EDIT

    <elements xsi:type="commands:Command" xmi:id="_tBCr8KmsEeeTAPHmaMLwQQ" elementId="eu.etaxonomy.taxeditor.store.command.imnportRisReference" commandName="%wizard.name.24"/>

    <elements xsi:type="commands:Handler" xmi:id="_96ANIKmsEeeTAPHmaMLwQQ" elementId="eu.etaxonomy.taxeditor.io.e4.ris.OpenRisImportWizard" contributionURI="bundleclass://eu.etaxonomy.taxeditor.store/eu.etaxonomy.taxeditor.io.e4.ris.OpenRisImportWizard" command="_tBCr8KmsEeeTAPHmaMLwQQ"/>

      <children xsi:type="menu:HandledMenuItem" xmi:id="_pQNeoKmsEeeTAPHmaMLwQQ" elementId="eu.etaxonomy.taxeditor.store.handledmenuitem.risReference" label="%wizard.name.24" command="_qAEkYKmjEeeTAPHmaMLwQQ"/>

/**

* Copyright (C) 2017 EDIT

* European Distributed Institute of Taxonomy

* http://www.e-taxonomy.eu

*

* The contents of this file are subject to the Mozilla Public License Version 1.1

* See LICENSE.TXT at the top of this package for the full license terms.

*/

package eu.etaxonomy.taxeditor.io.e4.ris;

import eu.etaxonomy.taxeditor.io.e4.AbstractImportWizardE4;

import eu.etaxonomy.taxeditor.io.e4.AbstractOpenImportWizard;

/**

 * @author pplitzner

 * @since Oct 5, 2017

 *

 */

public class OpenRisImportWizard extends AbstractOpenImportWizard {

    /**

     * {@inheritDoc}

     */

    @Override

    protected Class<? extends AbstractImportWizardE4> getImportWizardClass() {

        return RISImportWizardE4.class;

    }

}

/**

* Copyright (C) 2017 EDIT

* European Distributed Institute of Taxonomy

* http://www.e-taxonomy.eu

*

* The contents of this file are subject to the Mozilla Public License Version 1.1

* See LICENSE.TXT at the top of this package for the full license terms.

*/

package eu.etaxonomy.taxeditor.io.e4.ris;

import java.io.File;

import java.io.FileInputStream;

import java.io.FileNotFoundException;

import java.io.IOException;

import java.net.URI;

import java.util.ArrayList;

import java.util.List;

import javax.inject.Inject;

import org.apache.commons.io.IOUtils;

import org.apache.log4j.Logger;

import org.eclipse.core.runtime.jobs.Job;

import org.eclipse.e4.core.contexts.ContextInjectionFactory;

import org.eclipse.e4.core.contexts.IEclipseContext;

import org.eclipse.e4.ui.workbench.modeling.EPartService;

import eu.etaxonomy.cdm.database.DbSchemaValidation;

import eu.etaxonomy.cdm.io.common.IImportConfigurator.SOURCE_TYPE;

import eu.etaxonomy.cdm.io.reference.ris.in.RisReferenceImportConfigurator;

import eu.etaxonomy.taxeditor.io.e4.AbstractImportWizardE4;

import eu.etaxonomy.taxeditor.io.e4.GenericConfiguratorWizardPageE4;

import eu.etaxonomy.taxeditor.io.e4.ImportFromFileDataSourceWizardPageE4;

import eu.etaxonomy.taxeditor.io.wizard.ExcelDistributionUpdateWizard;

import eu.etaxonomy.taxeditor.store.CdmStore;

/**

 * @author k.luther

 * @date 12.05.2017

 *

 */

public class RISImportWizardE4 extends AbstractImportWizardE4<RisReferenceImportConfigurator>{

    private RisReferenceImportConfigurator configurator;

    private ImportFromFileDataSourceWizardPageE4 dataSourcePage;

    private static final Logger logger = Logger.getLogger(ExcelDistributionUpdateWizard.class);

    @Inject

    public RISImportWizardE4(IEclipseContext context, EPartService partService) {

        super(context, partService, null);

    }

    /** {@inheritDoc} */

    @Override

    public RisReferenceImportConfigurator getConfigurator() {

        return configurator;

    }

    /** {@inheritDoc} */

    @Override

    public boolean performFinish() {

        URI source = dataSourcePage.getUri();

        configurator.setDbSchemaValidation(DbSchemaValidation.CREATE);

        File file = new File(source);

       FileInputStream fis;

        try {

            fis = new FileInputStream(file);

            byte[] data;

            data = IOUtils.toByteArray(fis);

            configurator.setStream(data);

//TODO: workaround, needs to be changed to source as byte array

            Job job = CdmStore.getImportManager().createIOServiceJob(configurator, data, SOURCE_TYPE.INPUTSTREAM);

            CdmStore.getImportManager().run(job);

        } catch (FileNotFoundException e) {

            logger.error("Error while reading file" + source.toString());

        } catch (IOException e){

        }

        return true;

    }

    /** {@inheritDoc} */

    @Override

    public void init() {

        configurator = RisReferenceImportConfigurator.NewInstance();

    }

    /** {@inheritDoc} */

    @Override

    public void addPages() {

        addDataSourcePage();

    }

    @Override

    protected void addConfiguratorPage(){

        List<String> ignoreMethods = new ArrayList<>();

        ignoreMethods.add("setIgnoreNull");

        ignoreMethods.add("setInteractWithUser");

        ignoreMethods.add("setUseClassification");

        pageConfiguration = ContextInjectionFactory.make(GenericConfiguratorWizardPageE4.class, context);

        pageConfiguration.initImport(getConfigurator(), ignoreMethods, "Ris Import");

        addPage(pageConfiguration);

    }

    private void addDataSourcePage(){

        dataSourcePage = ContextInjectionFactory.make(ImportFromFileDataSourceWizardPageE4.class, context);

        dataSourcePage.setTitle("Choose Ris File");

        dataSourcePage.setDescription("Please choose an xls file in the Distribution Update format.");

        dataSourcePage.setExtensions(new String[]{"*.txt"});

        addPage(dataSourcePage);

    }

}