EDIT

// $Id$

/**

* Copyright (C) 2013 EDIT

* European Distributed Institute of Taxonomy

* http://www.e-taxonomy.eu

*

* The contents of this file are subject to the Mozilla Public License Version 1.1

* See LICENSE.TXT at the top of this package for the full license terms.

*/

package eu.etaxonomy.taxeditor.editor.view.dataimport.transientServices;

import java.io.IOException;

import java.util.Collection;

import java.util.HashSet;

import java.util.List;

import java.util.Map;

import java.util.Set;

import java.util.UUID;

import org.apache.lucene.index.CorruptIndexException;

import org.apache.lucene.queryparser.classic.ParseException;

import org.hibernate.LockOptions;

import org.hibernate.Session;

import org.hibernate.criterion.Criterion;

import org.hibernate.envers.query.criteria.AuditCriterion;

import org.hibernate.search.spatial.impl.Rectangle;

import eu.etaxonomy.cdm.api.facade.DerivedUnitFacade;

import eu.etaxonomy.cdm.api.facade.DerivedUnitFacadeNotSupportedException;

import eu.etaxonomy.cdm.api.service.DeleteResult;

import eu.etaxonomy.cdm.api.service.IOccurrenceService;

import eu.etaxonomy.cdm.api.service.UpdateResult;

import eu.etaxonomy.cdm.api.service.config.DeleteConfiguratorBase;

import eu.etaxonomy.cdm.api.service.config.IIdentifiableEntityServiceConfigurator;

import eu.etaxonomy.cdm.api.service.config.SpecimenDeleteConfigurator;

import eu.etaxonomy.cdm.api.service.dto.FieldUnitDTO;

import eu.etaxonomy.cdm.api.service.dto.FindByIdentifierDTO;

import eu.etaxonomy.cdm.api.service.dto.PreservedSpecimenDTO;

import eu.etaxonomy.cdm.api.service.pager.Pager;

import eu.etaxonomy.cdm.api.service.search.SearchResult;

import eu.etaxonomy.cdm.api.service.util.TaxonRelationshipEdge;

import eu.etaxonomy.cdm.common.monitor.IProgressMonitor;

import eu.etaxonomy.cdm.model.common.Annotation;

import eu.etaxonomy.cdm.model.common.DefinedTerm;

import eu.etaxonomy.cdm.model.common.DefinedTermBase;

import eu.etaxonomy.cdm.model.common.ICdmBase;

import eu.etaxonomy.cdm.model.common.ISourceable;

import eu.etaxonomy.cdm.model.common.IdentifiableSource;

import eu.etaxonomy.cdm.model.common.LSID;

import eu.etaxonomy.cdm.model.common.Language;

import eu.etaxonomy.cdm.model.common.Marker;

import eu.etaxonomy.cdm.model.common.MarkerType;

import eu.etaxonomy.cdm.model.description.DescriptionBase;

import eu.etaxonomy.cdm.model.description.DescriptionElementBase;

import eu.etaxonomy.cdm.model.description.IndividualsAssociation;

import eu.etaxonomy.cdm.model.location.Country;

import eu.etaxonomy.cdm.model.media.Media;

import eu.etaxonomy.cdm.model.media.Rights;

import eu.etaxonomy.cdm.model.molecular.DnaSample;

import eu.etaxonomy.cdm.model.molecular.Sequence;

import eu.etaxonomy.cdm.model.name.SpecimenTypeDesignation;

import eu.etaxonomy.cdm.model.name.TaxonNameBase;

import eu.etaxonomy.cdm.model.occurrence.DerivationEvent;

import eu.etaxonomy.cdm.model.occurrence.DerivedUnit;

import eu.etaxonomy.cdm.model.occurrence.DeterminationEvent;

import eu.etaxonomy.cdm.model.occurrence.FieldUnit;

import eu.etaxonomy.cdm.model.occurrence.SpecimenOrObservationBase;

import eu.etaxonomy.cdm.model.taxon.Taxon;

import eu.etaxonomy.cdm.model.taxon.TaxonBase;

import eu.etaxonomy.cdm.model.view.AuditEvent;

import eu.etaxonomy.cdm.model.view.AuditEventRecord;

import eu.etaxonomy.cdm.persistence.dao.common.AuditEventSort;

import eu.etaxonomy.cdm.persistence.dto.MergeResult;

import eu.etaxonomy.cdm.persistence.dto.UuidAndTitleCache;

import eu.etaxonomy.cdm.persistence.query.Grouping;

import eu.etaxonomy.cdm.persistence.query.MatchMode;

import eu.etaxonomy.cdm.persistence.query.OrderHint;

import eu.etaxonomy.cdm.strategy.cache.common.IIdentifiableEntityCacheStrategy;

import eu.etaxonomy.cdm.strategy.match.IMatchStrategy;

import eu.etaxonomy.cdm.strategy.merge.IMergeStrategy;

/**

 * @author pplitzner

 * @date 26.09.2013

 *

 */

public class TransientOccurenceService implements IOccurrenceService {

    private final IOccurrenceService defaultService;

    private final Collection<SpecimenOrObservationBase<?>> units;

    /**

     * @param defaultService

     */

    public TransientOccurenceService(IOccurrenceService defaultService) {

        this.defaultService = defaultService;

        this.units = new HashSet<SpecimenOrObservationBase<?>>();

    }

    /**

     * @param t

     * @param pageSize

     * @param pageNumber

     * @param sort

     * @param propertyPaths

     * @return

     * @see eu.etaxonomy.cdm.api.service.IVersionableService#pageAuditEvents(eu.etaxonomy.cdm.model.common.VersionableEntity, java.lang.Integer, java.lang.Integer, eu.etaxonomy.cdm.persistence.dao.common.AuditEventSort, java.util.List)

     */

    @Override

    public Pager<AuditEventRecord<SpecimenOrObservationBase>> pageAuditEvents(SpecimenOrObservationBase t, Integer pageSize, Integer pageNumber, AuditEventSort sort, List<String> propertyPaths) {

        return defaultService.pageAuditEvents(t, pageSize, pageNumber, sort, propertyPaths);

    }

    /**

     * @param annotatedObj

     * @param status

     * @param pageSize

     * @param pageNumber

     * @param orderHints

     * @param propertyPaths

     * @return

     * @see eu.etaxonomy.cdm.api.service.IAnnotatableService#getAnnotations(eu.etaxonomy.cdm.model.common.AnnotatableEntity, eu.etaxonomy.cdm.model.common.MarkerType, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)

     */

    @Override

    public Pager<Annotation> getAnnotations(SpecimenOrObservationBase annotatedObj, MarkerType status, Integer pageSize, Integer pageNumber, List<OrderHint> orderHints, List<String> propertyPaths) {

        return defaultService.getAnnotations(annotatedObj, status, pageSize, pageNumber, orderHints, propertyPaths);

    }

    /**

     *

     * @see eu.etaxonomy.cdm.api.service.IService#clear()

     */

    @Override

    public void clear() {

        defaultService.clear();

    }

    /**

     * @param t

     * @param lockMode

     * @see eu.etaxonomy.cdm.api.service.IService#lock(eu.etaxonomy.cdm.model.common.ICdmBase, org.hibernate.LockMode)

     */

    @Override

    public void lock(SpecimenOrObservationBase t, LockOptions lockOptions) {

        defaultService.lock(t, lockOptions);

    }

    /**

     * @param t

     * @param lockMode

     * @param propertyPaths

     * @see eu.etaxonomy.cdm.api.service.IService#refresh(eu.etaxonomy.cdm.model.common.ICdmBase, org.hibernate.LockMode, java.util.List)

     */

    @Override

    public void refresh(SpecimenOrObservationBase t, LockOptions lockOptions, List<String> propertyPaths) {

        defaultService.refresh(t, lockOptions, propertyPaths);

    }

    /**

     *

     * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#updateTitleCache()

     */

    @Override

    public void updateTitleCache() {

        defaultService.updateTitleCache();

    }

    /**

     * @param t

     * @return

     * @see eu.etaxonomy.cdm.api.service.IVersionableService#getNextAuditEvent(eu.etaxonomy.cdm.model.common.VersionableEntity)

     */

    @Override

    public AuditEventRecord<SpecimenOrObservationBase> getNextAuditEvent(SpecimenOrObservationBase t) {

        return defaultService.getNextAuditEvent(t);

    }

    /**

     * @param annotatableEntity

     * @param technical

     * @param pageSize

     * @param pageNumber

     * @param orderHints

     * @param propertyPaths

     * @return

     * @see eu.etaxonomy.cdm.api.service.IAnnotatableService#getMarkers(eu.etaxonomy.cdm.model.common.AnnotatableEntity, java.lang.Boolean, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)

     */

    @Override

    public Pager<Marker> getMarkers(SpecimenOrObservationBase annotatableEntity, Boolean technical, Integer pageSize, Integer pageNumber, List<OrderHint> orderHints, List<String> propertyPaths) {

        return defaultService.getMarkers(annotatableEntity, technical, pageSize, pageNumber, orderHints, propertyPaths);

    }

    /**

     * @param clazz

     * @param stepSize

     * @param cacheStrategy

     * @param monitor

     * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#updateTitleCache(java.lang.Class, java.lang.Integer, eu.etaxonomy.cdm.strategy.cache.common.IIdentifiableEntityCacheStrategy, eu.etaxonomy.cdm.common.monitor.IProgressMonitor)

     */

    @Override

    public void updateTitleCache(Class<? extends SpecimenOrObservationBase> clazz, Integer stepSize, IIdentifiableEntityCacheStrategy<SpecimenOrObservationBase> cacheStrategy, IProgressMonitor monitor) {

        defaultService.updateTitleCache(clazz, stepSize, cacheStrategy, monitor);

    }

    /**

     * @param t

     * @return

     * @see eu.etaxonomy.cdm.api.service.IVersionableService#getPreviousAuditEvent(eu.etaxonomy.cdm.model.common.VersionableEntity)

     */

    @Override

    public AuditEventRecord<SpecimenOrObservationBase> getPreviousAuditEvent(SpecimenOrObservationBase t) {

        return defaultService.getPreviousAuditEvent(t);

    }

    /**

     * @param iso639

     * @return

     * @see eu.etaxonomy.cdm.api.service.IOccurrenceService#getCountryByIso(java.lang.String)

     */

    @Override

    public Country getCountryByIso(String iso639) {

        return defaultService.getCountryByIso(iso639);

    }

    /**

     * @param clazz

     * @return

     * @see eu.etaxonomy.cdm.api.service.IService#count(java.lang.Class)

     */

    @Override

    public int count(Class<? extends SpecimenOrObservationBase> clazz) {

        return defaultService.count(clazz);

    }

    /**

     * @param name

     * @return

     * @see eu.etaxonomy.cdm.api.service.IOccurrenceService#getCountryByName(java.lang.String)

     */

    @Override

    public List<Country> getCountryByName(String name) {

        return defaultService.getCountryByName(name);

    }

    /**

     * @param type

     * @param determinedAs

     * @param limit

     * @param start

     * @param orderHints

     * @param propertyPaths

     * @return

     * @see eu.etaxonomy.cdm.api.service.IOccurrenceService#list(java.lang.Class, eu.etaxonomy.cdm.model.taxon.TaxonBase, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)

     */

    @Override

    public Pager<SpecimenOrObservationBase> list(Class<? extends SpecimenOrObservationBase> type, TaxonBase determinedAs, Integer limit, Integer start, List<OrderHint> orderHints, List<String> propertyPaths) {

        return defaultService.list(type, determinedAs, limit, start, orderHints, propertyPaths);

    }

    /**

     * @param clazz

     * @param from

     * @param to

     * @param criteria

     * @param pageSize

     * @param pageValue

     * @param sort

     * @param propertyPaths

     * @return

     * @see eu.etaxonomy.cdm.api.service.IVersionableService#pageAuditEvents(java.lang.Class, eu.etaxonomy.cdm.model.view.AuditEvent, eu.etaxonomy.cdm.model.view.AuditEvent, java.util.List, java.lang.Integer, java.lang.Integer, eu.etaxonomy.cdm.persistence.dao.common.AuditEventSort, java.util.List)

     */

    @Override

    public Pager<AuditEventRecord<SpecimenOrObservationBase>> pageAuditEvents(Class<? extends SpecimenOrObservationBase> clazz, AuditEvent from, AuditEvent to, List<AuditCriterion> criteria, Integer pageSize, Integer pageValue, AuditEventSort sort, List<String> propertyPaths) {

        return defaultService.pageAuditEvents(clazz, from, to, criteria, pageSize, pageValue, sort, propertyPaths);

    }

    /**

     * @param lsid

     * @return

     * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#find(eu.etaxonomy.cdm.model.common.LSID)

     */

    @Override

    public SpecimenOrObservationBase find(LSID lsid) {

        return defaultService.find(lsid);

    }

    /**

     * @param persistentObject

     * @return

     * @see eu.etaxonomy.cdm.api.service.IService#delete(eu.etaxonomy.cdm.model.common.ICdmBase)

     */

    @Override

    public DeleteResult delete(SpecimenOrObservationBase persistentObject) {

        return defaultService.delete(persistentObject);

    }

    /**

     * @param clazz

     * @param technical

     * @param pageSize

     * @param pageNumber

     * @param propertyPaths

     * @return

     * @see eu.etaxonomy.cdm.api.service.IAnnotatableService#groupMarkers(java.lang.Class, java.lang.Boolean, java.lang.Integer, java.lang.Integer, java.util.List)

     */

    @Override

    public List<Object[]> groupMarkers(Class<? extends SpecimenOrObservationBase> clazz, Boolean technical, Integer pageSize, Integer pageNumber, List<String> propertyPaths) {

        return defaultService.groupMarkers(clazz, technical, pageSize, pageNumber, propertyPaths);

    }

    /**

     * @param uuid

     * @return

     * @see eu.etaxonomy.cdm.api.service.IService#exists(java.util.UUID)

     */

    @Override

    public boolean exists(UUID uuid) {

        return defaultService.exists(uuid);

    }

    /**

     * @param x

     * @param y

     * @return

     * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#replace(eu.etaxonomy.cdm.model.common.IdentifiableEntity, eu.etaxonomy.cdm.model.common.IdentifiableEntity)

     */

    @Override

    public SpecimenOrObservationBase replace(SpecimenOrObservationBase x, SpecimenOrObservationBase y) {

        return defaultService.replace(x, y);

    }

    /**

     * @param uuidSet

     * @return

     * @see eu.etaxonomy.cdm.api.service.IService#find(java.util.Set)

     */

    @Override

    public List<SpecimenOrObservationBase> find(Set<UUID> uuidSet) {

        return defaultService.find(uuidSet);

    }

    /**

     * @param t

     * @param pageSize

     * @param pageNumber

     * @param propertyPaths

     * @return

     * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#getSources(eu.etaxonomy.cdm.model.common.IdentifiableEntity, java.lang.Integer, java.lang.Integer, java.util.List)

     */

    @Override

    public Pager<IdentifiableSource> getSources(SpecimenOrObservationBase t, Integer pageSize, Integer pageNumber, List<String> propertyPaths) {

        return defaultService.getSources(t, pageSize, pageNumber, propertyPaths);

    }

    /**

     * @param uuid

     * @return

     * @see eu.etaxonomy.cdm.api.service.IService#find(java.util.UUID)

     */

    @Override

    public SpecimenOrObservationBase find(UUID uuid) {

        return defaultService.find(uuid);

    }

    /**

     * @param id

     * @return

     * @see eu.etaxonomy.cdm.api.service.IService#find(int)

     */

    @Override

    public SpecimenOrObservationBase find(int id) {

        return defaultService.find(id);

    }

    /**

     * @param t

     * @param pageSize

     * @param pageNumber

     * @param propertyPaths

     * @return

     * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#getRights(eu.etaxonomy.cdm.model.common.IdentifiableEntity, java.lang.Integer, java.lang.Integer, java.util.List)

     */

    @Override

    public Pager<Rights> getRights(SpecimenOrObservationBase t, Integer pageSize, Integer pageNumber, List<String> propertyPaths) {

        return defaultService.getRights(t, pageSize, pageNumber, propertyPaths);

    }

    /**

     * @param clazz

     * @param technical

     * @return

     * @see eu.etaxonomy.cdm.api.service.IAnnotatableService#countMarkers(java.lang.Class, java.lang.Boolean)

     */

    @Override

    public int countMarkers(Class<? extends SpecimenOrObservationBase> clazz, Boolean technical) {

        return defaultService.countMarkers(clazz, technical);

    }

    /**

     * @param occurence

     * @param pageSize

     * @param pageNumber

     * @param propertyPaths

     * @return

     * @see eu.etaxonomy.cdm.api.service.IOccurrenceService#getMedia(eu.etaxonomy.cdm.model.occurrence.SpecimenOrObservationBase, java.lang.Integer, java.lang.Integer, java.util.List)

     */

    @Override

    public Pager<Media> getMedia(SpecimenOrObservationBase occurence, Integer pageSize, Integer pageNumber, List<String> propertyPaths) {

        return defaultService.getMedia(occurence, pageSize, pageNumber, propertyPaths);

    }

    /**

     * @param idSet

     * @return

     * @see eu.etaxonomy.cdm.api.service.IService#findById(java.util.Set)

     */

    @Override

    public List<SpecimenOrObservationBase> findById(Set<Integer> idSet) {

        return defaultService.findById(idSet);

    }

    /**

     * @param clazz

     * @param idInSource

     * @param idNamespace

     * @return

     * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#getSourcedObjectByIdInSource(java.lang.Class, java.lang.String, java.lang.String)

     */

    @Override

    public ISourceable getSourcedObjectByIdInSource(Class clazz, String idInSource, String idNamespace) {

        return defaultService.getSourcedObjectByIdInSource(clazz, idInSource, idNamespace);

    }

    /**

     * @return

     * @see eu.etaxonomy.cdm.api.service.IService#getSession()

     */

    @Override

    public Session getSession() {

        return defaultService.getSession();

    }

    /**

     * @param clazz

     * @param limit

     * @param start

     * @param groups

     * @param propertyPaths

     * @return

     * @see eu.etaxonomy.cdm.api.service.IService#group(java.lang.Class, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)

     */

    @Override

    public List<Object[]> group(Class<? extends SpecimenOrObservationBase> clazz, Integer limit, Integer start, List<Grouping> groups, List<String> propertyPaths) {

        return defaultService.group(clazz, limit, start, groups, propertyPaths);

    }

    /**

     * @param occurence

     * @param taxonBase

     * @param pageSize

     * @param pageNumber

     * @param propertyPaths

     * @return

     * @see eu.etaxonomy.cdm.api.service.IOccurrenceService#getDeterminations(eu.etaxonomy.cdm.model.occurrence.SpecimenOrObservationBase, eu.etaxonomy.cdm.model.taxon.TaxonBase, java.lang.Integer, java.lang.Integer, java.util.List)

     */

    @Override

    public Pager<DeterminationEvent> getDeterminations(SpecimenOrObservationBase occurence, TaxonBase taxonBase, Integer pageSize, Integer pageNumber, List<String> propertyPaths) {

        return defaultService.getDeterminations(occurence, taxonBase, pageSize, pageNumber, propertyPaths);

    }

    /**

     * @param clazz

     * @param queryString

     * @param matchmode

     * @param criteria

     * @param pageSize

     * @param pageNumber

     * @param orderHints

     * @param propertyPaths

     * @return

     * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#findByTitle(java.lang.Class, java.lang.String, eu.etaxonomy.cdm.persistence.query.MatchMode, java.util.List, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)

     */

    @Override

    public Pager<SpecimenOrObservationBase> findByTitle(Class<? extends SpecimenOrObservationBase> clazz, String queryString, MatchMode matchmode, List<Criterion> criteria, Integer pageSize, Integer pageNumber, List<OrderHint> orderHints, List<String> propertyPaths) {

        return defaultService.findByTitle(clazz, queryString, matchmode, criteria, pageSize, pageNumber, orderHints, propertyPaths);

    }

    /**

     * @param occurence

     * @param pageSize

     * @param pageNumber

     * @param propertyPaths

     * @return

     * @see eu.etaxonomy.cdm.api.service.IOccurrenceService#getDerivationEvents(eu.etaxonomy.cdm.model.occurrence.SpecimenOrObservationBase, java.lang.Integer, java.lang.Integer, java.util.List)

     */

    @Override

    public Pager<DerivationEvent> getDerivationEvents(SpecimenOrObservationBase occurence, Integer pageSize, Integer pageNumber, List<String> propertyPaths) {

        return defaultService.getDerivationEvents(occurence, pageSize, pageNumber, propertyPaths);

    }

    /**

     * @param type

     * @param limit

     * @param start

     * @param orderHints

     * @param propertyPaths

     * @return

     * @see eu.etaxonomy.cdm.api.service.IService#list(java.lang.Class, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)

     */

    @Override

    public <S extends SpecimenOrObservationBase> List<S> list(Class<S> type, Integer limit, Integer start, List<OrderHint> orderHints, List<String> propertyPaths) {

        return defaultService.list(type, limit, start, orderHints, propertyPaths);

    }

    /**

     * @param clazz

     * @param query

     * @param pageSize

     * @param pageNumber

     * @param orderHints

     * @param propertyPaths

     * @return

     * @see eu.etaxonomy.cdm.api.service.IOccurrenceService#search(java.lang.Class, java.lang.String, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)

     */

    @Override

    public Pager<SpecimenOrObservationBase> search(Class<? extends SpecimenOrObservationBase> clazz, String query, Integer pageSize, Integer pageNumber, List<OrderHint> orderHints, List<String> propertyPaths) {

        return defaultService.search(clazz, query, pageSize, pageNumber, orderHints, propertyPaths);

    }

    /**

     * @param configurator

     * @return

     * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#findByTitle(eu.etaxonomy.cdm.api.service.config.IIdentifiableEntityServiceConfigurator)

     */

    @Override

    public Pager<SpecimenOrObservationBase> findByTitle(IIdentifiableEntityServiceConfigurator<SpecimenOrObservationBase> configurator) {

        return defaultService.findByTitle(configurator);

    }

    /**

     * @param clazz

     * @param queryString

     * @param matchmode

     * @param criteria

     * @return

     * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#countByTitle(java.lang.Class, java.lang.String, eu.etaxonomy.cdm.persistence.query.MatchMode, java.util.List)

     */

    @Override

    public Integer countByTitle(Class<? extends SpecimenOrObservationBase> clazz, String queryString, MatchMode matchmode, List<Criterion> criteria) {

        return defaultService.countByTitle(clazz, queryString, matchmode, criteria);

    }

    /**

     * @param uuid

     * @return

     * @see eu.etaxonomy.cdm.api.service.IService#load(java.util.UUID)

     */

    @Override

    public SpecimenOrObservationBase load(UUID uuid) {

        return defaultService.load(uuid);

    }

    /**

     * @param uuid

     * @param propertyPaths

     * @return

     * @see eu.etaxonomy.cdm.api.service.IService#load(java.util.UUID, java.util.List)

     */

    @Override

    public SpecimenOrObservationBase load(UUID uuid, List<String> propertyPaths) {

        return defaultService.load(uuid, propertyPaths);

    }

    /**

     * @param configurator

     * @return

     * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#countByTitle(eu.etaxonomy.cdm.api.service.config.IIdentifiableEntityServiceConfigurator)

     */

    @Override

    public Integer countByTitle(IIdentifiableEntityServiceConfigurator<SpecimenOrObservationBase> configurator) {

        return defaultService.countByTitle(configurator);

    }

    /**

     * @return

     * @see eu.etaxonomy.cdm.api.service.IOccurrenceService#getFieldUnitUuidAndTitleCache()

     */

    @Override

    public List<UuidAndTitleCache<FieldUnit>> getFieldUnitUuidAndTitleCache() {

        return defaultService.getFieldUnitUuidAndTitleCache();

    }

    /**

     * @return

     * @see eu.etaxonomy.cdm.api.service.IOccurrenceService#getDerivedUnitUuidAndTitleCache()

     */

    @Override

    public List<UuidAndTitleCache<DerivedUnit>> getDerivedUnitUuidAndTitleCache() {

        return defaultService.getDerivedUnitUuidAndTitleCache();

    }

    /**

     * @param transientObject

     * @return

     * @see eu.etaxonomy.cdm.api.service.IService#merge(eu.etaxonomy.cdm.model.common.ICdmBase)

     */

    @Override

    public SpecimenOrObservationBase merge(SpecimenOrObservationBase transientObject) {

        return defaultService.merge(transientObject);

    }

    /**

     * @param derivedUnit

     * @param propertyPaths

     * @return

     * @throws DerivedUnitFacadeNotSupportedException

     * @see eu.etaxonomy.cdm.api.service.IOccurrenceService#getDerivedUnitFacade(eu.etaxonomy.cdm.model.occurrence.DerivedUnit, java.util.List)

     */

    @Override

    public DerivedUnitFacade getDerivedUnitFacade(DerivedUnit derivedUnit, List<String> propertyPaths) throws DerivedUnitFacadeNotSupportedException {

        return defaultService.getDerivedUnitFacade(derivedUnit, propertyPaths);

    }

    /**

     * @param clazz

     * @param queryString

     * @param matchmode

     * @param criteria

     * @param pageSize

     * @param pageNumber

     * @param orderHints

     * @param propertyPaths

     * @return

     * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#listByTitle(java.lang.Class, java.lang.String, eu.etaxonomy.cdm.persistence.query.MatchMode, java.util.List, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)

     */

    @Override

    public List<SpecimenOrObservationBase> listByTitle(Class<? extends SpecimenOrObservationBase> clazz, String queryString, MatchMode matchmode, List<Criterion> criteria, Integer pageSize, Integer pageNumber, List<OrderHint> orderHints, List<String> propertyPaths) {

        return defaultService.listByTitle(clazz, queryString, matchmode, criteria, pageSize, pageNumber, orderHints, propertyPaths);

    }

    /**

     * @param description

     * @param propertyPaths

     * @return

     * @see eu.etaxonomy.cdm.api.service.IOccurrenceService#listDerivedUnitFacades(eu.etaxonomy.cdm.model.description.DescriptionBase, java.util.List)

     */

    @Override

    public List<DerivedUnitFacade> listDerivedUnitFacades(DescriptionBase description, List<String> propertyPaths) {

        return defaultService.listDerivedUnitFacades(description, propertyPaths);

    }

    /**

     * @param type

     * @param pageSize

     * @param pageNumber

     * @param orderHints

     * @param propertyPaths

     * @return

     * @see eu.etaxonomy.cdm.api.service.IService#page(java.lang.Class, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)

     */

    @Override

    public <S extends SpecimenOrObservationBase> Pager<S> page(Class<S> type, Integer pageSize, Integer pageNumber, List<OrderHint> orderHints, List<String> propertyPaths) {

        return defaultService.page(type, pageSize, pageNumber, orderHints, propertyPaths);

    }

    /**

     * @param type

     * @param includeRelationships

     * @param associatedTaxon

     * @param maxDepth

     * @param pageSize

     * @param pageNumber

     * @param orderHints

     * @param propertyPaths

     * @return

     * @see eu.etaxonomy.cdm.api.service.IOccurrenceService#listByAssociatedTaxon(java.lang.Class, java.util.Set, eu.etaxonomy.cdm.model.taxon.Taxon, java.lang.Integer, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)

     */

    @Override

    public <T extends SpecimenOrObservationBase> List<T> listByAssociatedTaxon(Class<T> type, Set<TaxonRelationshipEdge> includeRelationships, Taxon associatedTaxon, Integer maxDepth, Integer pageSize, Integer pageNumber, List<OrderHint> orderHints, List<String> propertyPaths) {

        return defaultService.listByAssociatedTaxon(type, includeRelationships, associatedTaxon, maxDepth, pageSize, pageNumber, orderHints, propertyPaths);

    }

    /**

     * @param persistentObject

     * @return

     * @see eu.etaxonomy.cdm.api.service.IService#refresh(eu.etaxonomy.cdm.model.common.ICdmBase)

     */

    @Override

    public UUID refresh(SpecimenOrObservationBase persistentObject) {

        return defaultService.refresh(persistentObject);

    }

    /**

     * @param clazz

     * @param queryString

     * @param matchmode

     * @param criteria

     * @param pageSize

     * @param pageNumber

     * @param orderHints

     * @param propertyPaths

     * @return

     * @see eu.etaxonomy.cdm.api.service.IIdentifiableEntityService#listByReferenceTitle(java.lang.Class, java.lang.String, eu.etaxonomy.cdm.persistence.query.MatchMode, java.util.List, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)

     */

    @Override

    public List<SpecimenOrObservationBase> listByReferenceTitle(Class<? extends SpecimenOrObservationBase> clazz, String queryString, MatchMode matchmode, List<Criterion> criteria, Integer pageSize, Integer pageNumber, List<OrderHint> orderHints, List<String> propertyPaths) {

        return defaultService.listByReferenceTitle(clazz, queryString, matchmode, criteria, pageSize, pageNumber, orderHints, propertyPaths);

    }

    /**

     * @param tableName

     * @param limit

     * @param start

     * @return

     * @see eu.etaxonomy.cdm.api.service.IService#rows(java.lang.String, int, int)

     */

    @Override

    public List<SpecimenOrObservationBase> rows(String tableName, int limit, int start) {

        return defaultService.rows(tableName, limit, start);

    }

    /**

     * @param newInstances

     * @return

     * @see eu.etaxonomy.cdm.api.service.IService#save(java.util.Collection)

     */

    @Override

    public Map<UUID, SpecimenOrObservationBase> save(Collection<SpecimenOrObservationBase> newInstances) {

        for(SpecimenOrObservationBase unit:newInstances){

            save(unit);

        }

        return null;

    }

    /**

     * @param type

     * @param includeRelationships

     * @param associatedTaxon

     * @param maxDepth

     * @param pageSize

     * @param pageNumber

     * @param orderHints

     * @param propertyPaths

     * @return

     * @see eu.etaxonomy.cdm.api.service.IOccurrenceService#pageByAssociatedTaxon(java.lang.Class, java.util.Set, eu.etaxonomy.cdm.model.taxon.Taxon, java.lang.Integer, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)

     */

    @Override

    public <T extends SpecimenOrObservationBase> Pager<T> pageByAssociatedTaxon(Class<T> type, Set<TaxonRelationshipEdge> includeRelationships, Taxon associatedTaxon, Integer maxDepth, Integer pageSize, Integer pageNumber, List<OrderHint> orderHints, List<String> propertyPaths) {

        return defaultService.pageByAssociatedTaxon(type, includeRelationships, associatedTaxon, maxDepth, pageSize, pageNumber, orderHints, propertyPaths);

    }

    /**

     * @param newInstance

     * @return

     * @see eu.etaxonomy.cdm.api.service.IService#save(eu.etaxonomy.cdm.model.common.ICdmBase)

     */

    @Override

    public SpecimenOrObservationBase save(SpecimenOrObservationBase newInstance) {

        units.add(newInstance);

        return null;

    }

    /**

     * @param transientObject

     * @return

     * @see eu.etaxonomy.cdm.api.service.IService#saveOrUpdate(eu.etaxonomy.cdm.model.common.ICdmBase)

     */

    @Override

    public UUID saveOrUpdate(SpecimenOrObservationBase transientObject) {

        units.add(transientObject);

        return null;

    }

    /**

     * @param transientObjects

     * @return

     * @see eu.etaxonomy.cdm.api.service.IService#saveOrUpdate(java.util.Collection)

     */

    @Override

    public Map<UUID, SpecimenOrObservationBase> saveOrUpdate(Collection<SpecimenOrObservationBase> transientObjects) {

        for(SpecimenOrObservationBase unit:transientObjects){

            saveOrUpdate(unit);

        }

        return null;

    }

    /**

     * @param clazz

     * @param queryString

     * @param boundingBox

     * @param languages

     * @param highlightFragments

     * @param pageSize

     * @param pageNumber

     * @param orderHints

     * @param propertyPaths

     * @return

     * @throws CorruptIndexException

     * @throws IOException

     * @throws ParseException

     * @see eu.etaxonomy.cdm.api.service.IOccurrenceService#findByFullText(java.lang.Class, java.lang.String, org.hibernate.search.spatial.impl.Rectangle, java.util.List, boolean, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)

     */

    @Override

    public Pager<SearchResult<SpecimenOrObservationBase>> findByFullText(Class<? extends SpecimenOrObservationBase> clazz, String queryString, Rectangle boundingBox, List<Language> languages, boolean highlightFragments, Integer pageSize, Integer pageNumber, List<OrderHint> orderHints, List<String> propertyPaths) throws CorruptIndexException, IOException, ParseException {

        return defaultService.findByFullText(clazz, queryString, boundingBox, languages, highlightFragments, pageSize, pageNumber, orderHints, propertyPaths);

    }

    /**

     * @param transientObject

     * @return

     * @see eu.etaxonomy.cdm.api.service.IService#update(eu.etaxonomy.cdm.model.common.ICdmBase)

     */

    @Override

    public UUID update(SpecimenOrObservationBase transientObject) {

        return defaultService.update(transientObject);

    }

    /**

     * @param example

     * @param includeProperties

     * @param limit

     * @param start

     * @param orderHints

     * @param propertyPaths

     * @return

     * @see eu.etaxonomy.cdm.api.service.IService#list(eu.etaxonomy.cdm.model.common.ICdmBase, java.util.Set, java.lang.Integer, java.lang.Integer, java.util.List, java.util.List)

     */

    @Override

    public List<SpecimenOrObservationBase> list(SpecimenOrObservationBase example, Set<String> includeProperties, Integer limit, Integer start, List<OrderHint> orderHints, List<String> propertyPaths) {

        return defaultService.list(example, includeProperties, limit, start, orderHints, propertyPaths);

    }

    @Override

    public int deduplicate(Class<? extends SpecimenOrObservationBase> clazz, IMatchStrategy matchStrategy, IMergeStrategy mergeStrategy) {

        return defaultService.deduplicate(clazz, matchStrategy, mergeStrategy);

    }

    @Override

    public Pager<SpecimenOrObservationBase> findTitleCache(Class<? extends SpecimenOrObservationBase> clazz, String queryString, Integer pageSize, Integer pageNumber, List<OrderHint> orderHints, MatchMode matchMode) {

        return defaultService.findTitleCache(clazz, queryString, pageSize, pageNumber, orderHints, matchMode);

    }

    public Collection<SpecimenOrObservationBase<?>> getUnits() {

        return units;

    }

    @Override

    public Collection<FieldUnit> getFieldUnits(UUID derivedUnitUuid) {

        return defaultService.getFieldUnits(derivedUnitUuid);

    }

    @Override

    public <T extends SpecimenOrObservationBase> Pager<T> pageByAssociatedTaxon(Class<T> type,

            Set<TaxonRelationshipEdge> includeRelationships, String taxonUUID, Integer maxDepth, Integer pageSize,

            Integer pageNumber, List<OrderHint> orderHints, List<String> propertyPaths) {

        return defaultService.pageByAssociatedTaxon(type, includeRelationships, taxonUUID,

                maxDepth, pageSize, pageNumber, orderHints, propertyPaths);

    }

    @Override

    public UpdateResult moveSequence(DnaSample from, DnaSample to, Sequence sequence) {

        return defaultService.moveSequence(from, to, sequence);

    }

	@Override

	public DeleteResult isDeletable(SpecimenOrObservationBase object,

			DeleteConfiguratorBase config) {

		return defaultService.isDeletable(object, config);

	}

    @Override

    public int countDeterminations(SpecimenOrObservationBase occurence, TaxonBase taxonbase) {

        return defaultService.countDeterminations(occurence, taxonbase);

    }

	@Override

	public SpecimenOrObservationBase findWithoutFlush(UUID uuid) {

		return defaultService.findWithoutFlush(uuid);

	}

	@Override

	public Collection<SpecimenOrObservationBase> listFieldUnitsByAssociatedTaxon(Taxon associatedTaxon,

	        List<OrderHint> orderHints, List<String> propertyPaths) {

	    return defaultService.listFieldUnitsByAssociatedTaxon(associatedTaxon, orderHints, propertyPaths);

	}

	@Override

	public Pager<SpecimenOrObservationBase> pageFieldUnitsByAssociatedTaxon(

	        Set<TaxonRelationshipEdge> includeRelationships, Taxon associatedTaxon, Integer maxDepth, Integer pageSize,

	        Integer pageNumber, List<OrderHint> orderHints, List<String> propertyPaths) {

	    return defaultService.pageFieldUnitsByAssociatedTaxon(includeRelationships, associatedTaxon, maxDepth, pageSize, pageNumber, orderHints, propertyPaths);

	}

	@Override

	public FieldUnitDTO assembleFieldUnitDTO(FieldUnit fieldUnit, UUID associatedTaxonUuid) {

	    return defaultService.assembleFieldUnitDTO(fieldUnit, associatedTaxonUuid);

	}

	@Override

	public PreservedSpecimenDTO assemblePreservedSpecimenDTO(DerivedUnit derivedUnit) {

	    return defaultService.assemblePreservedSpecimenDTO(derivedUnit);

	}

    @Override

    public Collection<ICdmBase> getNonCascadedAssociatedElements(SpecimenOrObservationBase<?> specimen) {