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/**
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* Copyright (C) 2007 EDIT
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* European Distributed Institute of Taxonomy
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* http://www.e-taxonomy.eu
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*
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* The contents of this file are subject to the Mozilla Public License Version 1.1
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* See LICENSE.TXT at the top of this package for the full license terms.
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*/
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package eu.etaxonomy.taxeditor.model;
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import java.lang.reflect.InvocationTargetException;
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import java.lang.reflect.Method;
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import java.util.Arrays;
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import java.util.List;
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import java.util.Set;
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import org.apache.commons.lang.StringUtils;
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import org.hibernate.LazyInitializationException;
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import org.joda.time.DateTimeFieldType;
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import org.joda.time.Partial;
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import org.joda.time.format.DateTimeFormatter;
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import eu.etaxonomy.cdm.api.facade.DerivedUnitFacade;
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import eu.etaxonomy.cdm.common.CdmUtils;
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import eu.etaxonomy.cdm.format.description.DefaultCategoricalDescriptionBuilder;
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import eu.etaxonomy.cdm.format.description.DefaultQuantitativeDescriptionBuilder;
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import eu.etaxonomy.cdm.format.description.DescriptionBuilder;
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import eu.etaxonomy.cdm.format.description.QuantitativeDataFormatter;
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import eu.etaxonomy.cdm.model.agent.AgentBase;
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import eu.etaxonomy.cdm.model.common.CdmBase;
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import eu.etaxonomy.cdm.model.common.ExtendedTimePeriod;
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import eu.etaxonomy.cdm.model.common.IdentifiableEntity;
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import eu.etaxonomy.cdm.model.common.Language;
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import eu.etaxonomy.cdm.model.common.LanguageString;
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import eu.etaxonomy.cdm.model.common.LanguageStringBase;
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import eu.etaxonomy.cdm.model.common.Marker;
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import eu.etaxonomy.cdm.model.common.MarkerType;
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import eu.etaxonomy.cdm.model.common.RelationshipBase;
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import eu.etaxonomy.cdm.model.common.RelationshipTermBase;
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import eu.etaxonomy.cdm.model.common.TimePeriod;
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import eu.etaxonomy.cdm.model.description.CategoricalData;
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import eu.etaxonomy.cdm.model.description.CommonTaxonName;
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import eu.etaxonomy.cdm.model.description.DescriptionBase;
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import eu.etaxonomy.cdm.model.description.DescriptionElementBase;
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import eu.etaxonomy.cdm.model.description.DescriptionElementSource;
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import eu.etaxonomy.cdm.model.description.Distribution;
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import eu.etaxonomy.cdm.model.description.Feature;
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import eu.etaxonomy.cdm.model.description.IndividualsAssociation;
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import eu.etaxonomy.cdm.model.description.KeyStatement;
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import eu.etaxonomy.cdm.model.description.PresenceAbsenceTerm;
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import eu.etaxonomy.cdm.model.description.QuantitativeData;
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import eu.etaxonomy.cdm.model.description.SpecimenDescription;
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import eu.etaxonomy.cdm.model.description.TaxonDescription;
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import eu.etaxonomy.cdm.model.description.TaxonInteraction;
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import eu.etaxonomy.cdm.model.description.TaxonNameDescription;
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import eu.etaxonomy.cdm.model.description.TemporalData;
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import eu.etaxonomy.cdm.model.description.TextData;
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import eu.etaxonomy.cdm.model.location.NamedArea;
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import eu.etaxonomy.cdm.model.media.Media;
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import eu.etaxonomy.cdm.model.name.HomotypicalGroup;
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import eu.etaxonomy.cdm.model.name.HybridRelationship;
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import eu.etaxonomy.cdm.model.name.NameRelationship;
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import eu.etaxonomy.cdm.model.name.NameTypeDesignation;
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import eu.etaxonomy.cdm.model.name.SpecimenTypeDesignation;
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import eu.etaxonomy.cdm.model.name.TaxonName;
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import eu.etaxonomy.cdm.model.name.TextualTypeDesignation;
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import eu.etaxonomy.cdm.model.name.TypeDesignationBase;
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import eu.etaxonomy.cdm.model.name.TypeDesignationStatusBase;
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import eu.etaxonomy.cdm.model.occurrence.DeterminationEvent;
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import eu.etaxonomy.cdm.model.occurrence.GatheringEvent;
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import eu.etaxonomy.cdm.model.occurrence.SpecimenOrObservationBase;
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import eu.etaxonomy.cdm.model.permission.Group;
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import eu.etaxonomy.cdm.model.permission.User;
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import eu.etaxonomy.cdm.model.reference.OriginalSourceBase;
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import eu.etaxonomy.cdm.model.taxon.Classification;
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import eu.etaxonomy.cdm.model.taxon.Taxon;
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import eu.etaxonomy.cdm.model.taxon.TaxonBase;
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import eu.etaxonomy.cdm.model.taxon.TaxonNode;
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import eu.etaxonomy.cdm.model.taxon.TaxonRelationship;
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import eu.etaxonomy.cdm.model.term.Representation;
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import eu.etaxonomy.cdm.strategy.cache.common.ExtendedTimePeriodPartialFormatter;
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import eu.etaxonomy.taxeditor.store.CdmStore;
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/**
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* <p>DescriptionHelper class.</p>
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*
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* @author p.ciardelli
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* @author n.hoffmann
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*/
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public class DescriptionHelper {
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/**
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* Returns whatever the element's title cache equivalent is,
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* depending on its class.
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*
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* @param element a {@link eu.etaxonomy.cdm.model.description.DescriptionElementBase} object.
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* @param language a {@link eu.etaxonomy.cdm.model.common.Language} object.
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* @return a {@link java.lang.String} object.
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*/
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public static String getCache(DescriptionElementBase element,
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Language language) {
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String mainElementLabel= null;
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DescriptionBase<?> descr = element.getInDescription();
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descr = CdmBase.deproxy(descr, DescriptionBase.class);
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if (descr != null){
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if (descr.isInstanceOf(TaxonDescription.class)){
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Taxon taxon = CdmBase.deproxy(descr, TaxonDescription.class).getTaxon();
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if (taxon != null){
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mainElementLabel = taxon.getTitleCache();
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}
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}else if (descr.isInstanceOf(SpecimenDescription.class)){
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SpecimenOrObservationBase<?> specimen = CdmBase.deproxy(descr, SpecimenDescription.class).getDescribedSpecimenOrObservation();
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if (specimen != null){
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mainElementLabel = specimen.getTitleCache();
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}
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}else if (descr.isInstanceOf(TaxonNameDescription.class)){
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TaxonName name = CdmBase.deproxy(descr, TaxonNameDescription.class).getTaxonName();
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if (name != null){
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mainElementLabel = name.getTitleCache();
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}
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}
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}
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String cache = null;
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if (element instanceof TextData) {
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//cache = ((TextData) element).getText(language);
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cache = "Text Data";
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}
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if (element instanceof CommonTaxonName) {
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cache = ((CommonTaxonName) element).getName();
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}
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if (element instanceof TaxonInteraction) {
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Taxon taxon2 = ((TaxonInteraction) element).getTaxon2();
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if(taxon2 != null && taxon2.getName() != null){
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cache = taxon2.getName().getTitleCache();
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}else{
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cache = "No taxon chosen";
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}
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}
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if (element instanceof Distribution) {
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Distribution distribution = (Distribution) element;
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NamedArea area = distribution.getArea();
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if(area != null){
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cache = area.getLabel();
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PresenceAbsenceTerm status = distribution.getStatus();
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if (status == null){
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cache += ", no status";
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}else {
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cache += ", " + status.getLabel();
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}
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}
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}
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String result = cache == null ? "" : cache;
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if (isNotBlank(mainElementLabel)){
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result = CdmUtils.concat(" ", result, "(" + mainElementLabel + ")");
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}
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return result;
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}
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/**
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* Returns whatever the element's title cache equivalent is,
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* depending on its class, using the default language.
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*
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* @param element a {@link eu.etaxonomy.cdm.model.description.DescriptionElementBase} object.
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* @return a {@link java.lang.String} object.
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*/
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public static String getCache(DescriptionElementBase element) {
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return getCache(element, CdmStore.getDefaultLanguage());
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}
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/**
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* Set whatever the element's title cache equivalent is,
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* depending on its class.
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*
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* @param element a {@link eu.etaxonomy.cdm.model.description.DescriptionElementBase} object.
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* @param value a {@link java.lang.String} object.
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* @param language a {@link eu.etaxonomy.cdm.model.common.Language} object.
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*/
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public static void setCache(DescriptionElementBase element,
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String value, Language language) {
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if (element instanceof TextData) {
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((TextData) element).putText(language, value);
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return;
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}else if (element instanceof CommonTaxonName) {
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((CommonTaxonName) element).setName(value);
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return;
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}else if (element instanceof TaxonInteraction) {
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}else if(element instanceof Distribution){
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MessagingUtils.warn(DescriptionHelper.class, "trying to set cache on distribution, don't know what to do at the moment.");
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return;
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}else{
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MessagingUtils.warn(DescriptionHelper.class, "No matching subclass found for DescriptionElementBase object, 'cache' not set.");
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}
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}
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/**
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* Set whatever the element's title cache equivalent is,
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* depending on its class, using the default language.
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*
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* @param element a {@link eu.etaxonomy.cdm.model.description.DescriptionElementBase} object.
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* @param value a {@link java.lang.String} object.
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*/
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public static void setCache(DescriptionElementBase element,
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String value) {
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setCache(element, value, CdmStore.getDefaultLanguage());
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}
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public static String getObjectDescription(Object element) {
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String resultString = null;
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if (element instanceof IdentifiableEntity) {
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try{
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resultString = ((IdentifiableEntity) element).getTitleCache();
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}catch(LazyInitializationException e){
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String result = "No Session to initialize title cache for IdentifiableEntity";
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MessagingUtils.error(DescriptionHelper.class, result, e);
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resultString = "TODO: " + result;
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}
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}else if (element instanceof OriginalSourceBase) {
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try{
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OriginalSourceBase<?> originalSource = (OriginalSourceBase<?>) element;
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// ISourceable sourcedObject = originalSource.getSourcedObj();
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//due to #5743 the bidirectionality for sourced object had to be removed
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String sourceObjectTitle = "sourced object data not available (#5743)";
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// if(sourcedObject instanceof IIdentifiableEntity){
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// sourceObjectTitle = ((IdentifiableEntity) sourcedObject).getTitleCache();
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// }else if(sourcedObject instanceof DescriptionElementBase){
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// sourceObjectTitle = "Element for description: " + ((DescriptionElementBase) sourcedObject).getInDescription().getTitleCache();
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// }else{
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// throw new IllegalStateException("Unknown ISourceable object for given OriginalSourceBase");
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// }
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resultString = CdmUtils.concat("; ", new String[]{originalSource.getIdNamespace(), originalSource.getIdInSource(), sourceObjectTitle});
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}catch(LazyInitializationException e){
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String result = "Error initializing title cache for ISourceable of an OriginalSourceBase";
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MessagingUtils.error(DescriptionHelper.class, result, e);
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resultString = "TODO: " + result;
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}
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}else if (element instanceof LanguageStringBase) {
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resultString = ((LanguageStringBase) element).getText();
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}else if (element instanceof DescriptionElementBase) {
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resultString = getCache((DescriptionElementBase) element);
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}else if (element instanceof RelationshipBase<?, ?, ?>) {
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resultString = getCache((RelationshipBase<?, ?, ?>) element);
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}else if (element instanceof TypeDesignationBase<?>) {
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resultString = getCache((TypeDesignationBase<?>) element);
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}else if (element instanceof HomotypicalGroup) {
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resultString = getCache((HomotypicalGroup) element);
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}else if (element instanceof TaxonNode) {
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resultString = getCache((TaxonNode) element);
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}else if (element instanceof DeterminationEvent) {
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resultString = getCache((DeterminationEvent) element);
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}else if (element instanceof GatheringEvent){
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resultString = getCache((GatheringEvent) element);
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}else if (element instanceof Marker) {
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Marker marker = (Marker) element;
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MarkerType type = marker.getMarkerType();
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resultString = (type == null ? "- no marker type -" : marker.getMarkerType().getLabel()) + " (" + marker.getFlag() + ")";
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}else if (element instanceof User) {
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User user = (User) element;
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resultString = user.getUsername();
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}else if (element instanceof Group) {
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Group group = (Group) element;
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resultString = group.getName();
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}else if (element instanceof KeyStatement) {
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KeyStatement keyStatement = (KeyStatement) element;
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resultString = getCache(keyStatement);
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}else{
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// TODO write return texts for HomotypicalGroup, etc.
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resultString = element.toString();
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}
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if (resultString == null){
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resultString = element.toString();
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}
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return resultString;
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}
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private static String getCache(GatheringEvent gatheringEvent){
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String ALTITUDE_PREFIX = "alt. ";
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final String METER = "m";
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String result = "";
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//collector
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AgentBase<?> collector = CdmBase.deproxy(gatheringEvent.getCollector());
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String collectorStr = collector == null? null : collector.getTitleCache();
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result = CdmUtils.concat(", ", result, collectorStr);
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//gathering period
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TimePeriod gatheringPeriod = gatheringEvent.getTimeperiod();
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result = CdmUtils.concat(", ", result, (gatheringPeriod == null? null : gatheringPeriod.toString()));
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//country
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String strCountry = null;
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NamedArea country = gatheringEvent.getCountry();
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Representation repCountry = country == null ? null : country.getRepresentation(Language.DEFAULT());
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strCountry = repCountry == null ? null: repCountry.getLabel();
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result = CdmUtils.concat(", ", result, strCountry);
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//locality
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LanguageString locality = gatheringEvent.getLocality();
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if (locality != null) {
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result = CdmUtils.concat(", ", result, locality.getText());
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}
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//elevation
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String elevationStr;
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if (isNotBlank(gatheringEvent.getAbsoluteElevationText())){
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elevationStr = gatheringEvent.getAbsoluteElevationText();
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}else{
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String text = gatheringEvent.getAbsoluteElevationText();
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Integer min = gatheringEvent.getAbsoluteElevation();
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Integer max = gatheringEvent.getAbsoluteElevationMax();
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elevationStr = DerivedUnitFacade.distanceString(min, max, text, METER);
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}
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if (isNotBlank(elevationStr)){
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result = CdmUtils.concat(", " , result, ALTITUDE_PREFIX);
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result += elevationStr;
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}
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//exact locality
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if (gatheringEvent.getExactLocation() != null){
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String exactLocation = gatheringEvent.getExactLocation().toSexagesimalString(false, false);
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result = CdmUtils.concat(", ", result, exactLocation);
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}
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return result;
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}
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private static String getCache(DeterminationEvent detEvent) {
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//taxon
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String taxonStr = null;
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TaxonName taxonName = detEvent.getTaxonName();
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TaxonBase<?> taxon = detEvent.getTaxon();
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if (taxonName != null){
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taxonStr = taxonName.getTitleCache();
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}
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if (isBlank(taxonStr) && taxon != null){
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taxonStr = taxon.getTitleCache();
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}
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if (isBlank(taxonStr)){
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taxonStr = "no or unlabled taxon";
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}
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//unit
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SpecimenOrObservationBase<?> unit = detEvent.getIdentifiedUnit();
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String unitStr;
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if (unit != null){
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unitStr = unit.getTitleCache();
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if (isBlank(unitStr)){
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unitStr = "Unlabled unit";
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}
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}else{
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unitStr = "no unit";
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}
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String result = CdmUtils.concat(" determined as ", unitStr, taxonStr);
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return result;
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}
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private static String getCache(TaxonNode taxonNode) {
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String result = "";
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Classification classification = taxonNode.getClassification();
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if (classification != null){
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String classificationStr = classification.getName() == null ? "" : classification.getName().getText();
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result = CdmUtils.concat("" , result, classificationStr);
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if (isBlank(result)){
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result = classification.toString();
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}
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}
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String parentStr;
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TaxonNode parentNode = taxonNode.getParent();
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if (parentNode == null){
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parentStr = "no parent";
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}else{
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Taxon parentTaxon = parentNode.getTaxon();
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if (parentTaxon == null){
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parentStr = "no parent taxon";
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}else{
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TaxonName parentName = parentTaxon.getName();
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if (parentName == null){
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parentStr = "child of " + parentTaxon.getTitleCache();
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}else{
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parentStr = "child of " + parentName.getTitleCache();
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}
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395
|
}
|
396
|
}
|
397
|
result = CdmUtils.concat(": ", result, parentStr);
|
398
|
|
399
|
return result;
|
400
|
}
|
401
|
|
402
|
private static String getCache(TypeDesignationBase<?> designation) {
|
403
|
designation = CdmBase.deproxy(designation);
|
404
|
//from
|
405
|
String fromString = null;
|
406
|
Set<TaxonName> from = designation.getTypifiedNames();
|
407
|
if(from != null){
|
408
|
for (TaxonName name : from){
|
409
|
fromString = CdmUtils.concat(",", fromString, name.getTitleCache());
|
410
|
}
|
411
|
}
|
412
|
//to
|
413
|
IdentifiableEntity<?> to = null;
|
414
|
String toStr = "";
|
415
|
if (designation.isInstanceOf(SpecimenTypeDesignation.class)){
|
416
|
to = ((SpecimenTypeDesignation)designation).getTypeSpecimen();
|
417
|
}else if (designation.isInstanceOf(NameTypeDesignation.class)){
|
418
|
to = ((NameTypeDesignation)designation).getTypeName();
|
419
|
}else if (designation.isInstanceOf(TextualTypeDesignation.class)){
|
420
|
toStr = ((TextualTypeDesignation)designation).getPreferredText(CdmStore.getDefaultLanguage());
|
421
|
}else{
|
422
|
throw new RuntimeException("Type Designation class not supported: " + designation.getClass().getName());
|
423
|
}
|
424
|
toStr = to == null? toStr : to.getTitleCache();
|
425
|
//status
|
426
|
String typeLabel = null;
|
427
|
TypeDesignationStatusBase<?> status = designation.getTypeStatus();
|
428
|
if (status != null){
|
429
|
Representation typeRepr = status.getPreferredRepresentation(CdmStore.getDefaultLanguage());
|
430
|
if (typeRepr != null){
|
431
|
typeLabel = typeRepr.getAbbreviatedLabel();
|
432
|
}
|
433
|
if (isBlank(typeLabel) && typeRepr != null){
|
434
|
typeLabel = typeRepr.getLabel();
|
435
|
}
|
436
|
if (isBlank(typeLabel) ){
|
437
|
typeLabel = status.getSymbol();
|
438
|
}
|
439
|
if (isBlank(typeLabel)){
|
440
|
typeLabel = status.getTitleCache();
|
441
|
}
|
442
|
}
|
443
|
if (isBlank(typeLabel)){
|
444
|
typeLabel = "->";
|
445
|
}
|
446
|
//concat
|
447
|
String result = CdmUtils.concat(" ", new String[]{fromString, typeLabel, toStr});
|
448
|
return result;
|
449
|
}
|
450
|
|
451
|
private static String getCache(RelationshipBase<?, ?, ?> rel) {
|
452
|
rel = CdmBase.deproxy(rel);
|
453
|
RelationshipTermBase<?> type = rel.getType();
|
454
|
IdentifiableEntity<?> from;
|
455
|
IdentifiableEntity<?> to;
|
456
|
if (rel.isInstanceOf(NameRelationship.class)){
|
457
|
from = ((NameRelationship)rel).getFromName();
|
458
|
to = ((NameRelationship)rel).getToName();
|
459
|
}else if (rel.isInstanceOf(HybridRelationship.class)){
|
460
|
from = ((HybridRelationship)rel).getParentName();
|
461
|
to = ((HybridRelationship)rel).getHybridName();
|
462
|
}else if (rel.isInstanceOf(TaxonRelationship.class)){
|
463
|
from = ((TaxonRelationship)rel).getFromTaxon();
|
464
|
to = ((TaxonRelationship)rel).getToTaxon();
|
465
|
}else{
|
466
|
try {
|
467
|
Method fromMethod = rel.getClass().getMethod("getRelatedFrom");
|
468
|
Method toMethod = rel.getClass().getMethod("getRelatedFrom");
|
469
|
fromMethod.setAccessible(true);
|
470
|
toMethod.setAccessible(true);
|
471
|
from = (IdentifiableEntity<?>)fromMethod.invoke(rel);
|
472
|
to = (IdentifiableEntity<?>)toMethod.invoke(rel);
|
473
|
} catch (NoSuchMethodException | SecurityException | IllegalAccessException
|
474
|
| IllegalArgumentException | InvocationTargetException e) {
|
475
|
throw new RuntimeException(e);
|
476
|
}
|
477
|
}
|
478
|
String typeLabel = null;
|
479
|
if (type != null){
|
480
|
Representation typeRepr = type.getPreferredRepresentation(CdmStore.getDefaultLanguage());
|
481
|
if (typeRepr != null){
|
482
|
typeLabel = typeRepr.getAbbreviatedLabel();
|
483
|
}
|
484
|
if (isBlank(typeLabel) && typeRepr != null){
|
485
|
typeLabel = typeRepr.getLabel();
|
486
|
}
|
487
|
if (isBlank(typeLabel) ){
|
488
|
typeLabel = type.getSymbol();
|
489
|
}
|
490
|
if (isBlank(typeLabel)){
|
491
|
typeLabel = type.getTitleCache();
|
492
|
}
|
493
|
}
|
494
|
if (isBlank(typeLabel)){
|
495
|
typeLabel = "->";
|
496
|
}
|
497
|
String result = CdmUtils.concat(" ", new String[]{from == null ? null : from.getTitleCache(),
|
498
|
typeLabel, to == null? null : to.getTitleCache()});
|
499
|
return result;
|
500
|
}
|
501
|
|
502
|
|
503
|
private static String getCache(HomotypicalGroup hg) {
|
504
|
String result = "";
|
505
|
for (TaxonName tnb : hg.getTypifiedNames()){
|
506
|
result = CdmUtils.concat(", ", result, tnb.getTitleCache());
|
507
|
}
|
508
|
if (isBlank(result)){
|
509
|
result = "No typified names";
|
510
|
}
|
511
|
return result;
|
512
|
}
|
513
|
|
514
|
private static String getCache(KeyStatement ks) {
|
515
|
String result = "";
|
516
|
|
517
|
result = "KeyStatement";
|
518
|
|
519
|
return result;
|
520
|
}
|
521
|
|
522
|
public static String getObjectClassname(Object element) {
|
523
|
return element.getClass().getSimpleName();
|
524
|
}
|
525
|
|
526
|
public static String getFeatureNodeContainerText(FeatureNodeContainer element) {
|
527
|
String result = null;
|
528
|
if(element.getFeatureNode() != null && element.getFeatureNode().getTerm() != null){
|
529
|
result = element.getFeatureNode().getTerm().getLabel(CdmStore.getDefaultLanguage());
|
530
|
} else{
|
531
|
return "No label set";
|
532
|
}
|
533
|
if (result == null){
|
534
|
result = element.getFeatureNode().getTerm().getLabel();
|
535
|
}
|
536
|
return result;
|
537
|
}
|
538
|
|
539
|
public static String getQuantitativeDataText(QuantitativeData element) {
|
540
|
QuantitativeDataFormatter formatter = new QuantitativeDataFormatter(null, null);
|
541
|
String label = formatter.doFormat(element);
|
542
|
|
543
|
return label;
|
544
|
}
|
545
|
|
546
|
public static String getCategoricalDataText(CategoricalData element) {
|
547
|
TextData textData = categoricalDescriptionBuilder.build(element, getLanguageList());
|
548
|
|
549
|
return textData.getText(CdmStore.getDefaultLanguage());
|
550
|
}
|
551
|
|
552
|
private static List<Language> getLanguageList(){
|
553
|
return Arrays.asList(new Language[]{CdmStore.getDefaultLanguage()});
|
554
|
}
|
555
|
|
556
|
private static DescriptionBuilder<QuantitativeData> quantitativeDescriptionBuilder = new DefaultQuantitativeDescriptionBuilder();
|
557
|
private static DescriptionBuilder<CategoricalData> categoricalDescriptionBuilder = new DefaultCategoricalDescriptionBuilder();
|
558
|
public static final String NO_LABEL_STRING = "[no label]";
|
559
|
|
560
|
|
561
|
public static String getDistributionText(Distribution element) {
|
562
|
|
563
|
String text = "EMPTY";
|
564
|
|
565
|
Distribution distribution = element;
|
566
|
|
567
|
NamedArea area = distribution.getArea();
|
568
|
if(area != null){
|
569
|
|
570
|
text = NamedArea.labelWithLevel(area, CdmStore.getDefaultLanguage());
|
571
|
|
572
|
PresenceAbsenceTerm status = distribution.getStatus();
|
573
|
|
574
|
if (status != null) {
|
575
|
text += ", " + status.getLabel();
|
576
|
}else{
|
577
|
text += ", NO STATUS";
|
578
|
}
|
579
|
}
|
580
|
return text;
|
581
|
}
|
582
|
|
583
|
public static String getImageText(Media media) {
|
584
|
LanguageString title = media.getTitle(CdmStore.getDefaultLanguage());
|
585
|
if (title != null) {
|
586
|
return title.getText();
|
587
|
}
|
588
|
return "No title.";
|
589
|
}
|
590
|
|
591
|
public static String getElementText(TextData element) {
|
592
|
String text = null;
|
593
|
if(element.getFeature().equals(Feature.CITATION())){
|
594
|
text = "";
|
595
|
for(DescriptionElementSource source : element.getSources()){
|
596
|
if(source.getCitation() != null){
|
597
|
text += source.getCitation().getTitleCache();
|
598
|
}
|
599
|
if(source.getNameUsedInSource() != null){
|
600
|
text += " [ " + source.getNameUsedInSource().getTitleCache() + " ]";
|
601
|
}
|
602
|
}
|
603
|
if(isBlank(text)){
|
604
|
text = "No sources provided";
|
605
|
}
|
606
|
}else{
|
607
|
List<Language> languages = Arrays.asList(new Language[]{CdmStore.getDefaultLanguage()});
|
608
|
LanguageString languageString = element.getPreferredLanguageString(languages);
|
609
|
text = languageString != null ? languageString.getText() : null;
|
610
|
}
|
611
|
return isBlank(text) ? "No text provided" : text;
|
612
|
}
|
613
|
|
614
|
public static String getTaxonInteractionText(TaxonInteraction element) {
|
615
|
String text = "";
|
616
|
Taxon taxon2 = element.getTaxon2();
|
617
|
if(taxon2 != null && taxon2.getName() != null){
|
618
|
text = taxon2.getName().getTitleCache();
|
619
|
}else{
|
620
|
text = "No taxon chosen";
|
621
|
}
|
622
|
|
623
|
return text;
|
624
|
}
|
625
|
|
626
|
public static String getCommonNameText(CommonTaxonName commonName) {
|
627
|
String name = commonName.getName();
|
628
|
if (name == null || name.length() == 0) {
|
629
|
name = "No name provided";
|
630
|
}
|
631
|
Language language = commonName.getLanguage();
|
632
|
if (language == null) {
|
633
|
name += " (No language provided)";
|
634
|
} else {
|
635
|
name += " (" + language.getLabel(CdmStore.getDefaultLanguage()) + ")";
|
636
|
}
|
637
|
return name;
|
638
|
}
|
639
|
|
640
|
public static String getDescriptionText(DescriptionBase element) {
|
641
|
String text = element.getTitleCache();
|
642
|
if (text == null || text.length() == 0) {
|
643
|
text = "No label provided";
|
644
|
}
|
645
|
|
646
|
return text;
|
647
|
}
|
648
|
|
649
|
public static String getIndividualsAssociationText(IndividualsAssociation element) {
|
650
|
SpecimenOrObservationBase<?> derivedUnit = element.getAssociatedSpecimenOrObservation();
|
651
|
if(derivedUnit != null){
|
652
|
return derivedUnit.getTitleCache();
|
653
|
}
|
654
|
return "No unit chosen";
|
655
|
}
|
656
|
|
657
|
public static String getLabel(Object element){
|
658
|
if (element instanceof FeatureNodeContainer){
|
659
|
return getFeatureNodeContainerText((FeatureNodeContainer) element);
|
660
|
}
|
661
|
else if (element instanceof DescriptionBase) {
|
662
|
return getDescriptionText((DescriptionBase<?>) element);
|
663
|
}
|
664
|
else if(element instanceof CategoricalData){
|
665
|
String categoricalDataText = getCategoricalDataText((CategoricalData) element);
|
666
|
if(categoricalDataText==null || categoricalDataText.isEmpty()){
|
667
|
categoricalDataText = NO_LABEL_STRING;
|
668
|
}
|
669
|
return categoricalDataText;
|
670
|
}
|
671
|
else if (element instanceof CommonTaxonName) {
|
672
|
return getCommonNameText((CommonTaxonName) element);
|
673
|
}
|
674
|
else if (element instanceof Distribution) {
|
675
|
return getDistributionText((Distribution) element);
|
676
|
}
|
677
|
else if (element instanceof IndividualsAssociation) {
|
678
|
return getIndividualsAssociationText((IndividualsAssociation) element);
|
679
|
}
|
680
|
else if (element instanceof QuantitativeData) {
|
681
|
String quantitativeDataText = getQuantitativeDataText((QuantitativeData) element);
|
682
|
if(isBlank(quantitativeDataText)){
|
683
|
quantitativeDataText = NO_LABEL_STRING;
|
684
|
}
|
685
|
return quantitativeDataText;
|
686
|
}
|
687
|
else if (element instanceof TaxonInteraction) {
|
688
|
return getTaxonInteractionText((TaxonInteraction) element);
|
689
|
}
|
690
|
else if (element instanceof TextData) {
|
691
|
return getElementText((TextData) element);
|
692
|
}
|
693
|
else if (element instanceof TemporalData) {
|
694
|
String lable = getTemporalDataText((TemporalData) element);
|
695
|
if(isBlank(lable)){
|
696
|
lable = NO_LABEL_STRING;
|
697
|
}
|
698
|
return lable;
|
699
|
}
|
700
|
else{
|
701
|
return element.toString();
|
702
|
}
|
703
|
}
|
704
|
|
705
|
private static String getTemporalDataText(TemporalData element) {
|
706
|
String result = "";
|
707
|
|
708
|
ExtendedTimePeriod period = element.getPeriod();
|
709
|
|
710
|
if(period != null){
|
711
|
Partial end = period.getEnd()==null? null :period.getEnd().without(DateTimeFieldType.year());
|
712
|
Partial extremeEnd = period.getExtremeEnd()== null? null: period.getExtremeEnd().without(DateTimeFieldType.year());
|
713
|
|
714
|
Partial start = period.getStart()==null? null: period.getStart().without(DateTimeFieldType.year());
|
715
|
Partial extremeStart = period.getExtremeStart()==null? null : period.getExtremeStart().without(DateTimeFieldType.year());
|
716
|
|
717
|
DateTimeFormatter formatter = ExtendedTimePeriodPartialFormatter.NewInstance();
|
718
|
if (extremeStart != null){
|
719
|
result = "(" + extremeStart.toString(formatter) +"-)";
|
720
|
}
|
721
|
if (start != null){
|
722
|
result += start.toString(formatter);
|
723
|
}
|
724
|
if (end != null){
|
725
|
result += "-" + end.toString(formatter);
|
726
|
}
|
727
|
|
728
|
if (extremeEnd != null){
|
729
|
result += "(-" + extremeEnd.toString(formatter)+")";
|
730
|
}
|
731
|
}
|
732
|
|
733
|
return result;
|
734
|
|
735
|
// return element.getPeriod().toString();
|
736
|
}
|
737
|
|
738
|
private static boolean isNotBlank(String str){
|
739
|
return StringUtils.isNotBlank(str);
|
740
|
}
|
741
|
|
742
|
private static boolean isBlank(String str){
|
743
|
return StringUtils.isBlank(str);
|
744
|
}
|
745
|
}
|