|
1
|
// $Id$
|
|
2
|
/**
|
|
3
|
* Copyright (C) 2014 EDIT
|
|
4
|
* European Distributed Institute of Taxonomy
|
|
5
|
* http://www.e-taxonomy.eu
|
|
6
|
*
|
|
7
|
* The contents of this file are subject to the Mozilla Public License Version 1.1
|
|
8
|
* See LICENSE.TXT at the top of this package for the full license terms.
|
|
9
|
*/
|
|
10
|
package eu.etaxonomy.taxeditor.ui.section.occurrence.dna;
|
|
11
|
|
|
12
|
import eu.etaxonomy.cdm.model.agent.AgentBase;
|
|
13
|
import eu.etaxonomy.cdm.model.common.DefinedTerm;
|
|
14
|
import eu.etaxonomy.cdm.model.molecular.SingleRead;
|
|
15
|
import eu.etaxonomy.cdm.model.reference.Reference;
|
|
16
|
import eu.etaxonomy.taxeditor.ui.combo.TermComboElement;
|
|
17
|
import eu.etaxonomy.taxeditor.ui.element.CdmFormFactory;
|
|
18
|
import eu.etaxonomy.taxeditor.ui.element.ICdmFormElement;
|
|
19
|
import eu.etaxonomy.taxeditor.ui.element.NumberWithLabelElement;
|
|
20
|
import eu.etaxonomy.taxeditor.ui.element.TextWithLabelElement;
|
|
21
|
import eu.etaxonomy.taxeditor.ui.element.TimePeriodElement;
|
|
22
|
import eu.etaxonomy.taxeditor.ui.section.AbstractCdmDetailElement;
|
|
23
|
import eu.etaxonomy.taxeditor.ui.selection.EntitySelectionElement;
|
|
24
|
|
|
25
|
/**
|
|
26
|
* @author pplitzner
|
|
27
|
* @date 06.01.2014
|
|
28
|
*
|
|
29
|
*/
|
|
30
|
public class SingleReadGeneralDetailElement extends AbstractCdmDetailElement<SingleRead> {
|
|
31
|
|
|
32
|
|
|
33
|
private TimePeriodElement dateElement;
|
|
34
|
private EntitySelectionElement<AgentBase> selectionSequencingStaff;
|
|
35
|
private TermComboElement<DefinedTerm> comboMaterialOrMethod;
|
|
36
|
private TextWithLabelElement textChromatogram;
|
|
37
|
private NumberWithLabelElement textReadLength;
|
|
38
|
private TextWithLabelElement textEditedSequence;
|
|
39
|
private TextWithLabelElement textPrimerName;
|
|
40
|
private TextWithLabelElement textPrimerSequence;
|
|
41
|
private EntitySelectionElement<Reference> selectionReference;
|
|
42
|
|
|
43
|
/**
|
|
44
|
* @param formFactory
|
|
45
|
* @param formElement
|
|
46
|
*/
|
|
47
|
public SingleReadGeneralDetailElement(CdmFormFactory formFactory, ICdmFormElement formElement) {
|
|
48
|
super(formFactory, formElement);
|
|
49
|
}
|
|
50
|
|
|
51
|
/*
|
|
52
|
* (non-Javadoc)
|
|
53
|
*
|
|
54
|
* @see
|
|
55
|
* eu.etaxonomy.taxeditor.section.AbstractCdmDetailElement#createControls
|
|
56
|
* (eu.etaxonomy.taxeditor.forms.ICdmFormElement, java.lang.Object, int)
|
|
57
|
*/
|
|
58
|
@Override
|
|
59
|
protected void createControls(ICdmFormElement formElement, SingleRead entity, int style) {
|
|
60
|
|
|
61
|
dateElement = formFactory.createTimePeriodElement(formElement, "Sequencing Date", entity.getDateSequenced(), style);
|
|
62
|
selectionSequencingStaff = formFactory
|
|
63
|
.createSelectionElement(AgentBase.class,
|
|
64
|
getConversationHolder(), formElement, "Sequencing Staff",
|
|
65
|
null,
|
|
66
|
EntitySelectionElement.ALL, style);
|
|
67
|
// comboMaterialOrMethod = formFactory.createTermComboElement(DefinedTerm.class, formElement, "Mat. & Meth.", entity.getMaterialOrMethod().getDefinedMaterialOrMethod(), style);
|
|
68
|
textChromatogram = formFactory.createTextWithLabelElement(formElement, "Read Chromatogram", "XXX", style);
|
|
69
|
// textReadLength = formFactory.createNumberTextWithLabelElement(formElement, "Read Length", entity.getSequence().getLength(), style);
|
|
70
|
// textEditedSequence = formFactory.createTextWithLabelElement(formElement, "Edited Sequence 5'->3'", entity.getSequenceString(), style);
|
|
71
|
// textPrimerName = formFactory.createTextWithLabelElement(formElement, "Primer Name", entity.getPrimer().getLabel(), style);
|
|
72
|
// textPrimerSequence = formFactory.createTextWithLabelElement(formElement, "Primer seq. 5'->3'", entity.getPrimer().getSequence().getSequenceString(), style);
|
|
73
|
|
|
74
|
selectionReference = formFactory
|
|
75
|
.createSelectionElement(Reference.class,
|
|
76
|
getConversationHolder(), formElement, "Reference",
|
|
77
|
null,
|
|
78
|
EntitySelectionElement.ALL, style);
|
|
79
|
}
|
|
80
|
|
|
81
|
/*
|
|
82
|
* (non-Javadoc)
|
|
83
|
*
|
|
84
|
* @see
|
|
85
|
* eu.etaxonomy.taxeditor.section.AbstractCdmDetailElement#handleEvent(java
|
|
86
|
* .lang.Object)
|
|
87
|
*/
|
|
88
|
@Override
|
|
89
|
public void handleEvent(Object eventSource) {
|
|
90
|
}
|
|
91
|
|
|
92
|
}
|