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/**
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* Copyright (C) 2018 EDIT
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* European Distributed Institute of Taxonomy
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* http://www.e-taxonomy.eu
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*
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* The contents of this file are subject to the Mozilla Public License Version 1.1
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* See LICENSE.TXT at the top of this package for the full license terms.
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*/
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package eu.etaxonomy.taxeditor.databaseAdmin.preferencePage;
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import org.eclipse.swt.SWT;
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import org.eclipse.swt.custom.CLabel;
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import org.eclipse.swt.events.SelectionAdapter;
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import org.eclipse.swt.events.SelectionEvent;
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import org.eclipse.swt.events.SelectionListener;
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import org.eclipse.swt.layout.GridData;
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import org.eclipse.swt.layout.GridLayout;
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import org.eclipse.swt.widgets.Button;
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import org.eclipse.swt.widgets.Combo;
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import org.eclipse.swt.widgets.Composite;
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import org.eclipse.swt.widgets.Control;
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import eu.etaxonomy.cdm.api.application.ICdmRepository;
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import eu.etaxonomy.cdm.api.service.IPreferenceService;
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import eu.etaxonomy.cdm.io.specimen.abcd206.in.Abcd206ImportConfigurator;
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import eu.etaxonomy.cdm.model.metadata.CdmPreference;
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import eu.etaxonomy.cdm.model.metadata.CdmPreference.PrefKey;
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import eu.etaxonomy.cdm.model.metadata.PreferenceSubject;
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import eu.etaxonomy.cdm.model.name.NomenclaturalCode;
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import eu.etaxonomy.taxeditor.l10n.Messages;
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import eu.etaxonomy.taxeditor.preference.EditorPreferencePredicate;
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import eu.etaxonomy.taxeditor.preference.PreferencesUtil;
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import eu.etaxonomy.taxeditor.preference.menu.CdmPreferencePage;
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import eu.etaxonomy.taxeditor.store.CdmStore;
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/**
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* @author k.luther
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* @since 23.03.2018
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*
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*/
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public class AbcdImportPreference extends CdmPreferencePage implements IE4AdminPreferencePage, SelectionListener {
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private Abcd206ImportConfigurator configurator;
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private Combo nomenclaturalCodeSelectionCombo;
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private boolean allowOverride = true;
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private CdmPreference preference = null;
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@Override
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protected Control createContents(Composite parent) {
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final Composite composite = new Composite(parent, SWT.NULL);
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GridLayout gridLayout = new GridLayout();
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composite.setLayout(gridLayout);
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configurator = Abcd206ImportConfigurator.NewInstance(null,null);
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ICdmRepository controller;
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controller = CdmStore.getCurrentApplicationConfiguration();
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PrefKey key = CdmPreference.NewKey(PreferenceSubject.NewTaxEditorInstance(), EditorPreferencePredicate.AbcdImportConfig);
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if (controller == null){
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return null;
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}
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preference = controller.getPreferenceService().find(key);
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if (preference != null ){
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allowOverride = preference.isAllowOverride();
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}else{
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preference = CdmPreference.NewTaxEditorInstance(EditorPreferencePredicate.AbcdImportConfig, configurator.toString());
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}
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if (preference != null){
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String configString = preference.getValue();
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String[] configArray = configString.split(";"); //$NON-NLS-1$
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for (String configItem: configArray){
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String[] keyValue = configItem.split(":"); //$NON-NLS-1$
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if(keyValue.length==2){
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String keyString = keyValue[0];
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String valueString = keyValue[1];
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if (keyString.equals("ignoreImportOfExistingSpecimen")){ //$NON-NLS-1$
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configurator.setIgnoreImportOfExistingSpecimen(Boolean.valueOf(valueString));
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}else if (keyString.equals("addIndividualsAssociationsSuchAsSpecimenAndObservations")){ //$NON-NLS-1$
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configurator.setAddIndividualsAssociationsSuchAsSpecimenAndObservations(Boolean.valueOf(valueString));
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}else if (keyString.equals("reuseExistingTaxaWhenPossible")){ //$NON-NLS-1$
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configurator.setReuseExistingTaxaWhenPossible(Boolean.valueOf(valueString));
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}else if (keyString.equals("ignoreAuthorship")){ //$NON-NLS-1$
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configurator.setIgnoreAuthorship(Boolean.valueOf(valueString));
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}else if (keyString.equals("addMediaAsMediaSpecimen")){ //$NON-NLS-1$
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configurator.setAddMediaAsMediaSpecimen(Boolean.valueOf(valueString));
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}else if (keyString.equals("reuseExistingMetaData")){ //$NON-NLS-1$
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configurator.setReuseExistingMetaData(Boolean.valueOf(valueString));
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}else if (keyString.equals("reuseExistingDescriptiveGroups")){ //$NON-NLS-1$
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configurator.setReuseExistingDescriptiveGroups(Boolean.valueOf(valueString));
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}else if (keyString.equals("allowReuseOtherClassifications")){ //$NON-NLS-1$
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configurator.setAllowReuseOtherClassifications(Boolean.valueOf(valueString));
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}else if (keyString.equals("deduplicateReferences")){ //$NON-NLS-1$
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configurator.setDeduplicateReferences(Boolean.valueOf(valueString));
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}else if (keyString.equals("deduplicateClassifications")){ //$NON-NLS-1$
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configurator.setDeduplicateClassifications(Boolean.valueOf(valueString));
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}else if (keyString.equals("moveNewTaxaToDefaultClassification")){ //$NON-NLS-1$
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configurator.setMoveNewTaxaToDefaultClassification(Boolean.valueOf(valueString));
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}else if (keyString.equals("mapUnitIdToCatalogNumber")){ //$NON-NLS-1$
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configurator.setMapUnitIdToCatalogNumber(Boolean.valueOf(valueString));
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}else if (keyString.equals("mapUnitIdToAccessionNumber")){ //$NON-NLS-1$
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configurator.setMapUnitIdToAccessionNumber(Boolean.valueOf(valueString));
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}else if (keyString.equals("mapUnitIdToBarcode")){ //$NON-NLS-1$
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configurator.setMapUnitIdToBarcode(Boolean.valueOf(valueString));
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}else if (keyString.equals("overwriteExistingSpecimens")){ //$NON-NLS-1$
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configurator.setOverwriteExistingSpecimens(Boolean.valueOf(valueString));
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}else if (keyString.equals("nomenclaturalCode")){ //$NON-NLS-1$
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configurator.setNomenclaturalCode(NomenclaturalCode.fromString(valueString));
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}else if (keyString.equals("getSiblings")){ //$NON-NLS-1$
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configurator.setGetSiblings(Boolean.valueOf(valueString));
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}else if (keyString.equals("removeCountryFromLocalityText")){ //$NON-NLS-1$
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configurator.setRemoveCountryFromLocalityText(Boolean.valueOf(valueString));
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}
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}
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}
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}
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//configurator = PreferencesUtil.getAbcdImportConfigurationPreference();
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final CLabel description = new CLabel(composite, SWT.NULL);
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description.setText(Messages.AbcdImportPreference_description);
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Button checkBoxMediaSpecimen = new Button(composite, SWT.CHECK);
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checkBoxMediaSpecimen.setSelection(configurator.isAddMediaAsMediaSpecimen());
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checkBoxMediaSpecimen.setText(Messages.AbcdImportPreference_media_as_mediaSpecimen);
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checkBoxMediaSpecimen
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.setToolTipText(Messages.AbcdImportPreference_media_as_subUnit);
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checkBoxMediaSpecimen.addSelectionListener(new SelectionAdapter() {
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@Override
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public void widgetSelected(SelectionEvent e) {
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configurator.setAddMediaAsMediaSpecimen(!configurator.isAddMediaAsMediaSpecimen());
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}
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});
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Button checkBoxIgnoreExisting = new Button(composite, SWT.CHECK);
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checkBoxIgnoreExisting.setSelection(configurator.isIgnoreImportOfExistingSpecimen());
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checkBoxIgnoreExisting.setText(Messages.AbcdImportPreference_not_import_existing_specimen);
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checkBoxIgnoreExisting
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.setToolTipText(Messages.AbcdImportPreference_not_import_existing_specimen_tooltip);
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checkBoxIgnoreExisting.addSelectionListener(new SelectionAdapter() {
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@Override
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public void widgetSelected(SelectionEvent e) {
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configurator.setIgnoreImportOfExistingSpecimen(!configurator.isIgnoreImportOfExistingSpecimen());
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}
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});
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Button checkBoxIgnoreAuthorship = new Button(composite, SWT.CHECK);
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checkBoxIgnoreAuthorship.setSelection(configurator.isIgnoreAuthorship());
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checkBoxIgnoreAuthorship.setText(Messages.AbcdImportPreference_ignore_author);
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checkBoxIgnoreAuthorship
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.setToolTipText(Messages.AbcdImportPreference_ignore_author_tooltip);
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checkBoxIgnoreAuthorship.addSelectionListener(new SelectionAdapter() {
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@Override
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public void widgetSelected(SelectionEvent e) {
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configurator.setIgnoreAuthorship(!configurator.isIgnoreAuthorship());
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}
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});
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Button checkBoxMapUnitIdToCatalogNumber = new Button(composite, SWT.CHECK);
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checkBoxMapUnitIdToCatalogNumber.setSelection(configurator.isMapUnitIdToCatalogNumber());
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checkBoxMapUnitIdToCatalogNumber.setText(Messages.AbcdImportPreference_map_unit_nr_catalog_number);
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checkBoxMapUnitIdToCatalogNumber
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.setToolTipText(Messages.AbcdImportPreference_map_unit_number_catalog_number_tooltip);
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checkBoxMapUnitIdToCatalogNumber.addSelectionListener(new SelectionAdapter() {
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@Override
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public void widgetSelected(SelectionEvent e) {
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configurator.setMapUnitIdToCatalogNumber(!configurator.isMapUnitIdToCatalogNumber());
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}
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});
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//TODO: only one of the mappings can be checked!
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Button checkBoxMapUnitIdToAccessionNumber = new Button(composite, SWT.CHECK);
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checkBoxMapUnitIdToAccessionNumber.setSelection(configurator.isMapUnitIdToAccessionNumber());
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checkBoxMapUnitIdToAccessionNumber.setText(Messages.AbcdImportPreference_map_unit_number_to_accession_number);
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checkBoxMapUnitIdToAccessionNumber
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.setToolTipText(Messages.AbcdImportPreference_map_unit_number_accession_number_tooltip);
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checkBoxMapUnitIdToAccessionNumber.addSelectionListener(new SelectionAdapter() {
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@Override
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public void widgetSelected(SelectionEvent e) {
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configurator.setMapUnitIdToAccessionNumber(!configurator.isMapUnitIdToAccessionNumber());
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}
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});
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Button checkBoxMapUnitIdToBarcode = new Button(composite, SWT.CHECK);
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checkBoxMapUnitIdToBarcode.setSelection(configurator.isMapUnitIdToBarcode());
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checkBoxMapUnitIdToBarcode.setText(Messages.AbcdImportPreference_map_unit_number_barcode);
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checkBoxMapUnitIdToBarcode
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.setToolTipText(Messages.AbcdImportPreference_map_unit_number_barcode_tooltip);
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checkBoxMapUnitIdToBarcode.addSelectionListener(new SelectionAdapter() {
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@Override
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public void widgetSelected(SelectionEvent e) {
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configurator.setMapUnitIdToBarcode(!configurator.isMapUnitIdToBarcode());
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}
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});
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Button checkBoxRemoveCountry = new Button(composite, SWT.CHECK);
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checkBoxRemoveCountry.setSelection(configurator.isRemoveCountryFromLocalityText());
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checkBoxRemoveCountry.setText(Messages.AbcdImportPreference_remove_country_from_locality);
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checkBoxRemoveCountry
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.setToolTipText(Messages.AbcdImportPreference_remove_country_from_locality_tooltip);
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checkBoxRemoveCountry.addSelectionListener(new SelectionAdapter() {
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@Override
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public void widgetSelected(SelectionEvent e) {
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configurator.setRemoveCountryFromLocalityText(!configurator.isRemoveCountryFromLocalityText());
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}
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});
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Button checkBoxMoveToDefaultClassification = new Button(composite, SWT.CHECK);
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checkBoxMoveToDefaultClassification.setSelection(configurator.isMoveNewTaxaToDefaultClassification());
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checkBoxMoveToDefaultClassification.setText(Messages.AbcdImportPreference_create_new_classification_new_taxa);
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checkBoxMoveToDefaultClassification
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.setToolTipText(Messages.AbcdImportPreference_create_new_classification_new_taxa_tooltip);
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checkBoxMoveToDefaultClassification.addSelectionListener(new SelectionAdapter() {
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@Override
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public void widgetSelected(SelectionEvent e) {
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configurator.setMoveNewTaxaToDefaultClassification(!configurator.isMoveNewTaxaToDefaultClassification());
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}
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});
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Button checkBoxImportSiblings = new Button(composite, SWT.CHECK);
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checkBoxImportSiblings.setSelection(configurator.isGetSiblings());
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checkBoxImportSiblings.setText(Messages.AbcdImportPreference_import_all_children_for_cultures_or_tissues);
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checkBoxImportSiblings
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.setToolTipText(Messages.AbcdImportPreference_import_all_children_for_cultures_or_tissues_tooltip);
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checkBoxImportSiblings.addSelectionListener(new SelectionAdapter() {
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@Override
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public void widgetSelected(SelectionEvent e) {
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configurator.setGetSiblings(!configurator.isGetSiblings());
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}
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});
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Button checkBoxAddIndividualsAssociations = new Button(composite, SWT.CHECK);
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checkBoxAddIndividualsAssociations.setSelection(configurator.isAddIndividualsAssociationsSuchAsSpecimenAndObservations());
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checkBoxAddIndividualsAssociations.setText(Messages.AbcdImportPreference_create_Individual_Association);
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checkBoxAddIndividualsAssociations
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.setToolTipText(Messages.AbcdImportPreference_create_Individual_Association_tooltip);
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checkBoxAddIndividualsAssociations.addSelectionListener(new SelectionAdapter() {
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@Override
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public void widgetSelected(SelectionEvent e) {
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configurator.setAddIndividualsAssociationsSuchAsSpecimenAndObservations(!configurator.isAddIndividualsAssociationsSuchAsSpecimenAndObservations());
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}
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});
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Button checkBoxReuseDescriptiveGroups = new Button(composite, SWT.CHECK);
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checkBoxReuseDescriptiveGroups.setSelection(configurator.isReuseExistingDescriptiveGroups());
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checkBoxReuseDescriptiveGroups.setText(Messages.AbcdImportPreference_reuse_descriptive_group);
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checkBoxReuseDescriptiveGroups
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.setToolTipText(Messages.AbcdImportPreference_reuse_descriptive_group_tooltip);
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checkBoxReuseDescriptiveGroups.addSelectionListener(new SelectionAdapter() {
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@Override
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public void widgetSelected(SelectionEvent e) {
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configurator.setReuseExistingDescriptiveGroups(!configurator.isReuseExistingDescriptiveGroups());
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}
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});
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Button checkBoxReuseExistingTaxa = new Button(composite, SWT.CHECK);
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checkBoxReuseExistingTaxa.setSelection(configurator.isReuseExistingTaxaWhenPossible());
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checkBoxReuseExistingTaxa.setText(Messages.AbcdImportPreference_reuse_existing_taxa);
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checkBoxReuseExistingTaxa
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.setToolTipText(Messages.AbcdImportPreference_reuse_existing_taxa_tooltip);
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checkBoxReuseExistingTaxa.addSelectionListener(new SelectionAdapter() {
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@Override
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public void widgetSelected(SelectionEvent e) {
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configurator.setReuseExistingTaxaWhenPossible(!configurator.isReuseExistingTaxaWhenPossible());
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}
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});
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GridData gridData = new GridData();
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gridData = new GridData(GridData.BEGINNING, GridData.CENTER, true, false);
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gridData.horizontalIndent = 5;
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// classificationSelection.setLayoutData(gridData);
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nomenclaturalCodeSelectionCombo = new Combo(composite, SWT.BORDER| SWT.READ_ONLY);
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nomenclaturalCodeSelectionCombo.setLayoutData(gridData);
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for(NomenclaturalCode code: NomenclaturalCode.values()){
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nomenclaturalCodeSelectionCombo.add(code.getKey());
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}
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int index = 0;
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if (configurator.getNomenclaturalCode() != null){
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for (String label : nomenclaturalCodeSelectionCombo.getItems()){
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if (label.equals(configurator.getNomenclaturalCode().getKey())){
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nomenclaturalCodeSelectionCombo.select(index);
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}
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index++;
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}
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}
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// TODO remember last selection
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nomenclaturalCodeSelectionCombo.addSelectionListener(this);
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if (preference != null){
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allowOverride = preference.isAllowOverride();
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}
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Button checkAllowOverride = new Button(composite, SWT.CHECK);
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checkAllowOverride.setSelection(allowOverride);
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checkAllowOverride.setText(Messages.AbcdImportPreference_allow_override);
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checkAllowOverride
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.setToolTipText(Messages.AbcdImportPreference_allow_override_tooltip);
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checkAllowOverride.addSelectionListener(new SelectionAdapter() {
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@Override
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public void widgetSelected(SelectionEvent e) {
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allowOverride = !allowOverride;
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}
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308
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});
|
|
309
|
|
|
310
|
return composite;
|
|
311
|
}
|
|
312
|
|
|
313
|
@Override
|
|
314
|
public void widgetSelected(SelectionEvent e) {
|
|
315
|
this.configurator.setNomenclaturalCode(NomenclaturalCode.getByKey(nomenclaturalCodeSelectionCombo.getText()));
|
|
316
|
|
|
317
|
}
|
|
318
|
|
|
319
|
@Override
|
|
320
|
public boolean performOk() {
|
|
321
|
if (preference == null){
|
|
322
|
return true;
|
|
323
|
}
|
|
324
|
if (configurator != null){
|
|
325
|
String configString = configurator.toString();
|
|
326
|
|
|
327
|
CdmPreference pref = CdmPreference.NewTaxEditorInstance(EditorPreferencePredicate.AbcdImportConfig, configString);
|
|
328
|
pref.setAllowOverride(allowOverride);
|
|
329
|
|
|
330
|
ICdmRepository controller = CdmStore.getCurrentApplicationConfiguration();
|
|
331
|
if (controller == null){
|
|
332
|
return false;
|
|
333
|
}
|
|
334
|
IPreferenceService service = controller.getPreferenceService();
|
|
335
|
service.set(pref);
|
|
336
|
PreferencesUtil.updateDBPreferences();
|
|
337
|
|
|
338
|
}
|
|
339
|
return true;
|
|
340
|
}
|
|
341
|
|
|
342
|
/**
|
|
343
|
* {@inheritDoc}
|
|
344
|
*/
|
|
345
|
@Override
|
|
346
|
public void widgetDefaultSelected(SelectionEvent e) {
|
|
347
|
// TODO Auto-generated method stub
|
|
348
|
|
|
349
|
}
|
|
350
|
|
|
351
|
// private void createAbcdImportConfig() {
|
|
352
|
// this.configurator.setAddIndividualsAssociationsSuchAsSpecimenAndObservations(doGetPreferenceStore().getBoolean(IPreferenceKeys.ABCD_IMPORT_CONFIGURATOR_ADD_INDIVIDUALS_ASSOCIATIONS_SUCH_AS_SPECIMEN_AND_OBSERVATIONS));
|
|
353
|
// this.configurator.setAddMediaAsMediaSpecimen(doGetPreferenceStore().getBoolean(IPreferenceKeys.ABCD_IMPORT_CONFIGURATOR_ADD_MEDIA_AS_MEDIASPECIMEN));
|
|
354
|
// this.configurator.setAllowReuseOtherClassifications(doGetPreferenceStore().getBoolean(IPreferenceKeys.ABCD_IMPORT_CONFIGURATOR_ALLOW_REUSE_OTHER_CLASSIFICATIONS));
|
|
355
|
// //this.abcdImportConfigurator.setClassificationUuid(doGetPreferenceStore().getBoolean(IPreferenceKeys.ABCD_IMPORT_CONFIGURATOR_CLASSIFICATION_UUID));
|
|
356
|
// this.configurator.setDeduplicateClassifications(doGetPreferenceStore().getBoolean(IPreferenceKeys.ABCD_IMPORT_CONFIGURATOR_DEDUPLICATE_CLASSIFICATIONS));
|
|
357
|
// this.configurator.setDeduplicateReferences(doGetPreferenceStore().getBoolean(IPreferenceKeys.ABCD_IMPORT_CONFIGURATOR_DEDUPLICATE_REFERENCES));
|
|
358
|
// // this.abcdImportConfigurator.setDefaultAuthor(doGetPreferenceStore().getBoolean(IPreferenceKeys.ABCD_IMPORT_CONFIGURATOR_DEFAULT_AUTHOR));
|
|
359
|
// this.configurator.setGetSiblings(doGetPreferenceStore().getBoolean(IPreferenceKeys.ABCD_IMPORT_CONFIGURATOR_DO_SIBLINGS));
|
|
360
|
// this.configurator.setIgnoreAuthorship(doGetPreferenceStore().getBoolean(IPreferenceKeys.ABCD_IMPORT_CONFIGURATOR_IGNORE_AUTHORSHIP));
|
|
361
|
// this.configurator.setIgnoreImportOfExistingSpecimen(doGetPreferenceStore().getBoolean(IPreferenceKeys.ABCD_IMPORT_CONFIGURATOR_IGNORE_IMPORT_OF_EXISTING_SPECIMEN));
|
|
362
|
// this.configurator.setMapUnitIdToAccessionNumber(doGetPreferenceStore().getBoolean(IPreferenceKeys.ABCD_IMPORT_CONFIGURATOR_MAP_UNIT_ID_TO_ACCESSION_NUMBER));
|
|
363
|
// this.configurator.setMapUnitIdToBarcode(doGetPreferenceStore().getBoolean(IPreferenceKeys.ABCD_IMPORT_CONFIGURATOR_MAP_UNIT_ID_TO_BARCODE));
|
|
364
|
// this.configurator.setMapUnitIdToCatalogNumber(doGetPreferenceStore().getBoolean(IPreferenceKeys.ABCD_IMPORT_CONFIGURATOR_MAP_UNIT_ID_TOCATALOG_NUMBER));
|
|
365
|
// this.configurator.setMoveNewTaxaToDefaultClassification(doGetPreferenceStore().getBoolean(IPreferenceKeys.ABCD_IMPORT_CONFIGURATOR_MOVE_NEW_TAXA_TO_DEFAULT_CLASSIFICATION));
|
|
366
|
// this.configurator.setReuseExistingDescriptiveGroups(doGetPreferenceStore().getBoolean(IPreferenceKeys.ABCD_IMPORT_CONFIGURATOR_REUSE_EXISTING_DESCRIPTIVE_GROUPS));
|
|
367
|
// this.configurator.setReuseExistingTaxaWhenPossible(doGetPreferenceStore().getBoolean(IPreferenceKeys.ABCD_IMPORT_CONFIGURATOR_REUSE_EXISTING_TAXA_WHEN_POSSIBLE));
|
|
368
|
// this.configurator.setNomenclaturalCode(PreferencesUtil.getPreferredNomenclaturalCode(doGetPreferenceStore().getString(IPreferenceKeys.ABCD_IMPORT_CONFIGURATOR_NOMENCLATURAL_CODE)));
|
|
369
|
//
|
|
370
|
// }
|
|
371
|
|
|
372
|
}
|