ref #6283 Fixed potential NPE for EntitySelectionElement
fix #5496 Refactor preference pages to use TermType
ref #6333 Remove framework for exchanging an element in the details view
ref #6333 Add generic support for entity collection sections to allow
adding existing entities
ref #6307 remove cdmserver/ from contextpath
ref #5922 Change order in supplemental data view (cont.)
fix #6334: unsaved description needs to be removed from the taxon
add missing changes
fix #5365: add delete configuration to media view
remove unused bin.include
Saving files before refreshing line endings
Merge branch 'develop' into LibrAlign
Alternative versions for build.properties added. Current state set to "dependencies from JARs". (Can be merged to trunk in this state.)
ref #5495 always empty details view when there is no active editor
providing a selection
pom.xml and MANIFEST.MF updated in molecular.lib.
Adjustments to project structure changes in JPhyloIO.
ref #6158 Add missing git clone command to doc
fix #6158 updated taxeditor installation documentation
fix #5922 Move extensions section down
fix #5671: add filter element for selection dialog
ref #6320 show pherogram title cache in single read label
Fix icon for media derivative
fix #6307 Show contextPath in error log
Removed unused import
fix #4246: move insert node and create new key node to one menu item with submenu
fix #5488 show only zoological nomenclatural status types not for
fix #5495 DetailsView is emptied when upon context stop i.e. when the
connection is shut down
fix #5714 Add possibility for adding a comparator to EnumComboElement
fix #5474 moved Feature and NamedArea to top level
fix #5698 Duplicate ampersand to avoid conversion to mnemonic
fix #5922 Move credits and rights section to the bottom
fix #4821: create OrderedTermvoc for OrderedTerms
Fix possible NPE
ref #6190 removing svn property place holder in first line of code - java files
minor to fix failing jenkins
more changes for configurable name details view
adaptions for polytomous key editing to avoid null values in children list
ref #6105: add name details view configuration to the cdm preferences view
deduplicate the nomenclatural code preference page in preferences menu
ref #4766: remove apply and restore defaults buttons
ref #4766: sortindex updater integration in admin menu
Merge branch 'hotfix/4.4.1' into develop
Updated version in pom / project files to taxeditor version : 4.4.1 and cdmlib version : 4.4.1
Merge branch 'release/4.4.0' into develop
Merge branch 'release/4.4.0'
Updated version in pom / project files to taxeditor version : 4.5.0-SNAPSHOT and cdmlib version : 4.5.0-SNAPSHOT
Updated version in pom / project files to taxeditor version : 4.4.0 and cdmlib version : 4.4.0
fix #6218: avoid NPE when remove text from label field
fix #5971 fix NPE for not existing preference
ref #6199 Move "open in editor" option to the bottom
add missing files
avoid NPE when reusing taxonname for taxon creation
ref #6219: add warning that synonym is deleted immediately
l10n for PresenceAbsenceTermDetailElement
ref #6216 Added button to select color instead of clicking on color
Align label to the middle
fix #4945: add propertytester for polytomouskeynode to enable menu items only if node is selected
fix #5971: move admin menu in front of Help
Adapt labels for taxon node agent relation editing
ref #6216 Pre-select color in ColorDialog
fix #6216 Implement color dialog to change color of presence absence
all polytomouskey related handler are now extended from RemotingCdmHandler
fix #5841: set selection to newly created keynode
fix #6215: check for datasource when opening preferencepage
fix #5971: admin menu is visible only if connected and user has role manager
fix #6209: adapt the message if a datasource is not available
Additional strings externalized in molecular plugin.
Wizard for exporting single read alignments now warns and prompts if files are overwritten.
Bug fix: Changes in the format selection in the wizard now trigger validation again.
ExportSingleReadAlignmentWizardModel uses format list instead of map again.
ref #5971: new main menu admin with cdm preference nomenclatural code and insert polytomous key node
Support for parameters to export only single reads or only consensus implemented.
Missing files from last commit added.
Export single read alignment wizard separated into two pages.
Option to elongate sequences added.
Application information parameters of JPhyloIO set.
Exported single read sequences are now filled up with gaps. (Will be dependent on a parameter in the future.)
Texts in ExportSequenceToFileHandler extzernalized and translated.
Strings in ExportSingleReadAlignmentWizardPage externalized and translated.
Fixes in ExportSingleReadAlignmentWizardPage layout.
Default values added to ExportSingleReadAlignmentWizardModel.
Updating values after model binding in ExportSingleReadAlignmentWizardPage implemented.
ref #6198 removed synonym type combobox
ref #6198 Correctly initialise ui field for pro parte and partial
ref #6205 Move excluded notes to the bottom of the wizard
Export single read alignment wizard validation refactored and extended.
Some German translations in molecular plug-in added.
Intermediate commit in implementing wizard validation (before moving to MultiValidator).
Plug-in dependencies added to molecular.
fix #6199 Excluded note for excluded taxon nodes in TaxEditor
ExportSingleReadAlignmentWizard now exposes whole format info object.
FileDialog added to ExportSingleReadAlignmentWizardPage.
Clean up Derivate perspective
Fix potential NPE
fix #6198 Remove synonymrelationships in TaxEditor
fix #6197 Move excluded and unplaced from Taxon to TaxonNode in
Fix possible widget is disposed exception
Missing dependency Apache commons.lang added to molecular.lib.
Single read alignment export feature now makes use of wizard. (Selecting which sequences to export is not yet supported.)
New JPhyloIO package now exported by molecular.lib.
SingleReadAlignmentPredicates renamed to SingleReadAlignmentRDFXMLConstants.
Pherogram alignment shifts are now written to single read export unsing a custom ObjectTranslator implementation.
Move MoveTaxonOperationTest to navigation package and try to enable
ref #5875 fix testdata in TaxEditor