Revision 8ab41788
Added by Patrick Plitzner over 4 years ago
| eu.etaxonomy.taxeditor.editor/src/main/java/eu/etaxonomy/taxeditor/editor/descriptiveDataSet/matrix/CharacterMatrixBottomToolbar.java | ||
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import eu.etaxonomy.cdm.api.application.CdmApplicationState; |
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import eu.etaxonomy.cdm.api.service.IDescriptiveDataSetService; |
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import eu.etaxonomy.cdm.api.service.IPolytomousKeyService; |
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import eu.etaxonomy.cdm.api.service.ITaxonNodeService; |
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import eu.etaxonomy.cdm.api.service.ITaxonService; |
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import eu.etaxonomy.cdm.api.service.UpdateResult; |
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import eu.etaxonomy.cdm.api.service.config.DescriptionAggregationConfiguration; |
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import eu.etaxonomy.cdm.api.service.config.IdentifiableServiceConfiguratorImpl; |
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import eu.etaxonomy.cdm.api.service.dto.RowWrapperDTO; |
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import eu.etaxonomy.cdm.api.service.dto.SpecimenRowWrapperDTO; |
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import eu.etaxonomy.cdm.common.monitor.IRemotingProgressMonitor; |
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import eu.etaxonomy.cdm.model.description.CategoricalData; |
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import eu.etaxonomy.cdm.model.description.DescriptiveDataSet; |
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import eu.etaxonomy.cdm.model.description.Feature; |
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import eu.etaxonomy.cdm.model.description.PolytomousKey; |
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import eu.etaxonomy.cdm.model.description.QuantitativeData; |
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import eu.etaxonomy.cdm.model.taxon.Taxon; |
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import eu.etaxonomy.cdm.persistence.dto.SpecimenNodeWrapper; |
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import eu.etaxonomy.cdm.persistence.dto.TaxonNodeDto; |
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import eu.etaxonomy.cdm.strategy.generate.PolytomousKeyGenerator; |
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import eu.etaxonomy.cdm.strategy.generate.PolytomousKeyGeneratorConfigurator; |
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import eu.etaxonomy.taxeditor.editor.internal.TaxeditorEditorPlugin; |
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import eu.etaxonomy.taxeditor.editor.l10n.Messages; |
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import eu.etaxonomy.taxeditor.model.ImageResources; |
| ... | ... | |
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if(StoreUtil.promptCheckIsDirty(matrix.getPart())){
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return; |
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} |
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PolytomousKeyGeneratorConfigurator keyConfig = new PolytomousKeyGeneratorConfigurator(); |
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DescriptiveDataSet descriptiveDataSet = matrix.getDescriptiveDataSet(); |
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keyConfig.setDataSet(descriptiveDataSet); |
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PolytomousKey key = new PolytomousKeyGenerator().invoke(keyConfig); |
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IPolytomousKeyService keyService = CdmStore.getService(IPolytomousKeyService.class); |
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IdentifiableServiceConfiguratorImpl<PolytomousKey> serviceConfig= new IdentifiableServiceConfiguratorImpl<>(); |
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serviceConfig.setTitleSearchString(descriptiveDataSet.getTitleCache()); |
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List<PolytomousKey> list = keyService.findByTitle(serviceConfig).getRecords(); |
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if(list!=null){
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// TODO clear old key |
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System.out.println("Key with same name found for this data set found");
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} |
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key.setTitleCache(descriptiveDataSet.getTitleCache(), true); |
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Set<TaxonNodeDto> nodeDtos = matrix.getDescriptiveDataSet().getTaxonSubtreeFilter().stream() |
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.map(node->new TaxonNodeDto(node)) |
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.collect(Collectors.toSet()); |
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.map(node->new TaxonNodeDto(node))
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.collect(Collectors.toSet());
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TaxonNodeDto parentDto = CdmStore.getService(ITaxonNodeService.class).findCommonParentDto(nodeDtos); |
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UUID taxonUuid = parentDto.getTaxonUuid(); |
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int response = MessagingUtils.confirmDialog( |
| ... | ... | |
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} |
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taxonUuid = taxon.getUuid(); |
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} |
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key.addTaxonomicScope((Taxon) CdmStore.getService(ITaxonService.class).load(taxonUuid)); |
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key.print(System.out); |
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keyService.saveOrUpdate(key); |
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generateKey(matrix.getDescriptiveDataSet().getUuid(), taxonUuid); |
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} |
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}); |
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} |
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} |
| ... | ... | |
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job.schedule(); |
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} |
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private void generateKey(UUID datasetUuid, UUID taxonUuid) {
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UUID monitorUuid = CdmApplicationState.getLongRunningTasksService().generatePolytomousKey(datasetUuid, taxonUuid); |
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String jobLabel = "Generate polytomous key"; |
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Job job = Job.create(jobLabel, (ICoreRunnable) monitor -> {
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SubMonitor subMonitor = SubMonitor.convert(monitor); |
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subMonitor.beginTask(jobLabel, IProgressMonitor.UNKNOWN); |
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IRemotingProgressMonitor remotingMonitor; |
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try {
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remotingMonitor = CdmStore.getProgressMonitorClientManager() |
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.pollMonitor(jobLabel, |
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monitorUuid, |
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50, |
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null, |
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(List)null, |
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subMonitor); |
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Object resultObject = remotingMonitor.getResult(); |
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if(resultObject instanceof Exception){
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MessagingUtils.errorDialog("Key generation failed", this, "Generating the polytomous key was not successfull", TaxeditorEditorPlugin.PLUGIN_ID, (Exception)resultObject, true, true);
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} |
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} catch (InterruptedException e) {
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return; |
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} |
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monitor.done(); |
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}); |
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job.schedule(); |
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} |
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private void aggregateCharts() {
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new Job("aggregate charts") {
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Also available in: Unified diff
ref #8450 Move key generation to long running task