Project

General

Profile

Statistics
| Branch: | Tag: | Revision:

# Date Author Comment
01840d49 01/17/2017 11:29 PM Andreas Müller

ref #5922 Change order in supplemental data view (cont.)

9d28ffb6 01/17/2017 11:57 AM Katja Luther

minor

1f9fcd90 01/17/2017 11:56 AM Katja Luther

fix #6334: unsaved description needs to be removed from the taxon

40de894f 01/17/2017 11:52 AM Katja Luther

add missing changes

5291be06 01/17/2017 11:46 AM Katja Luther

minor

d747b2b9 01/17/2017 11:00 AM Katja Luther

fix #5365: add delete configuration to media view

fff59041 01/13/2017 04:35 PM Patrick Plitzner

remove unused bin.include

645c77a1 01/13/2017 04:02 PM Patrick Plitzner

Saving files before refreshing line endings

1c69b0d0 01/13/2017 03:33 PM Patrick Plitzner

Merge branch 'develop' into LibrAlign

64f25b56 01/13/2017 03:11 PM Ben Stöver

Alternative versions for build.properties added. Current state set to "dependencies from JARs". (Can be merged to trunk in this state.)

6de63659 01/13/2017 01:51 PM Patrick Plitzner

ref #5495 always empty details view when there is no active editor
providing a selection

e54b6c76 01/13/2017 01:33 PM Ben Stöver

pom.xml and MANIFEST.MF updated in molecular.lib.

ef1673ea 01/13/2017 12:08 PM Ben Stöver

Adjustments to project structure changes in JPhyloIO.

a2cfd9b1 01/13/2017 09:25 AM Patrick Plitzner

ref #6158 Add missing git clone command to doc

8e2a3b63 01/13/2017 09:21 AM Patrick Plitzner

fix #6158 updated taxeditor installation documentation

55409937 01/12/2017 11:57 PM Andreas Müller

fix #5922 Move extensions section down

79be504a 01/12/2017 11:56 PM Andreas Müller

cleanup

c1c83a38 01/12/2017 04:50 PM Katja Luther

fix #5671: add filter element for selection dialog

a5a9fcde 01/10/2017 04:45 PM Patrick Plitzner

ref #6320 show pherogram title cache in single read label

799a6449 01/10/2017 04:25 PM Patrick Plitzner

Fix icon for media derivative

5b6653af 01/10/2017 03:06 PM Patrick Plitzner

fix #6307 Show contextPath in error log

4abd9b52 01/10/2017 03:06 PM Patrick Plitzner

Removed unused import

40bd7837 01/10/2017 01:57 PM Katja Luther

fix #4246: move insert node and create new key node to one menu item with submenu

1738ed58 01/06/2017 04:40 PM Patrick Plitzner

fix #5488 show only zoological nomenclatural status types not for
botanical names

  • also dis some refactoring
2443669b 01/06/2017 03:49 PM Patrick Plitzner

fix #5495 DetailsView is emptied when upon context stop i.e. when the
connection is shut down

0c7c9656 01/06/2017 02:36 PM Patrick Plitzner

fix #5714 Add possibility for adding a comparator to EnumComboElement

  • for Sources always have PrimaryTaxonomicSource or PrimaryMediaSource on top depending on IdentifiableSource
60e722d0 01/06/2017 11:08 AM Patrick Plitzner

fix #5474 moved Feature and NamedArea to top level

  • remaining terms are under "Other..."
4f22ac1d 01/06/2017 08:56 AM Patrick Plitzner

fix #5698 Duplicate ampersand to avoid conversion to mnemonic

ac2d218a 01/06/2017 08:39 AM Patrick Plitzner

fix #5922 Move credits and rights section to the bottom

9e550198 01/04/2017 03:08 PM Katja Luther

fix #4821: create OrderedTermvoc for OrderedTerms

cba60f25 12/22/2016 11:09 AM Patrick Plitzner

Fix possible NPE

ebc31cb0 12/20/2016 02:28 PM Andreas Kohlbecker

ref #6190 removing svn property place holder in first line of code - java files

e3240965 12/20/2016 02:22 PM Andreas Kohlbecker

ref #6190 removing svn property place holder in first line of code - java files

23925b61 12/20/2016 01:03 PM Katja Luther

missing changes

ab553c7a 12/20/2016 12:54 PM Katja Luther

minor

6c704323 12/20/2016 12:50 PM Katja Luther

minor to fix failing jenkins

fa39cfe4 12/19/2016 04:16 PM Katja Luther

more changes for configurable name details view

d37de08a 12/19/2016 04:14 PM Katja Luther

adaptions for polytomous key editing to avoid null values in children list

05030527 12/19/2016 04:04 PM Katja Luther

ref #6105: add name details view configuration to the cdm preferences view

5c9c924c 12/19/2016 03:58 PM Katja Luther

deduplicate the nomenclatural code preference page in preferences menu

2c4452d9 12/08/2016 11:57 AM Katja Luther

ref #4766: remove apply and restore defaults buttons

1183a87f 12/08/2016 11:31 AM Katja Luther

ref #4766: sortindex updater integration in admin menu

cf36df3f 12/07/2016 01:26 PM jenkins

Merge branch 'hotfix/4.4.1' into develop

13834394 12/06/2016 03:40 PM jenkins

Updated version in pom / project files to taxeditor version : 4.4.1 and cdmlib version : 4.4.1

47596c87 12/05/2016 04:19 PM jenkins

Merge branch 'release/4.4.0' into develop

d2f3794a 12/05/2016 04:19 PM jenkins

Merge branch 'release/4.4.0'

a25a0a15 12/05/2016 03:50 PM jenkins

Updated version in pom / project files to taxeditor version : 4.5.0-SNAPSHOT and cdmlib version : 4.5.0-SNAPSHOT

2b99aa56 12/05/2016 03:50 PM jenkins

Updated version in pom / project files to taxeditor version : 4.4.0 and cdmlib version : 4.4.0

d57cedd1 12/05/2016 10:42 AM Katja Luther

fix #6218: avoid NPE when remove text from label field

5de23116 12/01/2016 04:02 PM Andreas Müller

fix #5971 fix NPE for not existing preference

5e027f1f 12/01/2016 03:46 PM Andreas Müller

cleanup

26cb69af 12/01/2016 03:38 PM Patrick Plitzner

ref #6199 Move "open in editor" option to the bottom

d6c025ed 12/01/2016 11:55 AM Katja Luther

add missing files

d70c528d 12/01/2016 09:14 AM Katja Luther

avoid NPE when reusing taxonname for taxon creation

a6de10b5 11/25/2016 12:59 PM Katja Luther

ref #6219: add warning that synonym is deleted immediately

ab94d85b 11/24/2016 02:50 PM Patrick Plitzner

l10n for PresenceAbsenceTermDetailElement

cb1498ea 11/24/2016 02:27 PM Patrick Plitzner

ref #6216 Added button to select color instead of clicking on color
field

  • resized color field
3dbe4420 11/24/2016 02:27 PM Patrick Plitzner

Align label to the middle

f81dda1f 11/24/2016 01:41 PM Katja Luther

fix #4945: add propertytester for polytomouskeynode to enable menu items only if node is selected

bb920fa1 11/24/2016 01:39 PM Katja Luther

fix #5971: move admin menu in front of Help

0908acf3 11/24/2016 12:18 PM Andreas Müller

Adapt labels for taxon node agent relation editing

15f5a1bd 11/24/2016 10:25 AM Patrick Plitzner

ref #6216 Pre-select color in ColorDialog

cf4bd11f 11/24/2016 10:22 AM Patrick Plitzner

fix #6216 Implement color dialog to change color of presence absence
terms

033aad78 11/24/2016 09:52 AM Katja Luther

all polytomouskey related handler are now extended from RemotingCdmHandler

efd30f4b 11/23/2016 03:04 PM Katja Luther

fix #5841: set selection to newly created keynode

84ab8cb0 11/23/2016 02:54 PM Katja Luther

fix #6215: check for datasource when opening preferencepage

0bd095d9 11/23/2016 10:22 AM Katja Luther

fix #5971: admin menu is visible only if connected and user has role manager

af45abb8 11/21/2016 03:56 PM Katja Luther

fix #6209: adapt the message if a datasource is not available

80e535dd 11/19/2016 01:29 PM Ben Stöver

Additional strings externalized in molecular plugin.
Wizard for exporting single read alignments now warns and prompts if files are overwritten.
Bug fix: Changes in the format selection in the wizard now trigger validation again.
ExportSingleReadAlignmentWizardModel uses format list instead of map again.

e9773ade 11/18/2016 06:25 PM Katja Luther

ref #5971: new main menu admin with cdm preference nomenclatural code and insert polytomous key node

ecd0d355 11/18/2016 05:01 PM Ben Stöver

Messages edited.
Support for parameters to export only single reads or only consensus implemented.
JavaDoc extended.

a862b815 11/18/2016 03:45 PM Ben Stöver

Missing files from last commit added.

00d1a6ce 11/18/2016 03:43 PM Ben Stöver

Export single read alignment wizard separated into two pages.
Option to elongate sequences added.
Application information parameters of JPhyloIO set.

7417db95 11/17/2016 07:17 PM Ben Stöver

Exported single read sequences are now filled up with gaps. (Will be dependent on a parameter in the future.)
Texts in ExportSequenceToFileHandler extzernalized and translated.

d0c85dbc 11/17/2016 05:22 PM Ben Stöver

Strings in ExportSingleReadAlignmentWizardPage externalized and translated.

02e8904c 11/17/2016 01:40 PM Ben Stöver

Fixes in ExportSingleReadAlignmentWizardPage layout.
Default values added to ExportSingleReadAlignmentWizardModel.
Updating values after model binding in ExportSingleReadAlignmentWizardPage implemented.

6ecec98b 11/17/2016 10:09 AM Patrick Plitzner

ref #6198 removed synonym type combobox

c9d05940 11/17/2016 10:06 AM Patrick Plitzner

ref #6198 Correctly initialise ui field for pro parte and partial

4f57e9bf 11/17/2016 10:05 AM Patrick Plitzner

ref #6205 Move excluded notes to the bottom of the wizard

7ffbdbb1 11/16/2016 11:18 PM Ben Stöver

Export single read alignment wizard validation refactored and extended.
Some German translations in molecular plug-in added.

661914be 11/16/2016 09:25 PM Ben Stöver

Intermediate commit in implementing wizard validation (before moving to MultiValidator).
Plug-in dependencies added to molecular.

ac1659d4 11/15/2016 05:27 PM Patrick Plitzner

fix #6199 Excluded note for excluded taxon nodes in TaxEditor

924ba372 11/15/2016 05:09 PM Ben Stöver

ExportSingleReadAlignmentWizard now exposes whole format info object.
FileDialog added to ExportSingleReadAlignmentWizardPage.

94e60697 11/15/2016 03:11 PM Patrick Plitzner

Clean up Derivate perspective

  • Remove Derivate view as it is not a view but an editor (they have their own designated area)
48005c5f 11/15/2016 03:10 PM Patrick Plitzner

Fix potential NPE

69410b96 11/15/2016 10:50 AM Patrick Plitzner

fix #6198 Remove synonymrelationships in TaxEditor

3e194787 11/15/2016 10:12 AM Patrick Plitzner

fix #6197 Move excluded and unplaced from Taxon to TaxonNode in
TaxEditor

fdefb4bc 11/15/2016 09:47 AM Patrick Plitzner

Fix possible widget is disposed exception

e701bdea 11/15/2016 09:35 AM Patrick Plitzner

Fix potential NPE

bcb823d5 11/14/2016 07:34 PM Ben Stöver

Missing dependency Apache commons.lang added to molecular.lib.
Single read alignment export feature now makes use of wizard. (Selecting which sequences to export is not yet supported.)

9a9359ce 11/14/2016 05:34 PM Ben Stöver

New JPhyloIO package now exported by molecular.lib.
SingleReadAlignmentPredicates renamed to SingleReadAlignmentRDFXMLConstants.
Pherogram alignment shifts are now written to single read export unsing a custom ObjectTranslator implementation.

fc53d911 11/14/2016 04:12 PM Andreas Müller

cleanup

0d726c87 11/14/2016 04:12 PM Andreas Müller

Move MoveTaxonOperationTest to navigation package and try to enable

e042ef3a 11/14/2016 02:38 PM Andreas Müller

ref #5875 fix testdata in TaxEditor

b3570263 11/14/2016 02:27 PM Andreas Müller

ref #5875 fix testdata in TaxEditor

d837c623 11/14/2016 02:26 PM Andreas Müller

add gitignore

d0899d41 11/14/2016 02:13 PM Andreas Müller

ref #3925 fix testdata in TaxEditor

18336f56 11/14/2016 02:01 PM Andreas Müller

ref #3925 fix testdata in TaxEditor

9300078c 11/14/2016 01:39 PM Andreas Müller

ref #3925 fix testdata in TaxEditor

7f30d120 11/14/2016 01:38 PM Andreas Müller

Clean up