Revision d0ba58fc
Added by Patrick Plitzner over 9 years ago
- refactored DerivateViewEditorInput to use UUIDs instead of CDM entities
- added delete operation to DerivateView (currently only deleting leafs of the derivate tree is allowed)
| eu.etaxonomy.taxeditor.editor/src/main/java/eu/etaxonomy/taxeditor/editor/view/derivate/DerivateContentProvider.java | ||
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import org.eclipse.jface.viewers.TreeNode; |
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import org.eclipse.jface.viewers.Viewer; |
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import eu.etaxonomy.cdm.api.service.IOccurrenceService; |
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import eu.etaxonomy.cdm.model.molecular.DnaSample; |
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import eu.etaxonomy.cdm.model.molecular.Sequence; |
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import eu.etaxonomy.cdm.model.molecular.SingleRead; |
| ... | ... | |
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import eu.etaxonomy.cdm.model.occurrence.DerivedUnit; |
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import eu.etaxonomy.cdm.model.occurrence.SpecimenOrObservationBase; |
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import eu.etaxonomy.cdm.model.occurrence.SpecimenOrObservationType; |
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import eu.etaxonomy.taxeditor.editor.EditorUtil;
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import eu.etaxonomy.taxeditor.store.CdmStore;
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public class DerivateContentProvider implements ITreeContentProvider {
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| ... | ... | |
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@Override |
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public Object[] getElements(Object inputElement) {
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SpecimenOrObservationBase specimen = null;
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SpecimenOrObservationBase<?> rootElement = null;
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if(inputElement instanceof DerivateViewEditorInput){
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specimen = ((DerivateViewEditorInput) inputElement).getDerivate();
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rootElement = CdmStore.getService(IOccurrenceService.class).load(((DerivateViewEditorInput) inputElement).getRootElementUUID());
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} |
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specimen = EditorUtil.getTopMostDerivate(specimen); |
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if(specimen!=null){
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if(rootElement!=null){
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//show topmost element in the derivate hierarchy if no field unit was found |
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TreeNode node = new TreeNode(specimen);
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TreeNode node = new TreeNode(rootElement);
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return Collections.singleton(node).toArray(); |
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} |
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return null; |
| ... | ... | |
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return !((Sequence)element).getSingleReads().isEmpty(); |
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} |
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else if(element instanceof SpecimenOrObservationBase){
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SpecimenOrObservationBase specimenOrObservation = (SpecimenOrObservationBase)element;
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for(DerivationEvent event:(Set<DerivationEvent>)specimenOrObservation.getDerivationEvents()){
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SpecimenOrObservationBase<?> specimenOrObservation = (SpecimenOrObservationBase<?>)element;
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for(DerivationEvent event:specimenOrObservation.getDerivationEvents()){
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if(!event.getDerivatives().isEmpty()){
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return true; |
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} |
| ... | ... | |
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return false; |
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} |
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private List<DerivedUnit> getDerivates(SpecimenOrObservationBase specimenOrObservation){
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private List<DerivedUnit> getDerivates(SpecimenOrObservationBase<?> specimenOrObservation){
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List<DerivedUnit> derivates = new ArrayList<DerivedUnit>(); |
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for(DerivationEvent derivationEvent:(Set<DerivationEvent>)specimenOrObservation.getDerivationEvents()){
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for(DerivationEvent derivationEvent:specimenOrObservation.getDerivationEvents()){
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derivates.addAll(derivationEvent.getDerivatives()); |
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} |
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return derivates; |
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