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<project>
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<modelVersion>4.0.0</modelVersion>
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<groupId>eu.etaxonomy.taxeditor</groupId>
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<artifactId>eu.etaxonomy.taxeditor.molecular.lib</artifactId>
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<packaging>eclipse-plugin</packaging>
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<parent>
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<groupId>eu.etaxonomy</groupId>
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<artifactId>taxeditor-parent</artifactId>
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<version>4.0.0-SNAPSHOT</version>
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</parent>
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<build>
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<plugins>
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<plugin>
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<groupId>org.apache.maven.plugins</groupId>
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<artifactId>maven-dependency-plugin</artifactId>
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<version>2.4</version>
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<executions>
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<execution>
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<id>copy-dependencies</id>
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<phase>validate</phase>
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<goals>
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<goal>copy-dependencies</goal>
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</goals>
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<configuration>
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<includeArtifactIds>libralign-swt, libralign-core,
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bioinfweb-commons-swt, bioinfweb-commons-core,
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bioinfweb-commons-bio, bioinfweb-commons-swing,
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tic-core, libralign-biojava1, core, sequencing,
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tic-swt, jphyloio-core, owlapi-xmlutils</includeArtifactIds>
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<outputDirectory>lib</outputDirectory>
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<overWriteReleases>true</overWriteReleases>
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<overWriteSnapshots>true</overWriteSnapshots>
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<excludeTransitive>true</excludeTransitive>
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</configuration>
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</execution>
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<!-- <execution> -->
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<!-- <id>copy-dependencies-sources</id> -->
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<!-- <phase>validate</phase> -->
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<!-- <goals> -->
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<!-- <goal>copy-dependencies</goal> -->
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<!-- </goals> -->
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<!-- <configuration> -->
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<!-- <classifier>sources</classifier> -->
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<!-- <includeArtifactIds>cdmlib-commons,cdmlib-model,cdmlib-persistence,cdmlib-remote,cdmlib-print,cdmlib-services,cdmlib-ext,cdmlib-io</includeArtifactIds> -->
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<!-- <outputDirectory>lib</outputDirectory> -->
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<!-- <overWriteReleases>true</overWriteReleases> -->
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<!-- <overWriteSnapshots>true</overWriteSnapshots> -->
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<!-- <excludeTransitive>true</excludeTransitive> -->
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<!-- <failOnMissingClassifierArtifact>false</failOnMissingClassifierArtifact> -->
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<!-- </configuration> -->
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<!-- </execution> -->
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</executions>
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</plugin>
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<plugin>
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<groupId>org.apache.maven.plugins</groupId>
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<artifactId>maven-antrun-plugin</artifactId>
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<version>1.7</version>
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<executions>
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<execution>
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<id>remove-existing-jars</id>
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<phase>clean</phase>
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<goals>
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<goal>run</goal>
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</goals>
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<configuration>
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<target>
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<echo>Remove all jars</echo>
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<delete>
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<fileset dir="./lib" includes="*" />
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</delete>
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</target>
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</configuration>
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</execution>
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<execution>
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<id>update-snapshot-jar-names</id>
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<phase>validate</phase>
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<goals>
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<goal>run</goal>
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</goals>
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<configuration>
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<target>
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<echo>Update jars to SNAPSHOT when build with
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timestamp</echo>
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<move todir="./lib">
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<fileset dir="./lib" />
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<mapper type="regexp" from="(^bioinfweb\-.*\-[0-9]-)[0-9.-]+(\.jar)" to="\1SNAPSHOT\2" />
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</move>
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<move todir="./lib">
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<fileset dir="./lib" />
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<mapper type="regexp" from="(^libralign\-.*\-[0-9]-)[0-9.-]+(\.jar)" to="\1SNAPSHOT\2" />
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</move>
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<move todir="./lib">
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<fileset dir="./lib" />
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<mapper type="regexp" from="(^tic\-.*\-[0-9]-)[0-9.-]+(\.jar)" to="\1SNAPSHOT\2" />
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</move>
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<move todir="./lib">
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<fileset dir="./lib" />
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<mapper type="regexp" from="(^jphyloio\-.*\-[0-9]-)[0-9.-]+(\.jar)" to="\1SNAPSHOT\2" />
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</move>
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<move todir="./lib">
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<fileset dir="./lib" />
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<mapper type="regexp" from="(^owlapi\-.*\-[0-9]-)[0-9.-]+(\.jar)" to="\1SNAPSHOT\2" />
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</move>
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<move todir="./lib">
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<fileset dir="./lib" />
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<mapper type="regexp" from="commons-collections4-4.1.jar" to="commons-collections4-4.1.jar" />
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</move>
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<move todir="./lib">
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<fileset dir="./lib" />
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<mapper type="regexp" from="(^core\-[0-9]\.[0-9]\.[0-9])(\.jar)" to="\1-SNAPSHOT\2" />
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</move>
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<move todir="./lib">
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<fileset dir="./lib" />
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<mapper type="regexp" from="(^sequencing\-[0-9]\.[0-9]\.[0-9])(\.jar)" to="\1-SNAPSHOT\2" />
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</move>
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</target>
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</configuration>
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</execution>
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</executions>
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</plugin>
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</plugins>
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</build>
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<dependencies>
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<!-- JPhyloIO -->
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<dependency>
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<groupId>info.bioinfweb.jphyloio</groupId>
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<artifactId>jphyloio-core</artifactId>
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<version>0-SNAPSHOT</version>
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</dependency>
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<dependency>
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<groupId>info.bioinfweb.thirdparty.owlapi</groupId>
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<artifactId>owlapi-xmlutils</artifactId>
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<version>4.1.4</version>
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</dependency>
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<dependency>
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<groupId>org.apache.commons</groupId>
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<artifactId>commons-collections4</artifactId>
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<version>4.1</version>
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</dependency>
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<!-- LibrAlign -->
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<dependency>
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<groupId>info.bioinfweb.libralign</groupId>
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<artifactId>libralign-core</artifactId>
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<version>0-SNAPSHOT</version>
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</dependency>
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<dependency>
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<groupId>info.bioinfweb.libralign</groupId>
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<artifactId>libralign-swt</artifactId>
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<version>0-SNAPSHOT</version>
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</dependency>
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<dependency>
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<groupId>info.bioinfweb.libralign</groupId>
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<artifactId>libralign-biojava1</artifactId>
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<version>0-SNAPSHOT</version>
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</dependency>
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<!-- bioinfweb.commons -->
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<dependency>
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<groupId>info.bioinfweb.commons.java</groupId>
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<artifactId>bioinfweb-commons-swt</artifactId>
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<version>2-SNAPSHOT</version>
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</dependency>
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<dependency>
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<groupId>info.bioinfweb.commons.java</groupId>
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<artifactId>bioinfweb-commons-core</artifactId>
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<version>2-SNAPSHOT</version>
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</dependency>
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<dependency>
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<groupId>info.bioinfweb.commons.java</groupId>
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<artifactId>bioinfweb-commons-bio</artifactId>
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<version>2-SNAPSHOT</version>
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</dependency>
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<dependency>
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<groupId>info.bioinfweb.commons.java</groupId>
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<artifactId>bioinfweb-commons-swing</artifactId>
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<version>2-SNAPSHOT</version>
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</dependency>
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<!-- TIC -->
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<dependency>
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<groupId>info.bioinfweb.tic</groupId>
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<artifactId>tic-core</artifactId>
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<version>2-SNAPSHOT</version>
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</dependency>
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<dependency>
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<groupId>info.bioinfweb.tic</groupId>
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<artifactId>tic-swt</artifactId>
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<version>2-SNAPSHOT</version>
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</dependency>
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<!-- BioJava -->
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<dependency>
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<groupId>org.biojava</groupId>
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<artifactId>core</artifactId>
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<version>1.9.2</version>
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</dependency>
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<dependency>
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<groupId>org.biojava</groupId>
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<artifactId>sequencing</artifactId>
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<version>1.9.2</version>
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</dependency>
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</dependencies>
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<repositories>
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<repository>
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<id>bioinfweb-maven-repo</id>
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<name>bioinfweb repository</name>
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<url>http://bioinfweb.info/MavenRepository/</url>
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</repository>
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<!-- <repository>
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<id>central-maven-repo</id>
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<name>Maven Central</name>
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<url>http://central.maven.org/maven2/</url>
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</repository> -->
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</repositories>
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</project>
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