1
|
package eu.etaxonomy.taxeditor.editor.view.dataimport;
|
2
|
|
3
|
import org.apache.log4j.Logger;
|
4
|
import org.eclipse.jface.action.Action;
|
5
|
import org.eclipse.swt.widgets.Table;
|
6
|
import org.eclipse.swt.widgets.TableItem;
|
7
|
import org.eclipse.ui.IWorkbenchPart;
|
8
|
import org.eclipse.ui.IWorkbenchWindow;
|
9
|
import org.eclipse.ui.PlatformUI;
|
10
|
|
11
|
import eu.etaxonomy.cdm.api.conversation.ConversationHolder;
|
12
|
import eu.etaxonomy.cdm.api.service.IOccurrenceService;
|
13
|
import eu.etaxonomy.cdm.api.service.ITermService;
|
14
|
import eu.etaxonomy.cdm.ext.occurrence.gbif.GbifResponse;
|
15
|
import eu.etaxonomy.cdm.model.common.DefinedTermBase;
|
16
|
import eu.etaxonomy.cdm.model.common.ICdmBase;
|
17
|
import eu.etaxonomy.cdm.model.name.TaxonNameBase;
|
18
|
import eu.etaxonomy.cdm.model.occurrence.SpecimenOrObservationBase;
|
19
|
import eu.etaxonomy.taxeditor.store.CdmStore;
|
20
|
|
21
|
public class SaveImportedSpecimenAction extends Action {
|
22
|
|
23
|
private final Logger logger = Logger.getLogger(SaveImportedSpecimenAction.class);
|
24
|
|
25
|
/* (non-Javadoc)
|
26
|
* @see org.eclipse.jface.action.Action#run()
|
27
|
*/
|
28
|
@Override
|
29
|
public void run() {
|
30
|
final IWorkbenchWindow window = PlatformUI.getWorkbench().getActiveWorkbenchWindow();
|
31
|
IWorkbenchPart activePart = window.getActivePage().getActivePart();
|
32
|
if(activePart instanceof DataImportView<?>){
|
33
|
DataImportView<?> dataImportView = (DataImportView<?>)activePart;
|
34
|
Table table = dataImportView.getTable();
|
35
|
for(TableItem item:table.getItems()){
|
36
|
if(item.getChecked()){
|
37
|
//Save Specimen
|
38
|
Object data = item.getData();
|
39
|
if(data instanceof GbifResponse){
|
40
|
data = ((GbifResponse) item.getData()).getDerivedUnitFacade().innerFieldUnit();
|
41
|
}
|
42
|
if(data instanceof SpecimenOrObservationBase){
|
43
|
ConversationHolder conversation = dataImportView.getConversationHolder();
|
44
|
SpecimenOrObservationBase<?> specimen = (SpecimenOrObservationBase<?>) data;
|
45
|
conversation.bind();
|
46
|
IOccurrenceService occurrenceService = CdmStore.getService(IOccurrenceService.class);
|
47
|
for(ICdmBase cdmEntity:occurrenceService.getNonCascadedAssociatedElements(specimen)){
|
48
|
if(cdmEntity instanceof DefinedTermBase){
|
49
|
persistTerm((DefinedTermBase<?>) cdmEntity, CdmStore.getService(ITermService.class), conversation);
|
50
|
}
|
51
|
else if(cdmEntity instanceof TaxonNameBase){
|
52
|
//user interaction
|
53
|
}
|
54
|
}
|
55
|
occurrenceService.saveOrUpdate(specimen);
|
56
|
dataImportView.getConversationHolder().commit(true);
|
57
|
}
|
58
|
}
|
59
|
}
|
60
|
}
|
61
|
}
|
62
|
|
63
|
private void persistTerm(DefinedTermBase<?> term, ITermService termService, ConversationHolder conversation){
|
64
|
if(term!=null){
|
65
|
//if the term does not exist in the DB save it
|
66
|
if(termService.find(term.getUuid())==null){
|
67
|
termService.saveOrUpdate(term);
|
68
|
}
|
69
|
}
|
70
|
}
|
71
|
|
72
|
|
73
|
/* (non-Javadoc)
|
74
|
* @see org.eclipse.jface.action.Action#getText()
|
75
|
*/
|
76
|
@Override
|
77
|
public String getText() {
|
78
|
return "Import";
|
79
|
}
|
80
|
|
81
|
}
|