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taxeditor/eu.etaxonomy.taxeditor.molecular/src/main/java/eu/etaxonomy/taxeditor/molecular/handler @ 9a9359ce

Name Size
AbstractAlignmentEditorHandler.java 1.51 KB
AbstractFocusedAlignmentAreaHandler.java 780 Bytes
AbstractPherogramComponentHandler.java 2.17 KB
AlignmentEditorCopyHandler.java 2.04 KB
AlignmentEditorCutHandler.java 1.13 KB
AlignmentEditorPasteHandler.java 5.03 KB
ChangePherogramQualityOutputType.java 913 Bytes
CreateConsensusSequenceHandler.java 1.04 KB
CutPherogramLeftHandler.java 1.23 KB
CutPherogramRightHandler.java 1.24 KB
EditSequenceHandler.java 1.96 KB
ExportSequenceToFileHandler.java 4 KB
HandlerTools.java 1.2 KB
LoadPherogramHandler.java 2.87 KB
ReverseComplementHandler.java 911 Bytes
ShowPherogramHandler.java 2.41 KB
ToggleInsertOverwriteHandler.java 2.28 KB
ToggleLeftRightInsertionHandler.java 2.86 KB
ToggleShowPherogramBaseCallLinesHandler.java 826 Bytes
ToggleShowPherogramProbabilitiesHandler.java 1.11 KB
UpdateConsensusSequenceHandler.java 734 Bytes
package-info.java 590 Bytes

Latest revisions

# Date Author Comment
9a9359ce 11/14/2016 05:34 PM Ben Stöver

New JPhyloIO package now exported by molecular.lib.
SingleReadAlignmentPredicates renamed to SingleReadAlignmentRDFXMLConstants.
Pherogram alignment shifts are now written to single read export unsing a custom ObjectTranslator implementation.
c80496ea 10/26/2016 05:31 PM Ben Stöver

Merge branch 'LibrAlign' of https://dev.e-taxonomy.eu/git/taxeditor into LibrAlign

Conflicts:

eu.etaxonomy.taxeditor.molecular.lib/.classpath

eu.etaxonomy.taxeditor/rcp.target
e7fb4208 06/04/2016 12:47 PM Ben Stöver

Debug outputs removed.
Token set added to CDMSequenceMatrixAdapter.
01787847 06/02/2016 06:04 PM Ben Stöver

Debug output added to ExportSequenceToFileHandler.
Bug fix in CDMSequenceMatrixAdapter.
Typo correction.
b4979250 04/29/2016 08:23 PM Ben Stöver

Context menu entry for exporting alignment files added.
ExportSingleReadAlignmentHandler renamed to ExportSequenceToFileHandler.
76e5c721 04/29/2016 08:09 PM Ben Stöver

Exported packages of molecular plugin updated.
Basic export functionality for direct export of consensus sequence alignments implemented (untested).
43d3e0c8 04/28/2016 10:37 AM Patrick Plitzner

Fix dependencies and model update
0ed26a71 09/08/2015 04:00 PM Patrick Plitzner

Merge branch 'develop' into LibrAlign
fbd92259 09/02/2015 11:38 AM Ben Stöver

Implementation of AlignmentEditorPasteHandler changed.
ab9f98b3 09/02/2015 11:29 AM Ben Stöver

Paste action for AlignmentEditor added.

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