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/**
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* Copyright (C) 2018 EDIT
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* European Distributed Institute of Taxonomy
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* http://www.e-taxonomy.eu
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*
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* The contents of this file are subject to the Mozilla Public License Version 1.1
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* See LICENSE.TXT at the top of this package for the full license terms.
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*/
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package eu.etaxonomy.taxeditor.preference;
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import java.net.URI;
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import org.eclipse.swt.SWT;
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import org.eclipse.swt.custom.CLabel;
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import org.eclipse.swt.events.SelectionAdapter;
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import org.eclipse.swt.events.SelectionEvent;
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import org.eclipse.swt.events.SelectionListener;
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import org.eclipse.swt.layout.GridData;
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import org.eclipse.swt.layout.GridLayout;
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import org.eclipse.swt.widgets.Button;
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import org.eclipse.swt.widgets.Combo;
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import org.eclipse.swt.widgets.Composite;
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import org.eclipse.swt.widgets.Control;
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import org.eclipse.swt.widgets.Label;
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import org.eclipse.swt.widgets.Text;
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import eu.etaxonomy.cdm.api.application.ICdmRepository;
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import eu.etaxonomy.cdm.io.specimen.abcd206.in.Abcd206ImportConfigurator;
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import eu.etaxonomy.cdm.model.metadata.CdmPreference;
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import eu.etaxonomy.cdm.model.metadata.CdmPreference.PrefKey;
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import eu.etaxonomy.cdm.model.metadata.PreferencePredicate;
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import eu.etaxonomy.cdm.model.metadata.PreferenceSubject;
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import eu.etaxonomy.cdm.model.name.NomenclaturalCode;
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import eu.etaxonomy.taxeditor.l10n.Messages;
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import eu.etaxonomy.taxeditor.preference.menu.CdmPreferencePage;
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import eu.etaxonomy.taxeditor.store.CdmStore;
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/**
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* @author k.luther
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* @since 23.03.2018
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*
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*/
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public class AbcdImportPreference extends CdmPreferencePage implements IE4PreferencePage, SelectionListener {
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private Abcd206ImportConfigurator configurator;
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private Combo nomenclaturalCodeSelectionCombo;
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private boolean allowOverride = true;
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private boolean override = true;
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private CdmPreference preference = null;
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Text textDNAProviderString;
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private Composite composite;
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Combo overrideCombo;
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@Override
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protected Control createContents(Composite parent) {
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getValues();
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//configurator = PreferencesUtil.getAbcdImportConfigurationPreference();
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final CLabel description = new CLabel(parent, SWT.NULL);
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description.setText(Messages.AbcdImportPreference_description);
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// final CLabel overrideDescription = new CLabel(parent, SWT.NULL);
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// overrideDescription.setText("");
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// GridData textGrid = createTextGridData();
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// textGrid.verticalSpan = 2;
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// overrideDescription.setLayoutData(textGrid);
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overrideCombo = new Combo(parent, SWT.BORDER | SWT.READ_ONLY);
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overrideCombo.add(LocalOrDefaultEnum.Default.getLabel(), 0);
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overrideCombo.add(LocalOrDefaultEnum.Local.getLabel(), 1);
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overrideCombo.addSelectionListener(this);
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if (override){
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overrideCombo.select(1);
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}else{
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overrideCombo.select(0);
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}
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composite = new Composite(parent, SWT.NULL);
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GridLayout gridLayout = new GridLayout();
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composite.setLayout(gridLayout);
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Button checkBoxMediaSpecimen = new Button(composite, SWT.CHECK);
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checkBoxMediaSpecimen.setSelection(configurator.isAddMediaAsMediaSpecimen());
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checkBoxMediaSpecimen.setText(Messages.AbcdImportPreference_media_as_mediaSpecimen);
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checkBoxMediaSpecimen
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.setToolTipText(Messages.AbcdImportPreference_media_as_subUnit);
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checkBoxMediaSpecimen.addSelectionListener(new SelectionAdapter() {
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@Override
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public void widgetSelected(SelectionEvent e) {
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configurator.setAddMediaAsMediaSpecimen(!configurator.isAddMediaAsMediaSpecimen());
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setApply(true);
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}
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});
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Button checkBoxIgnoreExisting = new Button(composite, SWT.CHECK);
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checkBoxIgnoreExisting.setSelection(configurator.isIgnoreImportOfExistingSpecimen());
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checkBoxIgnoreExisting.setText(Messages.AbcdImportPreference_not_import_existing_specimen);
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checkBoxIgnoreExisting
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.setToolTipText(Messages.AbcdImportPreference_not_import_existing_specimen_tooltip);
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checkBoxIgnoreExisting.addSelectionListener(new SelectionAdapter() {
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@Override
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public void widgetSelected(SelectionEvent e) {
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configurator.setIgnoreImportOfExistingSpecimen(!configurator.isIgnoreImportOfExistingSpecimen());
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setApply(true);
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}
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});
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Button checkBoxIgnoreAuthorship = new Button(composite, SWT.CHECK);
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checkBoxIgnoreAuthorship.setSelection(configurator.isIgnoreAuthorship());
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checkBoxIgnoreAuthorship.setText(Messages.AbcdImportPreference_ignore_author);
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checkBoxIgnoreAuthorship
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.setToolTipText(Messages.AbcdImportPreference_ignore_author_tooltip);
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checkBoxIgnoreAuthorship.addSelectionListener(new SelectionAdapter() {
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@Override
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public void widgetSelected(SelectionEvent e) {
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configurator.setIgnoreAuthorship(!configurator.isIgnoreAuthorship());
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setApply(true);
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}
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});
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Button checkBoxMapUnitIdToCatalogNumber = new Button(composite, SWT.CHECK);
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checkBoxMapUnitIdToCatalogNumber.setSelection(configurator.isMapUnitIdToCatalogNumber());
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checkBoxMapUnitIdToCatalogNumber.setText(Messages.AbcdImportPreference_map_unit_nr_catalog_number);
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checkBoxMapUnitIdToCatalogNumber
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.setToolTipText(Messages.AbcdImportPreference_map_unit_number_catalog_number_tooltip);
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checkBoxMapUnitIdToCatalogNumber.addSelectionListener(new SelectionAdapter() {
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@Override
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public void widgetSelected(SelectionEvent e) {
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configurator.setMapUnitIdToCatalogNumber(!configurator.isMapUnitIdToCatalogNumber());
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setApply(true);
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}
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});
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//TODO: only one of the mappings can be checked!
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Button checkBoxMapUnitIdToAccessionNumber = new Button(composite, SWT.CHECK);
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checkBoxMapUnitIdToAccessionNumber.setSelection(configurator.isMapUnitIdToAccessionNumber());
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checkBoxMapUnitIdToAccessionNumber.setText(Messages.AbcdImportPreference_map_unit_number_to_accession_number);
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checkBoxMapUnitIdToAccessionNumber
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.setToolTipText(Messages.AbcdImportPreference_map_unit_number_accession_number_tooltip);
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checkBoxMapUnitIdToAccessionNumber.addSelectionListener(new SelectionAdapter() {
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@Override
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public void widgetSelected(SelectionEvent e) {
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configurator.setMapUnitIdToAccessionNumber(!configurator.isMapUnitIdToAccessionNumber());
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setApply(true);
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}
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});
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Button checkBoxMapUnitIdToBarcode = new Button(composite, SWT.CHECK);
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checkBoxMapUnitIdToBarcode.setSelection(configurator.isMapUnitIdToBarcode());
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checkBoxMapUnitIdToBarcode.setText(Messages.AbcdImportPreference_map_unit_number_barcode);
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checkBoxMapUnitIdToBarcode
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.setToolTipText(Messages.AbcdImportPreference_map_unit_number_barcode_tooltip);
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checkBoxMapUnitIdToBarcode.addSelectionListener(new SelectionAdapter() {
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@Override
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public void widgetSelected(SelectionEvent e) {
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configurator.setMapUnitIdToBarcode(!configurator.isMapUnitIdToBarcode());
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setApply(true);
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}
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});
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Button checkBoxRemoveCountry = new Button(composite, SWT.CHECK);
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checkBoxRemoveCountry.setSelection(configurator.isRemoveCountryFromLocalityText());
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checkBoxRemoveCountry.setText(Messages.AbcdImportPreference_remove_country_from_locality);
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checkBoxRemoveCountry
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.setToolTipText(Messages.AbcdImportPreference_remove_country_from_locality_tooltip);
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checkBoxRemoveCountry.addSelectionListener(new SelectionAdapter() {
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@Override
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public void widgetSelected(SelectionEvent e) {
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configurator.setRemoveCountryFromLocalityText(!configurator.isRemoveCountryFromLocalityText());
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setApply(true);
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}
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});
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Button checkBoxMoveToDefaultClassification = new Button(composite, SWT.CHECK);
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checkBoxMoveToDefaultClassification.setSelection(configurator.isMoveNewTaxaToDefaultClassification());
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checkBoxMoveToDefaultClassification.setText(Messages.AbcdImportPreference_create_new_classification_new_taxa);
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checkBoxMoveToDefaultClassification
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.setToolTipText(Messages.AbcdImportPreference_create_new_classification_new_taxa_tooltip);
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checkBoxMoveToDefaultClassification.addSelectionListener(new SelectionAdapter() {
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@Override
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public void widgetSelected(SelectionEvent e) {
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configurator.setMoveNewTaxaToDefaultClassification(!configurator.isMoveNewTaxaToDefaultClassification());
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setApply(true);
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}
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});
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Button checkBoxImportSiblings = new Button(composite, SWT.CHECK);
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checkBoxImportSiblings.setSelection(configurator.isGetSiblings());
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checkBoxImportSiblings.setText(Messages.AbcdImportPreference_import_all_children_for_cultures_or_tissues);
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checkBoxImportSiblings
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.setToolTipText(Messages.AbcdImportPreference_import_all_children_for_cultures_or_tissues_tooltip);
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checkBoxImportSiblings.addSelectionListener(new SelectionAdapter() {
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@Override
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public void widgetSelected(SelectionEvent e) {
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configurator.setGetSiblings(!configurator.isGetSiblings());
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setApply(true);
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}
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});
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Button checkBoxAddIndividualsAssociations = new Button(composite, SWT.CHECK);
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checkBoxAddIndividualsAssociations.setSelection(configurator.isAddIndividualsAssociationsSuchAsSpecimenAndObservations());
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checkBoxAddIndividualsAssociations.setText(Messages.AbcdImportPreference_create_Individual_Association);
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checkBoxAddIndividualsAssociations
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.setToolTipText(Messages.AbcdImportPreference_create_Individual_Association_tooltip);
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checkBoxAddIndividualsAssociations.addSelectionListener(new SelectionAdapter() {
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@Override
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public void widgetSelected(SelectionEvent e) {
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configurator.setAddIndividualsAssociationsSuchAsSpecimenAndObservations(!configurator.isAddIndividualsAssociationsSuchAsSpecimenAndObservations());
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setApply(true);
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}
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});
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Button checkBoxReuseDescriptiveGroups = new Button(composite, SWT.CHECK);
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checkBoxReuseDescriptiveGroups.setSelection(configurator.isReuseExistingDescriptiveGroups());
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checkBoxReuseDescriptiveGroups.setText(Messages.AbcdImportPreference_reuse_descriptive_group);
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checkBoxReuseDescriptiveGroups
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.setToolTipText(Messages.AbcdImportPreference_reuse_descriptive_group_tooltip);
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checkBoxReuseDescriptiveGroups.addSelectionListener(new SelectionAdapter() {
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@Override
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public void widgetSelected(SelectionEvent e) {
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configurator.setReuseExistingDescriptiveGroups(!configurator.isReuseExistingDescriptiveGroups());
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setApply(true);
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}
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});
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Button checkBoxReuseExistingTaxa = new Button(composite, SWT.CHECK);
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checkBoxReuseExistingTaxa.setSelection(configurator.isReuseExistingTaxaWhenPossible());
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checkBoxReuseExistingTaxa.setText(Messages.AbcdImportPreference_reuse_existing_taxa);
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checkBoxReuseExistingTaxa
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.setToolTipText(Messages.AbcdImportPreference_reuse_existing_taxa_tooltip);
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checkBoxReuseExistingTaxa.addSelectionListener(new SelectionAdapter() {
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@Override
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public void widgetSelected(SelectionEvent e) {
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configurator.setReuseExistingTaxaWhenPossible(!configurator.isReuseExistingTaxaWhenPossible());
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setApply(true);
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}
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});
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Label labelRef = new Label(composite, SWT.NONE);
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labelRef.setText("Biocase provider for associated DNA");
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new Label(composite, SWT.NONE);
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textDNAProviderString = new Text(composite, SWT.NONE);
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textDNAProviderString.setEnabled(true);
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textDNAProviderString.setLayoutData(new GridData(SWT.FILL, SWT.TOP, true, true, 1, 1));
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textDNAProviderString.setText(configurator.getDnaSoure().toString());
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GridData gridData = new GridData();
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gridData = new GridData(GridData.BEGINNING, GridData.CENTER, true, false);
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gridData.horizontalIndent = 5;
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// classificationSelection.setLayoutData(gridData);
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nomenclaturalCodeSelectionCombo = new Combo(composite, SWT.BORDER| SWT.READ_ONLY);
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nomenclaturalCodeSelectionCombo.setLayoutData(gridData);
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for(NomenclaturalCode code: NomenclaturalCode.values()){
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nomenclaturalCodeSelectionCombo.add(code.getKey());
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}
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int index = 0;
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if (configurator.getNomenclaturalCode() != null){
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for (String label : nomenclaturalCodeSelectionCombo.getItems()){
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if (label.equals(configurator.getNomenclaturalCode().getKey())){
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nomenclaturalCodeSelectionCombo.select(index);
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}
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index++;
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}
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}
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// TODO remember last selection
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nomenclaturalCodeSelectionCombo.addSelectionListener(this);
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if (preference != null){
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allowOverride = preference.isAllowOverride();
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}
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if (!override){
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//composite.setEnabled(false);
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PreferencesUtil.recursiveSetEnabled(composite, override);
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}
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return composite;
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}
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@Override
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public void widgetSelected(SelectionEvent e) {
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if (e.getSource().equals(nomenclaturalCodeSelectionCombo)){
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this.configurator.setNomenclaturalCode(NomenclaturalCode.getByKey(nomenclaturalCodeSelectionCombo.getText()));
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}
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if (e.getSource().equals(overrideCombo)) {
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override = overrideCombo.getText().equals(LocalOrDefaultEnum.Local.getLabel())?true:false;
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}
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PreferencesUtil.recursiveSetEnabled(composite, override);
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setApply(true);
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}
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@Override
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public boolean performOk() {
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if (!isApply()){
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return true;
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}
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if (configurator != null){
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String configString = configurator.toString();
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if (override){
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PreferencesUtil.setStringValue(PreferencePredicate.AbcdImportConfig.getKey(), configString);
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PreferencesUtil.setBooleanValue( PreferencesUtil.prefOverrideKey(PreferencePredicate.AbcdImportConfig.getKey()), override);
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}else{
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PreferencesUtil.setBooleanValue( PreferencesUtil.prefOverrideKey(PreferencePredicate.AbcdImportConfig.getKey()), override);
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}
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}
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return true;
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}
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/**
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* {@inheritDoc}
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*/
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@Override
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public void widgetDefaultSelected(SelectionEvent e) {
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// TODO Auto-generated method stub
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}
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@Override
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protected void performDefaults() {
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configurator = Abcd206ImportConfigurator.NewInstance(null,null);
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preference = CdmPreference.NewTaxEditorInstance(PreferencePredicate.AbcdImportConfig, configurator.toString());
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preference.setAllowOverride(true);
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super.performDefaults();
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}
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@Override
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public void getValues() {
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isAdminPreference = false;
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configurator = Abcd206ImportConfigurator.NewInstance(null,null);
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ICdmRepository controller;
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controller = CdmStore.getCurrentApplicationConfiguration();
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PrefKey key = CdmPreference.NewKey(PreferenceSubject.NewTaxEditorInstance(), PreferencePredicate.AbcdImportConfig);
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preference = controller.getPreferenceService().find(key);
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if (preference != null ){
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allowOverride = preference.isAllowOverride();
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}else{
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preference = CdmPreference.NewTaxEditorInstance(PreferencePredicate.AbcdImportConfig, configurator.toString());
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}
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override = PreferencesUtil.getBooleanValue(
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PreferencesUtil.prefOverrideKey(PreferencePredicate.AbcdImportConfig.getKey()), true) != null? PreferencesUtil.getBooleanValue(
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PreferencesUtil.prefOverrideKey(PreferencePredicate.AbcdImportConfig.getKey()), true):false;
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String configString;
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if (!override){
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configString = preference.getValue();
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}else{
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configString = PreferencesUtil.getStringValue(PreferencePredicate.AbcdImportConfig.getKey(), true);
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}
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if(configString!=null){
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String[] configArray = configString.split(";"); //$NON-NLS-1$
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for (String configItem: configArray){
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String[] keyValue = configItem.split(":"); //$NON-NLS-1$
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if(keyValue.length==2){
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String keyString = keyValue[0];
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String valueString = keyValue[1];
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if (keyString.equals("ignoreImportOfExistingSpecimen")){ //$NON-NLS-1$
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configurator.setIgnoreImportOfExistingSpecimen(Boolean.valueOf(valueString));
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}else if (keyString.equals("addIndividualsAssociationsSuchAsSpecimenAndObservations")){ //$NON-NLS-1$
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configurator.setAddIndividualsAssociationsSuchAsSpecimenAndObservations(Boolean.valueOf(valueString));
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}else if (keyString.equals("reuseExistingTaxaWhenPossible")){ //$NON-NLS-1$
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configurator.setReuseExistingTaxaWhenPossible(Boolean.valueOf(valueString));
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}else if (keyString.equals("ignoreAuthorship")){ //$NON-NLS-1$
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configurator.setIgnoreAuthorship(Boolean.valueOf(valueString));
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}else if (keyString.equals("addMediaAsMediaSpecimen")){ //$NON-NLS-1$
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configurator.setAddMediaAsMediaSpecimen(Boolean.valueOf(valueString));
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382
|
}else if (keyString.equals("reuseExistingMetaData")){ //$NON-NLS-1$
|
383
|
configurator.setReuseExistingMetaData(Boolean.valueOf(valueString));
|
384
|
}else if (keyString.equals("reuseExistingDescriptiveGroups")){ //$NON-NLS-1$
|
385
|
configurator.setReuseExistingDescriptiveGroups(Boolean.valueOf(valueString));
|
386
|
}else if (keyString.equals("allowReuseOtherClassifications")){ //$NON-NLS-1$
|
387
|
configurator.setAllowReuseOtherClassifications(Boolean.valueOf(valueString));
|
388
|
}else if (keyString.equals("deduplicateReferences")){ //$NON-NLS-1$
|
389
|
configurator.setDeduplicateReferences(Boolean.valueOf(valueString));
|
390
|
}else if (keyString.equals("deduplicateClassifications")){ //$NON-NLS-1$
|
391
|
configurator.setDeduplicateClassifications(Boolean.valueOf(valueString));
|
392
|
}else if (keyString.equals("moveNewTaxaToDefaultClassification")){ //$NON-NLS-1$
|
393
|
configurator.setMoveNewTaxaToDefaultClassification(Boolean.valueOf(valueString));
|
394
|
}else if (keyString.equals("mapUnitIdToCatalogNumber")){ //$NON-NLS-1$
|
395
|
configurator.setMapUnitIdToCatalogNumber(Boolean.valueOf(valueString));
|
396
|
}else if (keyString.equals("mapUnitIdToAccessionNumber")){ //$NON-NLS-1$
|
397
|
configurator.setMapUnitIdToAccessionNumber(Boolean.valueOf(valueString));
|
398
|
}else if (keyString.equals("mapUnitIdToBarcode")){ //$NON-NLS-1$
|
399
|
configurator.setMapUnitIdToBarcode(Boolean.valueOf(valueString));
|
400
|
}else if (keyString.equals("overwriteExistingSpecimens")){ //$NON-NLS-1$
|
401
|
configurator.setOverwriteExistingSpecimens(Boolean.valueOf(valueString));
|
402
|
}else if (keyString.equals("nomenclaturalCode")){ //$NON-NLS-1$
|
403
|
configurator.setNomenclaturalCode(NomenclaturalCode.fromString(valueString));
|
404
|
}else if (keyString.equals("getSiblings")){ //$NON-NLS-1$
|
405
|
configurator.setGetSiblings(Boolean.valueOf(valueString));
|
406
|
}else if (keyString.equals("removeCountryFromLocalityText")){ //$NON-NLS-1$
|
407
|
configurator.setRemoveCountryFromLocalityText(Boolean.valueOf(valueString));
|
408
|
}else if (keyString.equals("dnaSource")){ //$NON-NLS-1$
|
409
|
configurator.setDnaSoure(URI.create(valueString));
|
410
|
}
|
411
|
|
412
|
}
|
413
|
}
|
414
|
}
|
415
|
}
|
416
|
|
417
|
}
|