Plugin molecular.lib refactored to use direct project dependencies. This should not be merged into trunk, since this is only for development state. (Currently the trunk is anyway already using different Maven dependencies.)
Adjustments to recent changes in JPhyloIO.
Unnecessary renaming operations removed from POM.
Apache commons.collections dependency is now copied and exported.
MANIFEST in molecular.lib adjusted to use SNAPSHOT releases again.
Merge branch 'develop' into LibrAlign
Updated version in pom / project files to taxeditor version : 4.2.0-SNAPSHOT and cdmlib version : 4.2.0-SNAPSHOT
Set molecular plugins to fixed version number
Updated version in pom / project files to taxeditor version : 4.1.0-SNAPSHOT and cdmlib version : 4.1.0-SNAPSHOT
Exports of plugin molecular.lib updated.
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