetailSection;
|
|
106
|
import eu.etaxonomy.taxeditor.ui.section.occurrence.dna.DnaQualityDetailSection;
|
|
107
|
import eu.etaxonomy.taxeditor.ui.section.occurrence.dna.DnaSampleGeneralDetailSection;
|
|
108
|
import eu.etaxonomy.taxeditor.ui.section.occurrence.dna.DnaSamplePreparationPreservationSection;
|
|
109
|
import eu.etaxonomy.taxeditor.ui.section.occurrence.dna.SampleDesignationDetailSection;
|
|
110
|
import eu.etaxonomy.taxeditor.ui.section.occurrence.dna.SequenceContigFileCollectionDetailSection;
|
|
111
|
import eu.etaxonomy.taxeditor.ui.section.occurrence.dna.SequenceGeneralDetailSection;
|
|
112
|
import eu.etaxonomy.taxeditor.ui.section.occurrence.dna.SequenceReferenceCollectionDetailSection;
|
|
113
|
import eu.etaxonomy.taxeditor.ui.section.occurrence.dna.SingleReadGeneralDetailSection;
|
|
114
|
import eu.etaxonomy.taxeditor.ui.section.occurrence.dna.SingleReadPherogramCollectionDetailSection;
|
|
115
|
import eu.etaxonomy.taxeditor.ui.section.occurrence.dna.TissueSampleGeneralDetailSection;
|
|
116
|
import eu.etaxonomy.taxeditor.ui.section.occurrence.media.MediaSpecimenGeneralDetailSection;
|
|
117
|
import eu.etaxonomy.taxeditor.ui.section.reference.NomenclaturalReferenceDetailSection;
|
|
118
|
import eu.etaxonomy.taxeditor.ui.section.reference.ReferenceDetailSection;
|
|
119
|
import eu.etaxonomy.taxeditor.ui.section.supplemental.RightsSection;
|
|
120
|
import eu.etaxonomy.taxeditor.ui.section.supplemental.identifier.DerivedUnitFacadeIdentifierSection;
|
|
121
|
import eu.etaxonomy.taxeditor.ui.section.taxon.ParsingMessagesSection;
|
|
122
|
import eu.etaxonomy.taxeditor.ui.section.taxon.TaxonBaseDetailSection;
|
|
123
|
import eu.etaxonomy.taxeditor.ui.section.taxon.TaxonRelationshipDetailSection;
|
|
124
|
import eu.etaxonomy.taxeditor.ui.section.user.GroupsByUserDetailSection;
|
|
125
|
import eu.etaxonomy.taxeditor.ui.section.user.UserDetailSection;
|
|
126
|
import eu.etaxonomy.taxeditor.ui.section.userecords.UseRecordDetailSection;
|
|
127
|
import eu.etaxonomy.taxeditor.ui.section.vocabulary.TermVocabularyDetailSection;
|
|
128
|
import eu.etaxonomy.taxeditor.view.detail.DetailsViewPart;
|
|
129
|
import eu.etaxonomy.taxeditor.view.e4.AbstractCdmDataViewerE4;
|
|
130
|
|
|
131
|
/**
|
|
132
|
*
|
|
133
|
* The DetailsViewer handles the content of the details view (
|
|
134
|
* {@link DetailsViewPart}).<br>
|
|
135
|
* Depending on the type of the selected element the section of the details view
|
|
136
|
* are created.
|
|
137
|
*
|
|
138
|
* @author pplitzner
|
|
139
|
* @date 18.07.2017
|
|
140
|
*
|
|
141
|
*/
|
|
142
|
public class DetailsViewerE4 extends AbstractCdmDataViewerE4 {
|
|
143
|
|
|
144
|
private ISelection selection;
|
|
145
|
private boolean detailsEnabled = true;
|
|
146
|
|
|
147
|
public boolean isDetailsEnabled() {
|
|
148
|
return detailsEnabled;
|
|
149
|
}
|
|
150
|
|
|
151
|
public void setDetailsEnabled(boolean detailsEnabled) {
|
|
152
|
this.detailsEnabled = detailsEnabled;
|
|
153
|
}
|
|
154
|
|
|
155
|
public void setInput(Object input, Object activePart) {
|
|
156
|
if (activePart instanceof IDistributionEditor){
|
|
157
|
detailsEnabled = false;
|
|
158
|
}else{
|
|
159
|
detailsEnabled = true;
|
|
160
|
}
|
|
161
|
setInput(input);
|
|
162
|
|
|
163
|
}
|
|
164
|
// START HACK TO MAKE THE DERIVED UNIT FACADE WORK
|
|
165
|
// since we are getting implementations of DerivedUnitBase from the bulk
|
|
166
|
// editor
|
|
167
|
// and not derived unit facade objects,
|
|
168
|
|
|
169
|
@Override
|
|
170
|
public void setInput(Object input) {
|
|
171
|
|
|
172
|
if(input instanceof TreeNode){
|
|
173
|
input = ((TreeNode) input).getValue();
|
|
174
|
}
|
|
175
|
if(input instanceof GbifResponse){
|
|
176
|
input = ((GbifResponse) input).getDerivedUnitFacade();
|
|
177
|
}
|
|
178
|
if(input instanceof FeatureNode
|
|
179
|
&& HibernateProxyHelper.isInstanceOf(((FeatureNode) input).getFeature(), Character.class)){
|
|
180
|
input = HibernateProxyHelper.deproxy(((FeatureNode) input).getFeature(), Character.class);
|
|
181
|
}
|
|
182
|
if (input !=null && input.getClass().equals(DerivedUnit.class)) {
|
|
183
|
DerivedUnit derivedUnit = (DerivedUnit)input;
|
|
184
|
try {
|
|
185
|
input = DerivedUnitFacade.NewInstance(derivedUnit,
|
|
186
|
PreferencesUtil.getDerivedUnitConfigurator());
|
|
187
|
} catch (DerivedUnitFacadeNotSupportedException e) {
|
|
188
|
// MessagingUtils.error(getClass(), e); //nothing should happen, later on the Details View will show an according information that it is not possible to open this data
|
|
189
|
}
|
|
190
|
}
|
|
191
|
else if(input instanceof FieldUnit){
|
|
192
|
input = DerivedUnitFacade.NewInstance(SpecimenOrObservationType.FieldUnit, (FieldUnit) input);
|
|
193
|
}
|
|
194
|
super.setInput(input);
|
|
195
|
}
|
|
196
|
|
|
197
|
@Override
|
|
198
|
protected void markViewPartDirty() {
|
|
199
|
if (getInput() instanceof DerivedUnitFacade) {
|
|
200
|
DerivedUnitFacade facade = (DerivedUnitFacade) getInput();
|
|
201
|
if(facade.innerDerivedUnit()!=null){
|
|
202
|
part.changed(facade.innerDerivedUnit());
|
|
203
|
}
|
|
204
|
else if(facade.innerFieldUnit()!=null){
|
|
205
|
part.changed(facade.innerFieldUnit());
|
|
206
|
}
|
|
207
|
}
|
|
208
|
else{
|
|
209
|
super.markViewPartDirty();
|
|
210
|
}
|
|
211
|
}
|
|
212
|
|
|
213
|
/** {@inheritDoc} */
|
|
214
|
@Override
|
|
215
|
protected void showParts() {
|
|
216
|
// FIXME (CM) : Need to clean out this code.
|
|
217
|
// Too much type checking to decide which detail view to display.
|
|
218
|
// Need to build in a mechanism where navigators / editors are 'aware'
|
|
219
|
// of the corresponding detail viewer.
|
|
220
|
|
|
221
|
Object input = getInput();
|
|
222
|
|
|
223
|
destroySections();
|
|
224
|
if (input instanceof TaxonBase) {
|
|
225
|
if(((TaxonBase) input).getName()==null){
|
|
226
|
createEmptySection(rootElement);
|
|
227
|
}
|
|
228
|
else{
|
|
229
|
createTaxonSections(rootElement);
|
|
230
|
}
|
|
231
|
|
|
232
|
} else if (input instanceof TaxonName) {
|
|
233
|
createNameSections(rootElement);
|
|
234
|
|
|
235
|
} else if (input instanceof Reference) {
|
|
236
|
createReferenceSections(rootElement);
|
|
237
|
|
|
238
|
} else if (input instanceof Team) {
|
|
239
|
createTeamDetailSection(rootElement);
|
|
240
|
|
|
241
|
} else if (input instanceof Person) {
|
|
242
|
createPersonDetailSection(rootElement);
|
|
243
|
|
|
244
|
} else if (input instanceof TeamOrPersonBase) {
|
|
245
|
createTeamOrPersonBaseDetailSection(rootElement);
|
|
246
|
|
|
247
|
} else if (input instanceof DescriptionBase) {
|
|
248
|
if(input instanceof SpecimenDescription){
|
|
249
|
//TODO: add more sections to DetailsView for SpecimenDescription
|
|
250
|
createSpecimenDescriptionSection(rootElement);
|
|
251
|
}
|
|
252
|
else{
|
|
253
|
Set<Marker> descriptionMarkers = ((DescriptionBase<?>) input).getMarkers();
|
|
254
|
|
|
255
|
Boolean isUseDescription = false;
|
|
256
|
for (Marker marker : descriptionMarkers) {
|
|
257
|
if (marker.getMarkerType()!= null && marker.getMarkerType().getUuid().equals(UsageTermCollection.uuidUseMarkerType)) {
|
|
258
|
isUseDescription = true;
|
|
259
|
}
|
|
260
|
}
|
|
261
|
if (((DescriptionBase<?>) input).isImageGallery()) {
|
|
262
|
createImageGallerySection(rootElement);
|
|
263
|
|
|
264
|
} else if (isUseDescription) {
|
|
265
|
createUseDescriptionSection(rootElement);
|
|
266
|
} else {
|
|
267
|
createDescriptionSection(rootElement);
|
|
268
|
|
|
269
|
}
|
|
270
|
}
|
|
271
|
} else if (input instanceof DescriptionElementBase){
|
|
272
|
Set<Marker> descriptionMarkers = new HashSet<>();
|
|
273
|
if(((DescriptionElementBase) input).getInDescription()!=null) {
|
|
274
|
descriptionMarkers = ((DescriptionElementBase) input).getInDescription().getMarkers();
|
|
275
|
}
|
|
276
|
|
|
277
|
Boolean isUseDescription = false;
|
|
278
|
for (Marker marker : descriptionMarkers) {
|
|
279
|
if (marker.getMarkerType()!= null && marker.getMarkerType().getUuid().equals(UsageTermCollection.uuidUseMarkerType)) {
|
|
280
|
isUseDescription = true;
|
|
281
|
}
|
|
282
|
}
|
|
283
|
|
|
284
|
if (isUseDescription == true && input instanceof CategoricalData) {
|
|
285
|
createUseRecordSection(rootElement);
|
|
286
|
} else {
|
|
287
|
createDescriptionElementSection(rootElement);
|
|
288
|
}
|
|
289
|
|
|
290
|
} else if (input instanceof Media) {
|
|
291
|
createMediaElementSection(rootElement);
|
|
292
|
|
|
293
|
} else if (input instanceof DerivedUnitFacade) {
|
|
294
|
if(((DerivedUnitFacade) input).getType()==SpecimenOrObservationType.FieldUnit){
|
|
295
|
if(((DerivedUnitFacade) input).innerFieldUnit()==null){
|
|
296
|
MessagingUtils.error(DetailsViewerE4.class, "FieldUnit of facade is null", null);
|
|
297
|
}
|
|
298
|
else{
|
|
299
|
createFieldUnitSection(rootElement);
|
|
300
|
}
|
|
301
|
}
|
|
302
|
else if(((DerivedUnitFacade) input).getType()==SpecimenOrObservationType.PreservedSpecimen){
|
|
303
|
if(((DerivedUnitFacade) input).innerDerivedUnit()==null){
|
|
304
|
MessagingUtils.error(DetailsViewerE4.class, "DerivedUnit of facade is null", null);
|
|
305
|
}
|
|
306
|
else{
|
|
307
|
createDerivedUnitBaseElementSection(rootElement);
|
|
308
|
}
|
|
309
|
}
|
|
310
|
else if(((DerivedUnitFacade) input).getType()==SpecimenOrObservationType.TissueSample){
|
|
311
|
//TissueSample should only be created by using it's own class
|
|
312
|
//in future using only one class with different SpecimenOrObservationTypes is desired
|
|
313
|
createTissueSampleSection(rootElement);
|
|
314
|
}
|
|
315
|
else{
|
|
316
|
createDerivedUnitBaseElementSection(rootElement);
|
|
317
|
}
|
|
318
|
} else if (input instanceof DnaSample){
|
|
319
|
DnaSample dnaSample = (DnaSample)input;
|
|
320
|
if(dnaSample.getRecordBasis()==SpecimenOrObservationType.TissueSample){
|
|
321
|
createTissueSampleSection(rootElement);
|
|
322
|
}
|
|
323
|
else if(dnaSample.getRecordBasis()==SpecimenOrObservationType.DnaSample){
|
|
324
|
createDnaSampleSection(rootElement);
|
|
325
|
}
|
|
326
|
} else if (input instanceof MediaSpecimen){
|
|
327
|
createMediaSpecimenSection(rootElement);
|
|
328
|
}
|
|
329
|
else if(input instanceof Sequence){
|
|
330
|
createSequenceSection(rootElement);
|
|
331
|
}
|
|
332
|
else if(input instanceof SingleRead){
|
|
333
|
createSingleReadSection(rootElement);
|
|
334
|
}
|
|
335
|
else if (input instanceof FeatureNodeContainer) {
|
|
336
|
createFeatureDistributionSection(rootElement);
|
|
337
|
|
|
338
|
} else if (input instanceof FeatureNode) {
|
|
339
|
createFeatureNodeSection(rootElement);
|
|
340
|
|
|
341
|
} else if (input instanceof FeatureTree) {
|
|
342
|
createFeatureTreeSection(rootElement);
|
|
343
|
|
|
344
|
} else if (input instanceof Character) {
|
|
345
|
createCharacterSection(rootElement);
|
|
346
|
|
|
347
|
}else if ((input instanceof PolytomousKeyNode) || (input instanceof PolytomousKeyRelationship)) {
|
|
348
|
createPolytomousKeyNodeSection(rootElement);
|
|
349
|
} else if (input instanceof User) {
|
|
350
|
createUserSection(rootElement);
|
|
351
|
} else if (input instanceof Group) {
|
|
352
|
createGroupSection(rootElement);
|
|
353
|
} else if (input instanceof TaxonRelationship && ((TaxonRelationship)input).getType()!=null
|
|
354
|
&& ((TaxonRelationship)input).getType().isAnyMisappliedName()) {
|
|
355
|
createMisappliedNameSection(rootElement);
|
|
356
|
}else if (input instanceof TaxonRelationship ) {
|
|
357
|
createTaxonRelationshipSection(rootElement);
|
|
358
|
} else if (input instanceof TermVocabulary) {
|
|
359
|
createTermVocabularySection(rootElement);
|
|
360
|
} else if (input instanceof DefinedTermBase) {
|
|
361
|
createDefinedTermSection(rootElement);
|
|
362
|
|
|
363
|
} else if (input instanceof SelectionChangedEvent ) {
|
|
364
|
IStructuredSelection sel =(IStructuredSelection) ((SelectionChangedEvent)input).getSelection();
|
|
365
|
if (sel.getFirstElement()instanceof Distribution){
|
|
366
|
createDescriptionElementSection(rootElement);
|
|
367
|
}
|
|
368
|
|
|
369
|
// createDescriptionElementSection(rootElement);
|
|
370
|
|
|
371
|
}else {
|
|
372
|
createEmptySection(rootElement);
|
|
373
|
}
|
|
374
|
layout();
|
|
375
|
|
|
376
|
}
|
|
377
|
|
|
378
|
private void createGroupSection(RootElement parent) {
|
|
379
|
destroySections();
|
|
380
|
|
|
381
|
GroupDetailSection groupDetailSection = formFactory.createGroupDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE| ExpandableComposite.EXPANDED);
|
|
382
|
MemberDetailSection memberDetailSection = formFactory.createMemberDetailSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
|
|
383
|
GrantedAuthorityDetailSection grantedAuthorityDetailSection = formFactory.createGrantedAuthorityDetailSection(getConversationHolder(), parent,ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
|
|
384
|
|
|
385
|
addPart(groupDetailSection);
|
|
386
|
addPart(memberDetailSection);
|
|
387
|
addPart(grantedAuthorityDetailSection);
|
|
388
|
}
|
|
389
|
|
|
390
|
/** {@inheritDoc} */
|
|
391
|
@Override
|
|
392
|
public ISelection getSelection() {
|
|
393
|
return selection;
|
|
394
|
}
|
|
395
|
|
|
396
|
/** {@inheritDoc} */
|
|
397
|
@Override
|
|
398
|
public void setSelection(ISelection selection, boolean reveal) {
|
|
399
|
|
|
400
|
this.selection = selection;
|
|
401
|
|
|
402
|
if(this.selection!=null){
|
|
403
|
SelectionChangedEvent selectionChangedEvent = new SelectionChangedEvent(this, selection);
|
|
404
|
fireSelectionChanged(selectionChangedEvent);
|
|
405
|
}
|
|
406
|
|
|
407
|
}
|
|
408
|
|
|
409
|
private void createTaxonSections(RootElement parent) {
|
|
410
|
destroySections();
|
|
411
|
|
|
412
|
ParsingMessagesSection parsingMessagesSection = formFactory.createParsingMessagesSection(getConversationHolder(), parent, this,
|
|
413
|
ExpandableComposite.EXPANDED | ExpandableComposite.EXPANDED);
|
|
414
|
if (!PreferencesUtil.getPreferenceStore().getBoolean(IPreferenceKeys.SHOW_SIMPLE_NAME_DETAILS_SECTION)){
|
|
415
|
TaxonBaseDetailSection taxonBaseDetailSection = formFactory.createTaxonBaseDetailSection(getConversationHolder(), parent, this,
|
|
416
|
ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
|
|
417
|
formFactory.createHorizontalSeparator(parent, SWT.BORDER);
|
|
418
|
addPart(taxonBaseDetailSection);
|
|
419
|
}else{
|
|
420
|
if (PreferencesUtil.getPreferenceStore().getBoolean(IPreferenceKeys.SHOW_SIMPLE_NAME_DETAILS_TAXON)){
|
|
421
|
TaxonBaseDetailSection taxonBaseDetailSection = formFactory.createTaxonBaseDetailSection(getConversationHolder(), parent, this,
|
|
422
|
ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
|
|
423
|
formFactory.createHorizontalSeparator(parent, SWT.BORDER);
|
|
424
|
|
|
425
|
addPart(taxonBaseDetailSection);
|
|
426
|
}
|
|
427
|
}
|
|
428
|
NonViralNameDetailSection nonViralNameSection = formFactory
|
|
429
|
.createNonViralNameDetailSection(getConversationHolder(), parent, this, true,
|
|
430
|
ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
|
|
431
|
formFactory.createHorizontalSeparator(parent, SWT.BORDER);
|
|
432
|
if (!PreferencesUtil.getPreferenceStore().getBoolean(IPreferenceKeys.SHOW_SIMPLE_NAME_DETAILS_SECTION) || (PreferencesUtil.getPreferenceStore().getBoolean(IPreferenceKeys.SHOW_SIMPLE_NAME_DETAILS_SECTION) && PreferencesUtil.getPreferenceStore().getBoolean(IPreferenceKeys.SHOW_NAME_DETAILS_SECTION_NOMENCLATURAL_REFERENCE))){
|
|
433
|
NomenclaturalReferenceDetailSection referenceDetailSection = formFactory.createNomenclaturalReferenceDetailSection(getConversationHolder(), parent, this,
|
|
434
|
ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
|
|
435
|
formFactory.createHorizontalSeparator(parent, SWT.BORDER);
|
|
436
|
addPart(referenceDetailSection);
|
|
437
|
|
|
438
|
}
|
|
439
|
if ( !PreferencesUtil.getPreferenceStore().getBoolean(IPreferenceKeys.SHOW_SIMPLE_NAME_DETAILS_SECTION) || (PreferencesUtil.getPreferenceStore().getBoolean(IPreferenceKeys.SHOW_SIMPLE_NAME_DETAILS_SECTION) && PreferencesUtil.getPreferenceStore().getBoolean(IPreferenceKeys.SHOW_NAME_DETAILS_SECTION_NOMENCLATURAL_STATUS))){
|
|
440
|
NomenclaturalStatusSection nomenclaturalStatusSection = formFactory.createNomenclaturalStatusSection(getConversationHolder(), parent,
|
|
441
|
ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
|
|
442
|
formFactory.createHorizontalSeparator(parent, SWT.BORDER);
|
|
443
|
addPart(nomenclaturalStatusSection);
|
|
444
|
}
|
|
445
|
|
|
446
|
if (!PreferencesUtil.getPreferenceStore().getBoolean(IPreferenceKeys.SHOW_SIMPLE_NAME_DETAILS_SECTION) || (PreferencesUtil.getPreferenceStore().getBoolean(IPreferenceKeys.SHOW_SIMPLE_NAME_DETAILS_SECTION) && PreferencesUtil.getPreferenceStore().getBoolean(IPreferenceKeys.SHOW_NAME_DETAILS_SECTION_PROTOLOGUE))){
|
|
447
|
ProtologueSection protologSection = formFactory.createProtologueSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE);
|
|
448
|
formFactory.createHorizontalSeparator(parent, SWT.BORDER);
|
|
449
|
addPart(protologSection);
|
|
450
|
}
|
|
451
|
|
|
452
|
if (!PreferencesUtil.getPreferenceStore().getBoolean(IPreferenceKeys.SHOW_SIMPLE_NAME_DETAILS_SECTION) || (PreferencesUtil.getPreferenceStore().getBoolean(IPreferenceKeys.SHOW_SIMPLE_NAME_DETAILS_SECTION) && PreferencesUtil.getPreferenceStore().getBoolean(IPreferenceKeys.SHOW_NAME_DETAILS_SECTION_TYPE_DESIGNATION))){
|
|
453
|
TypeDesignationSection typeDesignationSection = formFactory.createTypeDesignationSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE);
|
|
454
|
formFactory.createHorizontalSeparator(parent, SWT.BORDER);
|
|
455
|
addPart(typeDesignationSection);
|
|
456
|
}
|
|
457
|
|
|
458
|
if (!PreferencesUtil.getPreferenceStore().getBoolean(IPreferenceKeys.SHOW_SIMPLE_NAME_DETAILS_SECTION) || (PreferencesUtil.getPreferenceStore().getBoolean(IPreferenceKeys.SHOW_SIMPLE_NAME_DETAILS_SECTION) && PreferencesUtil.getPreferenceStore().getBoolean(IPreferenceKeys.SHOW_NAME_DETAILS_SECTION_NAME_RELATIONSHIP))){
|
|
459
|
NameRelationshipDetailSection nameRelationshipSection = formFactory.createNameRelationshipDetailSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE);
|
|
460
|
formFactory.createHorizontalSeparator(parent, SWT.BORDER);
|
|
461
|
addPart(nameRelationshipSection);
|
|
462
|
}
|
|
463
|
|
|
464
|
|
|
465
|
addPart(parsingMessagesSection);
|
|
466
|
|
|
467
|
addPart(nonViralNameSection);
|
|
468
|
|
|
469
|
}
|
|
470
|
|
|
471
|
private void createNameSections(RootElement parent) {
|
|
472
|
destroySections();
|
|
473
|
NonViralNameDetailSection nonViralNameSection = formFactory.createNonViralNameDetailSection(
|
|
474
|
getConversationHolder(), parent, this, false, ExpandableComposite.TWISTIE
|
|
475
|
| ExpandableComposite.EXPANDED);
|
|
476
|
|
|
477
|
formFactory.createHorizontalSeparator(parent, SWT.BORDER);
|
|
478
|
|
|
479
|
NomenclaturalReferenceDetailSection referenceDetailSection = formFactory.createNomenclaturalReferenceDetailSection(getConversationHolder(), parent, this,
|
|
480
|
ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
|
|
481
|
formFactory.createHorizontalSeparator(parent, SWT.BORDER);
|
|
482
|
|
|
483
|
NomenclaturalStatusSection nomenclaturalStatusSection = formFactory.createNomenclaturalStatusSection(getConversationHolder(), parent,
|
|
484
|
ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
|
|
485
|
formFactory.createHorizontalSeparator(parent, SWT.BORDER);
|
|
486
|
|
|
487
|
addPart(nonViralNameSection);
|
|
488
|
addPart(nomenclaturalStatusSection);
|
|
489
|
addPart(referenceDetailSection);
|
|
490
|
|
|
491
|
ProtologueSection protologSection = formFactory.createProtologueSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE);
|
|
492
|
formFactory.createHorizontalSeparator(parent, SWT.BORDER);
|
|
493
|
|
|
494
|
TypeDesignationSection typeDesignationSection = formFactory.createTypeDesignationSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE);
|
|
495
|
formFactory.createHorizontalSeparator(parent, SWT.BORDER);
|
|
496
|
|
|
497
|
NameRelationshipDetailSection nameRelationshipSection = formFactory.createNameRelationshipDetailSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE);
|
|
498
|
formFactory.createHorizontalSeparator(parent, SWT.BORDER);
|
|
499
|
addPart(protologSection);
|
|
500
|
addPart(typeDesignationSection);
|
|
501
|
addPart(nameRelationshipSection);
|
|
502
|
|
|
503
|
}
|
|
504
|
|
|
505
|
private void createReferenceSections(RootElement parent) {
|
|
506
|
destroySections();
|
|
507
|
|
|
508
|
ReferenceDetailSection referenceDetailSection = formFactory.createReferenceDetailSection(getConversationHolder(), parent, this,
|
|
509
|
ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
|
|
510
|
|
|
511
|
addPart(referenceDetailSection);
|
|
512
|
}
|
|
513
|
|
|
514
|
private void createTeamOrPersonBaseDetailSection(RootElement parent) {
|
|
515
|
destroySections();
|
|
516
|
TeamOrPersonBaseDetailSection teamOrPersonBaseDetailSection = formFactory.createTeamOrPersonBaseDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
|
|
517
|
|
|
518
|
addPart(teamOrPersonBaseDetailSection);
|
|
519
|
}
|
|
520
|
|
|
521
|
private void createTeamDetailSection(RootElement parent) {
|
|
522
|
destroySections();
|
|
523
|
TeamDetailSection teamDetailSection = formFactory.createTeamDetailSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
|
|
524
|
|
|
525
|
addPart(teamDetailSection);
|
|
526
|
}
|
|
527
|
|
|
528
|
private void createPersonDetailSection(RootElement parent) {
|
|
529
|
destroySections();
|
|
530
|
PersonDetailSection personDetailSection = formFactory.createPersonDetailSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
|
|
531
|
addPart(personDetailSection);
|
|
532
|
}
|
|
533
|
|
|
534
|
private void createDescriptionElementSection(RootElement parent) {
|
|
535
|
|
|
536
|
destroySections();
|
|
537
|
DescriptionElementDetailSection descriptionElementDetailSection = formFactory.createDescriptionElementDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
|
|
538
|
descriptionElementDetailSection.setEnabled(this.detailsEnabled);
|
|
539
|
|
|
540
|
// IntextReferenceSection intextReferenceSection = formFactory.createIntextReferenceSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE);
|
|
541
|
|
|
542
|
formFactory.createHorizontalSeparator(parent, SWT.BORDER);
|
|
543
|
|
|
544
|
DescriptionElementSourceSection descriptionElementSourceSection = formFactory.createDescriptionElementSourceSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE);
|
|
545
|
|
|
546
|
formFactory.createHorizontalSeparator(parent, SWT.BORDER);
|
|
547
|
|
|
548
|
DescriptionElementMediaSection descriptionElementMediaSection = formFactory.createDescriptionElementMediaSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE);
|
|
549
|
|
|
550
|
formFactory.createHorizontalSeparator(parent, SWT.BORDER);
|
|
551
|
|
|
552
|
addPart(descriptionElementDetailSection);
|
|
553
|
addPart(descriptionElementSourceSection);
|
|
554
|
addPart(descriptionElementMediaSection);
|
|
555
|
}
|
|
556
|
|
|
557
|
private void createDescriptionSection(RootElement parent) {
|
|
558
|
destroySections();
|
|
559
|
DescriptionDetailSection descriptionDetailSection = formFactory.createDescriptionDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
|
|
560
|
|
|
561
|
formFactory.createHorizontalSeparator(parent, SWT.BORDER);
|
|
562
|
|
|
563
|
NaturalLanguageSection naturalLanguageSection = formFactory.createNaturalLanguageSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
|
|
564
|
|
|
565
|
formFactory.createHorizontalSeparator(parent, SWT.BORDER);
|
|
566
|
|
|
567
|
// DescribedSpecimenSection describedSpecimenSection = formFactory.createDescribedSpecimenSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE);
|
|
568
|
//
|
|
569
|
// formFactory.createHorizontalSeparator(parent, SWT.BORDER);
|
|
570
|
|
|
571
|
// DescriptionSourceSection descriptionSourceSection = (DescriptionSourceSection) formFactory
|
|
572
|
// .createEntityDetailSection(EntityDetailType.DESCRIPTIONSOURCE,
|
|
573
|
// getConversationHolder(), parent, Section.TWISTIE);
|
|
574
|
//
|
|
575
|
// formFactory.createHorizontalSeparator(parent, SWT.BORDER);
|
|
576
|
|
|
577
|
ScopeSection scopeSection = formFactory.createScopeSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE);
|
|
578
|
|
|
579
|
formFactory.createHorizontalSeparator(parent, SWT.BORDER);
|
|
580
|
|
|
581
|
addPart(descriptionDetailSection);
|
|
582
|
addPart(naturalLanguageSection);
|
|
583
|
// addPart(describedSpecimenSection);
|
|
584
|
// addPart(descriptionSourceSection);
|
|
585
|
addPart(scopeSection);
|
|
586
|
}
|
|
587
|
|
|
588
|
private void createSpecimenDescriptionSection(RootElement parent) {
|
|
589
|
destroySections();
|
|
590
|
DescriptionDetailSection descriptionDetailSection = formFactory.createDescriptionDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
|
|
591
|
addPart(descriptionDetailSection);
|
|
592
|
}
|
|
593
|
|
|
594
|
private void createUseDescriptionSection(RootElement parent) {
|
|
595
|
destroySections();
|
|
596
|
DescriptionDetailSection descriptionDetailSection = formFactory.createDescriptionDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
|
|
597
|
|
|
598
|
formFactory.createHorizontalSeparator(parent, SWT.BORDER);
|
|
599
|
|
|
600
|
DescriptionSourceSection descriptionSourceSection = formFactory.createDescriptionSourceSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
|
|
601
|
|
|
602
|
formFactory.createHorizontalSeparator(parent, SWT.BORDER);
|
|
603
|
|
|
604
|
addPart(descriptionDetailSection);
|
|
605
|
addPart(descriptionSourceSection);
|
|
606
|
|
|
607
|
}
|
|
608
|
|
|
609
|
private void createImageGallerySection(RootElement parent) {
|
|
610
|
destroySections();
|
|
611
|
DescriptionDetailSection descriptionDetailSection = formFactory.createDescriptionDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
|
|
612
|
|
|
613
|
addPart(descriptionDetailSection);
|
|
614
|
}
|
|
615
|
|
|
616
|
private void createMediaElementSection(RootElement parent) {
|
|
617
|
destroySections();
|
|
618
|
|
|
619
|
MediaDetailsSection mediaDetailSection = formFactory.createMediaDetailsSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
|
|
620
|
|
|
621
|
addPart(mediaDetailSection);
|
|
622
|
}
|
|
623
|
|
|
624
|
private void createDerivedUnitBaseElementSection(RootElement parent) {
|
|
625
|
destroySections();
|
|
626
|
|
|
627
|
DerivedUnitGeneralDetailSection derivedUnitGeneralDetailSection = formFactory.createDerivedUnitGeneralDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
|
|
628
|
//TODO for DerivateEditor do not use facade anymore to avoid this special case handling #4539
|
|
629
|
if(!(AbstractUtility.getActivePart() instanceof IDerivedUnitFacadePart)){
|
|
630
|
derivedUnitGeneralDetailSection.setShowOnlyDerivedUnitData(true);
|
|
631
|
}
|
|
632
|
addPart(derivedUnitGeneralDetailSection);
|
|
633
|
|
|
634
|
formFactory.createHorizontalSeparator(parent, SWT.BORDER);
|
|
635
|
|
|
636
|
DerivedUnitBaseDetailSection derivedUnitBaseDetailSection = formFactory.createDerivedUnitBaseDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
|
|
637
|
addPart(derivedUnitBaseDetailSection);
|
|
638
|
|
|
639
|
//for editors working with facades
|
|
640
|
if(AbstractUtility.getActivePart() instanceof IDerivedUnitFacadePart){
|
|
641
|
formFactory.createHorizontalSeparator(parent, SWT.BORDER);
|
|
642
|
GatheringEventDetailSection gatheringEventDetailSection = formFactory.createGatheringEventDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE);
|
|
643
|
addPart(gatheringEventDetailSection);
|
|
644
|
|
|
645
|
formFactory.createHorizontalSeparator(parent, SWT.BORDER);
|
|
646
|
FieldUnitDetailSection fieldUnitDetailSection = formFactory.createFieldUnitDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE);
|
|
647
|
addPart(fieldUnitDetailSection);
|
|
648
|
}
|
|
649
|
else{
|
|
650
|
|
|
651
|
if(PreferencesUtil.isShowTaxonAssociations()){
|
|
652
|
formFactory.createHorizontalSeparator(parent, SWT.BORDER);
|
|
653
|
TaxonAssociationDetailSection taxonAssociationDetailSection = formFactory.createTaxonAssociationDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
|
|
654
|
addPart(taxonAssociationDetailSection);
|
|
655
|
}
|
|
656
|
formFactory.createHorizontalSeparator(parent, SWT.BORDER);
|
|
657
|
DerivedUnitFacadeIdentifierSection identifierDetailSection = formFactory.createDerivedUnitFacadeIdentifierSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE);
|
|
658
|
addPart(identifierDetailSection);
|
|
659
|
}
|
|
660
|
if(!PreferencesUtil.isDeterminationOnlyForFieldUnits()){
|
|
661
|
formFactory.createHorizontalSeparator(parent, SWT.BORDER);
|
|
662
|
DeterminationDetailSection determinationDetailSection = formFactory.createDeterminationDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE);
|
|
663
|
addPart(determinationDetailSection);
|
|
664
|
}
|
|
665
|
|
|
666
|
formFactory.createHorizontalSeparator(parent, SWT.BORDER);
|
|
667
|
DerivedUnitTypeDesignationSection derivedUnitTypeDesignationSection = formFactory.createDerivedUnitTypeDesignationSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE);
|
|
668
|
addPart(derivedUnitTypeDesignationSection);
|
|
669
|
|
|
670
|
}
|
|
671
|
|
|
672
|
private void createFieldUnitSection(RootElement parent) {
|
|
673
|
destroySections();
|
|
674
|
|
|
675
|
FieldUnitGeneralDetailSection fielUnitGeneralDetailSection = formFactory.createFieldUnitGeneralDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
|
|
676
|
|
|
677
|
formFactory.createHorizontalSeparator(parent, SWT.BORDER);
|
|
678
|
|
|
679
|
GatheringEventDetailSection gatheringEventDetailSection = formFactory.createGatheringEventDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE);
|
|
680
|
|
|
681
|
formFactory.createHorizontalSeparator(parent, SWT.BORDER);
|
|
682
|
|
|
683
|
FieldUnitDetailSection fieldUnitDetailSection = formFactory.createFieldUnitDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE);
|
|
684
|
|
|
685
|
addPart(fielUnitGeneralDetailSection);
|
|
686
|
addPart(gatheringEventDetailSection);
|
|
687
|
addPart(fieldUnitDetailSection);
|
|
688
|
|
|
689
|
if(PreferencesUtil.isDeterminationOnlyForFieldUnits()){
|
|
690
|
formFactory.createHorizontalSeparator(parent, SWT.BORDER);
|
|
691
|
DeterminationDetailSection determinationDetailSection = formFactory.createDeterminationDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE);
|
|
692
|
addPart(determinationDetailSection);
|
|
693
|
}
|
|
694
|
}
|
|
695
|
|
|
696
|
private void createTissueSampleSection(RootElement parent) {
|
|
697
|
destroySections();
|
|
698
|
|
|
699
|
TissueSampleGeneralDetailSection section = formFactory.createTissueSampleGeneralDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
|
|
700
|
|
|
701
|
formFactory.createHorizontalSeparator(parent, SWT.BORDER);
|
|
702
|
|
|
703
|
SampleDesignationDetailSection sampleDesignationDetailSection = formFactory.createSampleDesignationDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
|
|
704
|
|
|
705
|
addPart(section);
|
|
706
|
addPart(sampleDesignationDetailSection);
|
|
707
|
}
|
|
708
|
|
|
709
|
private void createDnaSampleSection(RootElement parent) {
|
|
710
|
destroySections();
|
|
711
|
|
|
712
|
DnaSampleGeneralDetailSection section = formFactory.createDnaSampleGeneralDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
|
|
713
|
|
|
714
|
formFactory.createHorizontalSeparator(parent, SWT.BORDER);
|
|
715
|
|
|
716
|
DnaSamplePreparationPreservationSection preparationPreservationSection = formFactory.createDnaSamplePreparationPreservationSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
|
|
717
|
|
|
718
|
formFactory.createHorizontalSeparator(parent, SWT.BORDER);
|
|
719
|
|
|
720
|
DnaQualityDetailSection qualitySection = formFactory.createDnaQualityDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
|
|
721
|
|
|
722
|
formFactory.createHorizontalSeparator(parent, SWT.BORDER);
|
|
723
|
|
|
724
|
SampleDesignationDetailSection sampleDesignationDetailSection = formFactory.createSampleDesignationDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
|
|
725
|
|
|
726
|
addPart(section);
|
|
727
|
addPart(preparationPreservationSection);
|
|
728
|
addPart(qualitySection);
|
|
729
|
addPart(sampleDesignationDetailSection);
|
|
730
|
}
|
|
731
|
|
|
732
|
private void createSequenceSection(RootElement parent) {
|
|
733
|
destroySections();
|
|
734
|
|
|
735
|
SequenceGeneralDetailSection section = formFactory.createSequenceGeneralDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
|
|
736
|
|
|
737
|
formFactory.createHorizontalSeparator(parent, SWT.BORDER);
|
|
738
|
|
|
739
|
SequenceReferenceCollectionDetailSection referenceSection = formFactory.createSequenceReferenceCollectionDetailSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
|
|
740
|
|
|
741
|
formFactory.createHorizontalSeparator(parent, SWT.BORDER);
|
|
742
|
|
|
743
|
SequenceContigFileCollectionDetailSection contigFileSection = formFactory.createSequenceContigFileCollectionDetailSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
|
|
744
|
|
|
745
|
|
|
746
|
addPart(section);
|
|
747
|
addPart(referenceSection);
|
|
748
|
addPart(contigFileSection);
|
|
749
|
}
|
|
750
|
|
|
751
|
private void createSingleReadSection(RootElement parent) {
|
|
752
|
destroySections();
|
|
753
|
|
|
754
|
SingleReadGeneralDetailSection section = formFactory.createSingleReadGeneralDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
|
|
755
|
addPart(section);
|
|
756
|
|
|
757
|
formFactory.createHorizontalSeparator(parent, SWT.BORDER);
|
|
758
|
|
|
759
|
SingleReadPherogramCollectionDetailSection pherogramSection = formFactory.createSingleReadPherogramCollectionDetailSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
|
|
760
|
addPart(pherogramSection);
|
|
761
|
|
|
762
|
}
|
|
763
|
|
|
764
|
private void createMediaSpecimenSection(RootElement parent) {
|
|
765
|
destroySections();
|
|
766
|
|
|
767
|
MediaSpecimenGeneralDetailSection generalSection = formFactory.createMediaSpecimenGeneralDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
|
|
768
|
addPart(generalSection);
|
|
769
|
|
|
770
|
formFactory.createHorizontalSeparator(parent, SWT.BORDER);
|
|
771
|
|
|
772
|
RightsSection rightsSection = formFactory.createRightsSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE);
|
|
773
|
addPart(rightsSection);
|
|
774
|
|
|
775
|
}
|
|
776
|
|
|
777
|
private void createFeatureTreeSection(RootElement parent) {
|
|
778
|
destroySections();
|
|
779
|
|
|
780
|
FeatureTreeDetailSection section = formFactory.createFeatureTreeDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
|
|
781
|
|
|
782
|
addPart(section);
|
|
783
|
}
|
|
784
|
|
|
785
|
private void createFeatureNodeSection(RootElement parent) {
|
|
786
|
destroySections();
|
|
787
|
|
|
788
|
FeatureNodeDetailSection featureDistributionSection = formFactory.createFeatureNodeDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
|
|
789
|
|
|
790
|
addPart(featureDistributionSection);
|
|
791
|
}
|
|
792
|
|
|
793
|
private void createFeatureDistributionSection(RootElement parent) {
|
|
794
|
destroySections();
|
|
795
|
|
|
796
|
FeatureDistributionDetailSection featureDistributionSection = formFactory.createFeatureDistributionDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
|
|
797
|
|
|
798
|
addPart(featureDistributionSection);
|
|
799
|
}
|
|
800
|
|
|
801
|
private void createCharacterSection(RootElement parent) {
|
|
802
|
destroySections();
|
|
803
|
|
|
804
|
CharacterDetailSection featureDistributionSection = formFactory.createCharacterDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
|
|
805
|
|
|
806
|
addPart(featureDistributionSection);
|
|
807
|
}
|
|
808
|
|
|
809
|
private void createPolytomousKeyNodeSection(RootElement parent) {
|
|
810
|
destroySections();
|
|
811
|
|
|
812
|
PolytomousKeyDetailSection polytomousKeyDetailSection = formFactory.createPolytomousKeyDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE);
|
|
813
|
|
|
814
|
formFactory.createHorizontalSeparator(parent, SWT.BORDER);
|
|
815
|
|
|
816
|
PolytomousKeyNodeDetailSection polytomousKeyNodeDetailSection = formFactory.createPolytomousKeyNodeDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
|
|
817
|
|
|
818
|
addPart(polytomousKeyDetailSection);
|
|
819
|
addPart(polytomousKeyNodeDetailSection);
|
|
820
|
|
|
821
|
}
|
|
822
|
|
|
823
|
private void createUseRecordSection(RootElement parent) {
|
|
824
|
destroySections();
|
|
825
|
|
|
826
|
UseRecordDetailSection descriptionUseRecordSection = formFactory.createUseRecordDetailSection(getConversationHolder(), parent, this,ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
|
|
827
|
|
|
828
|
formFactory.createHorizontalSeparator(parent, SWT.BORDER);
|
|
829
|
|
|
830
|
addPart(descriptionUseRecordSection);
|
|
831
|
|
|
832
|
|
|
833
|
}
|
|
834
|
|
|
835
|
private void createUserSection(RootElement parent) {
|
|
836
|
destroySections();
|
|
837
|
|
|
838
|
UserDetailSection userDetailSection = formFactory.createUserDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
|
|
839
|
|
|
840
|
GroupsByUserDetailSection groupByUserDetailSection = formFactory.createGroupsByUserDetailSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
|
|
841
|
|
|
842
|
addPart(userDetailSection);
|
|
843
|
addPart(groupByUserDetailSection);
|
|
844
|
}
|
|
845
|
|
|
846
|
private void createMisappliedNameSection(RootElement parent) {
|
|
847
|
destroySections();
|
|
848
|
|
|
849
|
TaxonRelationshipDetailSection taxonRelationshipDetailSection = formFactory.createTaxonRelationshipDetailSection(getConversationHolder(), parent, this,
|
|
850
|
ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
|
|
851
|
addPart(taxonRelationshipDetailSection);
|
|
852
|
|
|
853
|
formFactory.createHorizontalSeparator(parent, SWT.BORDER);
|
|
854
|
|
|
855
|
|
|
856
|
NonViralNameDetailSection nonViralNameSection = formFactory
|
|
857
|
.createNonViralNameDetailSection(getConversationHolder(), parent, this, true,
|
|
858
|
ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
|
|
859
|
addPart(nonViralNameSection);
|
|
860
|
|
|
861
|
formFactory.createHorizontalSeparator(parent, SWT.BORDER);
|
|
862
|
|
|
863
|
NomenclaturalReferenceDetailSection referenceDetailSection = formFactory.createNomenclaturalReferenceDetailSection(getConversationHolder(), parent, this,
|
|
864
|
ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
|
|
865
|
formFactory.createHorizontalSeparator(parent, SWT.BORDER);
|
|
866
|
addPart(referenceDetailSection);
|
|
867
|
|
|
868
|
|
|
869
|
NomenclaturalStatusSection nomenclaturalStatusSection = formFactory.createNomenclaturalStatusSection(getConversationHolder(), parent,
|
|
870
|
ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
|
|
871
|
formFactory.createHorizontalSeparator(parent, SWT.BORDER);
|
|
872
|
addPart(nomenclaturalStatusSection);
|
|
873
|
|
|
874
|
ProtologueSection protologSection = formFactory.createProtologueSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE);
|
|
875
|
formFactory.createHorizontalSeparator(parent, SWT.BORDER);
|
|
876
|
addPart(protologSection);
|
|
877
|
|
|
878
|
TypeDesignationSection typeDesignationSection = formFactory.createTypeDesignationSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE);
|
|
879
|
formFactory.createHorizontalSeparator(parent, SWT.BORDER);
|
|
880
|
addPart(typeDesignationSection);
|
|
881
|
|
|
882
|
NameRelationshipDetailSection nameRelationshipSection = formFactory.createNameRelationshipDetailSection(getConversationHolder(), parent, ExpandableComposite.TWISTIE);
|
|
883
|
formFactory.createHorizontalSeparator(parent, SWT.BORDER);
|
|
884
|
addPart(nameRelationshipSection);
|
|
885
|
|
|
886
|
}
|
|
887
|
|
|
888
|
private void createTaxonRelationshipSection(RootElement parent) {
|
|
889
|
destroySections();
|
|
890
|
|
|
891
|
TaxonRelationshipDetailSection taxonRelationshipDetailSection = formFactory.createTaxonRelationshipDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
|
|
892
|
|
|
893
|
ReferencedEntityDetailSection referencedEntityBaseDetailSection = formFactory.createReferencedEntityDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
|
|
894
|
addPart(taxonRelationshipDetailSection);
|
|
895
|
addPart(referencedEntityBaseDetailSection);
|
|
896
|
}
|
|
897
|
private void createTermVocabularySection(RootElement parent) {
|
|
898
|
destroySections();
|
|
899
|
|
|
900
|
TermVocabularyDetailSection termVocabularyDetailSection = formFactory.createTermVocabularyDetailSection(getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
|
|
901
|
addPart(termVocabularyDetailSection);
|
|
902
|
}
|
|
903
|
|
|
904
|
private void createDefinedTermSection(RootElement parent) {
|
|
905
|
destroySections();
|
|
906
|
|
|
907
|
AbstractFormSection<?> definedTermDetailSection = formFactory.createDefinedTermDetailSection(getInput().getClass(), getConversationHolder(), parent, this, ExpandableComposite.TWISTIE | ExpandableComposite.EXPANDED);
|
|
908
|
addPart(definedTermDetailSection);
|
|
909
|
}
|
|
910
|
|
|
911
|
@Override
|
|
912
|
public void update(CdmDataChangeMap arg0) {
|
|
913
|
|
|
914
|
}
|
|
915
|
@Inject
|
|
916
|
@Optional
|
|
917
|
private void updateView(@UIEventTopic(WorkbenchEventConstants.REFRESH_TAXON_DETAILS)boolean refresh){
|
|
918
|
if(refresh){
|
|
919
|
refresh();
|
|
920
|
|
|
921
|
// setSelection(getSelection(), true);
|
|
922
|
}
|
|
923
|
}
|
|
924
|
}
|