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// $Id$
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/**
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* Copyright (C) 2007 EDIT
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* European Distributed Institute of Taxonomy
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* http://www.e-taxonomy.eu
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*
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* The contents of this file are subject to the Mozilla Public License Version 1.1
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* See LICENSE.TXT at the top of this package for the full license terms.
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*/
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package eu.etaxonomy.taxeditor.store;
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import java.util.ArrayList;
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import java.util.Collections;
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import java.util.Comparator;
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import java.util.List;
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import eu.etaxonomy.cdm.api.service.ITermService;
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import eu.etaxonomy.cdm.hibernate.HibernateProxyHelper;
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import eu.etaxonomy.cdm.model.common.AnnotationType;
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import eu.etaxonomy.cdm.model.common.DefinedTermBase;
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import eu.etaxonomy.cdm.model.common.ExtensionType;
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import eu.etaxonomy.cdm.model.common.Language;
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import eu.etaxonomy.cdm.model.common.MarkerType;
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import eu.etaxonomy.cdm.model.common.OrderedTermBase;
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import eu.etaxonomy.cdm.model.common.OrderedTermVocabulary;
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import eu.etaxonomy.cdm.model.common.TermVocabulary;
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import eu.etaxonomy.cdm.model.common.VocabularyEnum;
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import eu.etaxonomy.cdm.model.description.AbsenceTerm;
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import eu.etaxonomy.cdm.model.description.Feature;
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import eu.etaxonomy.cdm.model.description.MeasurementUnit;
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import eu.etaxonomy.cdm.model.description.Modifier;
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import eu.etaxonomy.cdm.model.description.PresenceAbsenceTermBase;
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import eu.etaxonomy.cdm.model.description.PresenceTerm;
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import eu.etaxonomy.cdm.model.description.Scope;
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import eu.etaxonomy.cdm.model.description.Stage;
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import eu.etaxonomy.cdm.model.description.State;
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import eu.etaxonomy.cdm.model.description.StatisticalMeasure;
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import eu.etaxonomy.cdm.model.location.NamedAreaType;
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import eu.etaxonomy.cdm.model.location.ReferenceSystem;
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import eu.etaxonomy.cdm.model.media.RightsTerm;
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import eu.etaxonomy.cdm.model.name.NameRelationshipType;
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import eu.etaxonomy.cdm.model.name.NameTypeDesignationStatus;
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import eu.etaxonomy.cdm.model.name.NomenclaturalStatusType;
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import eu.etaxonomy.cdm.model.name.Rank;
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import eu.etaxonomy.cdm.model.name.SpecimenTypeDesignationStatus;
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import eu.etaxonomy.cdm.model.occurrence.DeterminationModifier;
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import eu.etaxonomy.cdm.model.occurrence.PreservationMethod;
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import eu.etaxonomy.cdm.model.taxon.TaxonRelationshipType;
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import eu.etaxonomy.taxeditor.preference.PreferencesUtil;
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/**
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* All terms may be accessed through this store.
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* Note: This is for internal use. When using vocabularies in the UI, try to use the preferred terms from
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* PreferenceUtil
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*
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* @author n.hoffmann
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* @created 25.06.2009
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* @version 1.0
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*/
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public class TermStore {
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/**
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* <p>getSpecimenTypeDesignationStatus</p>
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*
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* @return a {@link java.util.List} object.
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*/
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public static List<SpecimenTypeDesignationStatus> getSpecimenTypeDesignationStatus() {
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return getTerms(SpecimenTypeDesignationStatus.class);
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}
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/**
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* <p>getNameTypeDesignationStatus</p>
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*
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* @return a {@link java.util.List} object.
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*/
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public static List<NameTypeDesignationStatus> getNameTypeDesignationStatus() {
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return getTerms(NameTypeDesignationStatus.class);
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}
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/**
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* <p>getNamedAreaTypes</p>
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*
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* @return a {@link java.util.List} object.
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*/
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public static List<NamedAreaType> getNamedAreaTypes(){
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return getTerms(NamedAreaType.class);
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}
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/**
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* <p>getAnnotationTypes</p>
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*
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* @return a {@link java.util.List} object.
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*/
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public static List<AnnotationType> getAnnotationTypes(){
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return getTerms(AnnotationType.class);
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}
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/**
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* <p>getTaxonRelationshipTypes</p>
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*
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* @return a {@link java.util.List} object.
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*/
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public static List<TaxonRelationshipType> getTaxonRelationshipTypes(){
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return getTerms(TaxonRelationshipType.class);
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}
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/**
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* <p>getLanguages</p>
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*
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* @return a {@link java.util.List} object.
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*/
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public static List<Language> getLanguages(){
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return getTerms(Language.class);
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}
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/**
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* <p>getFeatures</p>
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*
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* @return a {@link java.util.List} object.
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*/
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public static List<Feature> getFeatures() {
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List<Feature> features = getTerms(Feature.class);
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features.remove(Feature.IMAGE());
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return features;
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}
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/**
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* <p>getNameRelationshipTypes</p>
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*
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* @return a {@link java.util.List} object.
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*/
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public static List<NameRelationshipType> getNameRelationshipTypes() {
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return getTerms(NameRelationshipType.class);
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}
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/**
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* <p>getNomenclaturalStatusTypes</p>
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*
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* @return a {@link java.util.List} object.
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*/
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public static List<NomenclaturalStatusType> getNomenclaturalStatusTypes(){
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return getTerms(NomenclaturalStatusType.class);
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}
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/**
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* <p>getNonTechnicalMarkerTypes</p>
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*
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* @return a {@link java.util.List} object.
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*/
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public static List<MarkerType> getNonTechnicalMarkerTypes() {
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List<MarkerType> nonTechnicalMarkerTypes = new ArrayList<MarkerType>();
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List<MarkerType> markerTypes = getTerms(MarkerType.class);
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for (Object type : markerTypes) {
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if (((MarkerType) type).isTechnical() == false) {
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nonTechnicalMarkerTypes.add((MarkerType) type);
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}
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}
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return nonTechnicalMarkerTypes;
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}
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/**
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* <p>getExtensionTypes</p>
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*
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* @return a {@link java.util.List} object.
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*/
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public static List<ExtensionType> getExtensionTypes() {
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return getTerms(ExtensionType.class);
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}
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/**
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* <p>getRightsTypes</p>
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*
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* @return a {@link java.util.List} object.
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*/
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public static List<RightsTerm> getRightsTypes() {
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return getTerms(RightsTerm.class);
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}
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/**
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* Retrieve all ranks from data store.
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*
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* @return a {@link java.util.List} object.
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*/
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public static List<Rank> getRanks(){
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if(PreferencesUtil.getSortRanksHierarchichally()){
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return getTerms(Rank.class, new Comparator<Rank>(){
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@Override
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public int compare(Rank o1, Rank o2) {
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return o1.compareTo(o2);
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}
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});
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}else{
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return getTerms(Rank.class);
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}
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}
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/**
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* Retrieve all presence and absence terms from data store.
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*
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* @return a {@link java.util.List} object.
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*/
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public static List<PresenceAbsenceTermBase> getPresenceAbsenceTerms() {
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List presenceAbsenceTerms = getTerms(PresenceTerm.class);
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presenceAbsenceTerms.addAll(getTerms(AbsenceTerm.class));
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return presenceAbsenceTerms;
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}
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/**
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* Retrieve all stages from data store.
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*
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* @return a {@link java.util.List} object.
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*/
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public static List<Stage> getStages(){
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return getTerms(Stage.class);
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}
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/**
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* Retrieve all states from data store.
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*
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* @return a {@link java.util.List} object.
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*/
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public static List<State> getStates() {
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return getTerms(State.class);
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}
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/**
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* Retrieve all preservation methods from data store.
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*
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* @return a {@link java.util.List} object.
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*/
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public static List<PreservationMethod> getPreservationMethods(){
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return getTerms(PreservationMethod.class);
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}
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/**
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* <p>getMeasurementUnits</p>
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*
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* @return a {@link java.util.List} object.
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*/
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public static List<MeasurementUnit> getMeasurementUnits() {
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return getTerms(MeasurementUnit.class);
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}
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/**
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* <p>getModifiers</p>
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*
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* @return a {@link java.util.List} object.
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*/
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public static List<Modifier> getModifiers() {
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return getTerms(Modifier.class);
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}
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/**
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* <p>getStatisticalMeasures</p>
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*
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* @return a {@link java.util.List} object.
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*/
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public static List<StatisticalMeasure> getStatisticalMeasures() {
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return getTerms(StatisticalMeasure.class);
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}
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/**
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* <p>getScopes</p>
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*
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* @return a {@link java.util.List} object.
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*/
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public static List<Scope> getScopes() {
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return getTerms(Scope.class);
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}
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/**
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* <p>getDeterminationModifiers</p>
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*
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* @return a {@link java.util.List} object.
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*/
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public static List<DeterminationModifier> getDeterminationModifiers() {
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return getTerms(DeterminationModifier.class);
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}
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/**
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* <p>getReferenceSystems</p>
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*
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* @return a {@link java.util.List} object.
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*/
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public static List<ReferenceSystem> getReferenceSystems() {
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return getTerms(ReferenceSystem.class);
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}
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/**
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************* save methods *****************************
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*
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* @param term a {@link eu.etaxonomy.cdm.model.common.DefinedTermBase} object.
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*/
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public static void saveTerm(DefinedTermBase term){
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getTermService().saveOrUpdate(term);
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}
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/**
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* <p>delete</p>
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*
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* @param selected a {@link eu.etaxonomy.cdm.model.common.DefinedTermBase} object.
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*/
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public static void delete(DefinedTermBase selected) {
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getTermService().delete(selected);
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}
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/**
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* Save a vacabulary to data store
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*
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* @param term a {@link eu.etaxonomy.cdm.model.common.DefinedTermBase} object.
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*/
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public static void updateVocabulary(DefinedTermBase term) {
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getTermService().saveOrUpdate(term);
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}
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/*************** internal methods **************************/
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private static Language getDefaultLanguage(){
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return CdmStore.getDefaultLanguage();
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}
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private static OrderedTermVocabulary<? extends OrderedTermBase> getOrderedTermVocabulary(VocabularyEnum vocabularyType){
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TermVocabulary<DefinedTermBase> vocabulary = getTermVocabulary(vocabularyType);
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return HibernateProxyHelper.deproxy(vocabulary, OrderedTermVocabulary.class);
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}
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/**
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* <p>getTermVocabulary</p>
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*
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* @param vocabularyType a {@link eu.etaxonomy.cdm.model.common.VocabularyEnum} object.
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* @return a {@link eu.etaxonomy.cdm.model.common.TermVocabulary} object.
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*/
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public static TermVocabulary<DefinedTermBase> getTermVocabulary(VocabularyEnum vocabularyType){
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return CdmStore.getVocabularyService().getVocabulary(vocabularyType);
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}
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private static <TERM extends DefinedTermBase> List<TERM> getTerms(Class<TERM> clazz){
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Comparator<TERM> comparator = new Comparator<TERM>() {
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@Override
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public int compare(TERM o1, TERM o2) {
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String label1 = o1.getLabel(getDefaultLanguage()) != null ? o1.getLabel(getDefaultLanguage()) : o1.getTitleCache();
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String label2 = o2.getLabel(getDefaultLanguage()) != null ? o2.getLabel(getDefaultLanguage()) : o2.getTitleCache();
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return label1.compareTo(label2);
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}
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};
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return getTerms(clazz, comparator);
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}
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private static <TERM extends DefinedTermBase> List<TERM> getTerms(Class<TERM> clazz, Comparator<TERM> comparator){
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List<TERM> terms = new ArrayList<TERM>();
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if(getTermService() != null){
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terms = getTermService().listByTermClass(clazz, null, null, null, null);
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Collections.sort(terms, comparator);
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}
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return terms;
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}
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private static ITermService getTermService(){
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return CdmStore.getTermService();
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}
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}
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