Revision a3a12095
Added by Patrick Plitzner almost 6 years ago
| eu.etaxonomy.taxeditor.cdmlib/.classpath | ||
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| 1 | 1 |
<?xml version="1.0" encoding="UTF-8"?> |
| 2 | 2 |
<classpath> |
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<classpathentry exported="true" kind="lib" path="lib/commons-math3-3.6.1.jar"/> |
|
| 3 | 4 |
<classpathentry exported="true" kind="lib" path="lib/org.swtchart_0.10.0.v20160212.jar"/> |
| 4 | 5 |
<classpathentry exported="true" kind="lib" path="lib/redmine-java-api-3.1.0.jar"/> |
| 5 | 6 |
<classpathentry kind="con" path="org.eclipse.jdt.launching.JRE_CONTAINER/org.eclipse.jdt.internal.debug.ui.launcher.StandardVMType/JavaSE-1.8"/> |
| eu.etaxonomy.taxeditor.cdmlib/META-INF/MANIFEST.MF | ||
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| 231 | 231 |
org.apache.commons.lang.exception, |
| 232 | 232 |
org.apache.commons.lang.text, |
| 233 | 233 |
org.apache.commons.logging, |
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org.apache.commons.math3.stat, |
|
| 234 | 235 |
org.apache.fop.apps, |
| 235 | 236 |
org.apache.http, |
| 236 | 237 |
org.apache.http.client, |
| ... | ... | |
| 869 | 870 |
lib/lucene-sandbox-5.4.1.jar, |
| 870 | 871 |
lib/lucene-suggest-5.4.1.jar, |
| 871 | 872 |
lib/redmine-java-api-3.1.0.jar, |
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lib/org.swtchart_0.10.0.v20160212.jar |
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lib/org.swtchart_0.10.0.v20160212.jar, |
|
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lib/commons-math3-3.6.1.jar |
|
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Import-Package: eu.etaxonomy.cdm.api.application |
| eu.etaxonomy.taxeditor.cdmlib/build.properties | ||
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| 223 | 223 |
lib/lucene-suggest-5.4.1.jar,\ |
| 224 | 224 |
lib/cdmlib-cache-5.2.0-SNAPSHOT.jar,\ |
| 225 | 225 |
lib/redmine-java-api-3.1.0.jar,\ |
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lib/org.swtchart_0.10.0.v20160212.jar |
|
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lib/org.swtchart_0.10.0.v20160212.jar,\ |
|
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lib/commons-math3-3.6.1.jar |
|
| 227 | 228 |
|
| 228 | 229 |
jars.compile.order = . |
| 229 | 230 |
output.. = bin/ |
| eu.etaxonomy.taxeditor.editor/src/main/java/eu/etaxonomy/taxeditor/editor/descriptiveDataSet/matrix/CategoricalDataHistogram.java | ||
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| 8 | 8 |
*/ |
| 9 | 9 |
package eu.etaxonomy.taxeditor.editor.descriptiveDataSet.matrix; |
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|
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import java.util.HashMap; |
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import java.util.Map; |
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import java.util.ArrayList; |
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import java.util.List; |
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|
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import org.apache.commons.math3.stat.Frequency; |
|
| 13 | 15 |
|
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import eu.etaxonomy.cdm.model.description.Feature; |
| 15 | 17 |
import eu.etaxonomy.cdm.model.description.State; |
| ... | ... | |
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public class CategoricalDataHistogram {
|
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|
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private Feature feature; |
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private Map<State, Integer> stateCountMap; |
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private Frequency frequency; |
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private List<State> states; |
|
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|
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public CategoricalDataHistogram(Feature feature) {
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this.feature = feature; |
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this.stateCountMap = new HashMap<>(); |
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this.states = new ArrayList<>(); |
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this.frequency = new Frequency(); |
|
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feature.getSupportedCategoricalEnumerations() |
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.forEach(voc->voc.getTerms() |
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.forEach(state->stateCountMap.put(state, 0)));
|
|
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.forEach(state->states.add(state)));
|
|
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} |
| 34 | 38 |
|
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public void addState(State state){
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Integer integer = stateCountMap.get(state); |
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stateCountMap.put(state, integer+1); |
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frequency.addValue(state.getLabel()); |
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} |
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|
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public long getCount(State state){
|
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return frequency.getCount(state.getLabel()); |
|
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} |
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|
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public Map<State, Integer> getStateCountMap() {
|
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return stateCountMap;
|
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public List<State> getStates() {
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return states;
|
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} |
| 43 | 50 |
|
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public Feature getFeature() {
|
| eu.etaxonomy.taxeditor.editor/src/main/java/eu/etaxonomy/taxeditor/editor/descriptiveDataSet/matrix/ChartTooltip.java | ||
|---|---|---|
| 8 | 8 |
*/ |
| 9 | 9 |
package eu.etaxonomy.taxeditor.editor.descriptiveDataSet.matrix; |
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import java.util.Iterator; |
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import java.util.Map; |
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import java.util.Map.Entry; |
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import java.util.List; |
|
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|
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import org.eclipse.jface.window.ToolTip; |
| 16 | 14 |
import org.eclipse.swt.SWT; |
| ... | ... | |
| 57 | 55 |
Chart chart = new Chart(parent, SWT.NONE); |
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chart.setLayoutData(new GridData(600, 300)); |
| 59 | 57 |
|
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//get histogram for column |
|
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int colPos = matrix.getNatTable().getColumnPositionByX(event.x); |
| 61 | 60 |
int colIndex = matrix.getNatTable().getColumnIndexByPosition(colPos); |
| 62 | 61 |
Feature feature = matrix.getIndexToFeatureMap().get(colIndex); |
| 63 | 62 |
CategoricalDataHistogram histogram = matrix.getFeatureToHistogramMap().get(feature); |
| 64 | 63 |
|
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// set titles
|
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// set chart title
|
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chart.getTitle().setText(feature.getLabel()); |
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IAxis xAxis = chart.getAxisSet().getXAxis(0); |
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Map<State, Integer> stateCountMap = histogram.getStateCountMap(); |
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String[] states = new String[stateCountMap.size()]; |
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double[] counts = new double[stateCountMap.size()]; |
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|
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//initalize x and y axis values |
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List<State> statesList = histogram.getStates(); |
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String[] states = new String[statesList.size()]; |
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double[] counts = new double[statesList.size()]; |
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|
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int index = 0; |
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for(Iterator<Entry<State, Integer>> iterator = histogram.getStateCountMap().entrySet().iterator();iterator.hasNext();){
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Entry<State, Integer> entry = iterator.next(); |
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states[index] = entry.getKey().getLabel(); |
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counts[index] = entry.getValue(); |
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for (State state : statesList) {
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states[index] = state.getLabel(); |
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counts[index] = histogram.getCount(state); |
|
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index++; |
| 77 | 78 |
} |
| 78 | 79 |
xAxis.setCategorySeries(states); |
| ... | ... | |
| 82 | 83 |
|
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IAxis yAxis = chart.getAxisSet().getYAxis(0); |
| 84 | 85 |
yAxis.getTitle().setVisible(false); |
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// yAxis.getTick().setVisible(false); |
|
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|
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// chart.setOrientation(SWT.VERTICAL); |
|
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chart.getLegend().setVisible(false); |
| 89 | 88 |
|
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// create bar series |
|
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IBarSeries barSeries = (IBarSeries) chart.getSeriesSet() |
| 92 | 90 |
.createSeries(SeriesType.BAR, "state counts"); |
| 93 | 91 |
ISeriesLabel seriesLabel = barSeries.getLabel(); |
| ... | ... | |
| 95 | 93 |
seriesLabel.setVisible(true); |
| 96 | 94 |
barSeries.setYSeries(counts); |
| 97 | 95 |
|
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// adjust the axis range |
|
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chart.getAxisSet().adjustRange(); |
| 100 | 97 |
|
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return chart; |
| ... | ... | |
| 116 | 113 |
&& rowPos==1 |
| 117 | 114 |
&& colIndex>=CharacterMatrix.LEADING_COLUMN_COUNT |
| 118 | 115 |
&& histogram!=null |
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&& !histogram.getStateCountMap().isEmpty()) {
|
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&& !histogram.getStates().isEmpty()) {
|
|
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return true; |
| 121 | 118 |
} |
| 122 | 119 |
return false; |
Also available in: Unified diff
ref #7549 Add/use apache common math for frequency distribution