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/**
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* Copyright (C) 2017 EDIT
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* European Distributed Institute of Taxonomy
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* http://www.e-taxonomy.eu
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*
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* The contents of this file are subject to the Mozilla Public License Version 1.1
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* See LICENSE.TXT at the top of this package for the full license terms.
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*/
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package eu.etaxonomy.taxeditor.io.wizard;
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import java.io.File;
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import java.io.FileInputStream;
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import java.io.FileNotFoundException;
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import java.io.IOException;
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import java.net.URI;
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import java.util.ArrayList;
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import java.util.List;
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import org.apache.commons.io.IOUtils;
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import org.apache.log4j.Logger;
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import org.eclipse.core.runtime.jobs.Job;
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import org.eclipse.jface.viewers.IStructuredSelection;
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import org.eclipse.ui.IWorkbench;
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import eu.etaxonomy.cdm.database.DbSchemaValidation;
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import eu.etaxonomy.cdm.io.common.IImportConfigurator.SOURCE_TYPE;
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import eu.etaxonomy.cdm.io.reference.ris.in.RisReferenceImportConfigurator;
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import eu.etaxonomy.taxeditor.store.CdmStore;
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/**
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* @author k.luther
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* @date 12.05.2017
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*
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*/
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public class RISImportWizard extends AbstractImportWizard<RisReferenceImportConfigurator>{
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private RisReferenceImportConfigurator configurator;
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private ImportFromFileDataSourceWizardPage dataSourcePage;
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private static final Logger logger = Logger.getLogger(ExcelDistributionUpdateWizard.class);
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/* (non-Javadoc)
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* @see eu.etaxonomy.taxeditor.io.wizard.AbstractImportWizard#getConfigurator()
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*/
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/** {@inheritDoc} */
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@Override
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public RisReferenceImportConfigurator getConfigurator() {
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return configurator;
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}
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/* (non-Javadoc)
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* @see org.eclipse.jface.wizard.Wizard#performFinish()
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*/
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/** {@inheritDoc} */
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@Override
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public boolean performFinish() {
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URI source = dataSourcePage.getUri();
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// configurator.setSource(source);
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// try {
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// configurator = RisReferenceImportConfigurator.NewInstance(source, null);
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// } catch (MalformedURLException e1) {
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// // TODO Auto-generated catch block
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// e1.printStackTrace();
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// } catch (IOException e1) {
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// // TODO Auto-generated catch block
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// e1.printStackTrace();
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// }
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configurator.setDbSchemaValidation(DbSchemaValidation.CREATE);
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File file = new File(source);
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FileInputStream fis;
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try {
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fis = new FileInputStream(file);
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byte[] data;
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data = IOUtils.toByteArray(fis);
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configurator.setStream(data);
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//TODO: workaround, needs to be changed to source as byte array
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Job job = CdmStore.getImportManager().createIOServiceJob(configurator, data, SOURCE_TYPE.INPUTSTREAM);
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CdmStore.getImportManager().run(job);
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} catch (FileNotFoundException e) {
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logger.error("Error while reading file" + source.toString());
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} catch (IOException e){
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}
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//CdmStore.getImportManager().runMoniteredOperation(configurator, new File(source), SOURCE_TYPE.INPUTSTREAM);
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return true;
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}
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/* (non-Javadoc)
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* @see org.eclipse.ui.IWorkbenchWizard#init(org.eclipse.ui.IWorkbench, org.eclipse.jface.viewers.IStructuredSelection)
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*/
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/** {@inheritDoc} */
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@Override
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public void init(IWorkbench workbench, IStructuredSelection selection) {
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super.init(workbench, selection);
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configurator = RisReferenceImportConfigurator.NewInstance();
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}
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/* (non-Javadoc)
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* @see eu.etaxonomy.taxeditor.io.wizard.AbstractImportWizard#addPages()
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*/
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/** {@inheritDoc} */
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@Override
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public void addPages() {
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//addConfiguratorPage();
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addDataSourcePage();
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}
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@Override
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protected void addConfiguratorPage(){
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List<String> ignoreMethods = new ArrayList<>();
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ignoreMethods.add("setIgnoreNull");
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ignoreMethods.add("setInteractWithUser");
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ignoreMethods.add("setUseClassification");
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pageConfiguration = GenericConfiguratorWizardPage.Import(CONFIGURATION_PAGE, getConfigurator(), ignoreMethods, "Ris Import");
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addPage(pageConfiguration);
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}
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private void addDataSourcePage(){
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dataSourcePage = new ImportFromFileDataSourceWizardPage("Choose Ris File",
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"Please choose an xls file in the Distribution Update format.", new String[]{"*.txt"});
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addPage(dataSourcePage);
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}
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}
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