Project

General

Profile

Statistics
| Branch: | Tag: | Revision:

# Date Author Comment
5f152d2b 05/28/2014 10:57 AM Patrick Plitzner
  • added new DataImportEditor for GbifResponses
    • allows querying for original record via context menu
548ba7b9 05/26/2014 05:08 PM Patrick Plitzner
  • adapted info text for import wizard
    • added toggle button for date field
ab287c7e 05/22/2014 04:14 PM Patrick Plitzner
  • added date support for query parameter in specimen search
    • linked some more query parameters
6a14c1c4 05/22/2014 08:59 AM Patrick Plitzner
  • extended specimen search with provider selection (GBIF, BioCase)
43df4121 05/15/2014 05:59 PM Andreas Müller

fix NPE for unselected feature tree

3d970055 05/13/2014 05:02 PM Patrick Plitzner
  • minor refactoring
15d44593 05/13/2014 03:55 PM Patrick Plitzner
  • disabling event handling for DetailsView of TissueSample
17cb7418 05/13/2014 12:29 PM Cherian Mathew

setting name in case of editing datasource

a0d3e1a7 05/08/2014 10:35 AM Patrick Plitzner
  • fixed toggling of title cache lock
b1b01a27 05/08/2014 10:30 AM Cherian Mathew

remmoved setting of database name to empty when cloning

285ba853 05/07/2014 05:07 PM Andreas Müller

make lineSeparator 1.6 compatibel again

2cc1a60e 05/07/2014 10:59 AM Cherian Mathew

added new constructor with mode argument for wizard pages and deprecated the old constructor.
CdmDataSourceWizard and CdmDataSourceTypeSelectionWizardPage now call the new constructor.

3001881c 05/06/2014 04:53 PM Cherian Mathew

refactoring cdm data source to cdm source
plugin.xml : added clone menu item / command

5ed160dc 05/06/2014 04:37 PM Cherian Mathew

refactored wizard dialog and pages to allow for easy in place editing and cloning of datasources.
CdmDataSourceRepository : added methods for (I)PersistentRemoteSource

2e25ff01 05/06/2014 04:32 PM Cherian Mathew

refactoring to change the specific (I)CdmDataSource to the more generic (I)CdmSource to prepare fro remoting
CloneDataSourceHandler : new handler to clone a datasource

3f8e87ed 05/05/2014 03:01 PM Katja Luther

adding a taxon bulk editor and changes because the delete methods does not throw exceptions anymore

dfd06c80 04/29/2014 03:55 PM Patrick Plitzner
  • simplified showParts() method in DetailsViewer for showing empty page
4d1c9e9b 04/15/2014 10:20 AM Patrick Plitzner
  • renamed TextWithLabelElement to avoid import/name conflicts (ma be renamed if we fully refactor using MVC pattern)
50a05434 04/15/2014 10:14 AM Patrick Plitzner
  • added interfaces and classes for MVC pattern
    • implemented/adapted MVC pattern for TextWithLabelElement and EnumTermCombo element
1252b6ea 04/10/2014 08:38 AM Patrick Plitzner
  • commented "Original Label Data" text field because it is not yet used in trunk
98663175 04/09/2014 04:23 PM Cherian Mathew

CdmStore : no longer need to set configuration in hibernate classes here
CdmStoreConnector : new method to retrieve configuration based on cdm source type

49397612 04/08/2014 08:53 AM Patrick Plitzner
  • set default derivate typ filter to "unknown"
9d127efb 04/08/2014 08:52 AM Patrick Plitzner
  • javadoc
8f0f3832 04/07/2014 11:42 AM Patrick Plitzner
  • partially added handling of input fields
d3855867 04/04/2014 11:42 AM Cherian Mathew

removed repeated call to get all cdm sources

9bd84319 04/04/2014 11:41 AM Cherian Mathew

updating to align with refactored cdm source classes / interfaces

3345efc0 04/02/2014 04:08 PM Patrick Plitzner
  • refactored context menu for DerivateView to be programmatic instead of declarative (using plugin.xml)
    • fixed icon bug for DerivateSearchView
35a12f14 04/02/2014 11:37 AM Patrick Plitzner
  • added update() method to DerivateView
    • display different icon for SingleReads linked to multiple Sequences
e425aaf7 04/01/2014 05:14 PM Patrick Plitzner
  • added Copy/Paste for SingleRead->Sequence to DerivateView
    • copying actually just creates a link
71d89d46 04/01/2014 10:03 AM Patrick Plitzner
  • fixed user message
8942ee00 04/01/2014 09:44 AM Patrick Plitzner
  • added gel photo detail element to Amplification wizard
6b06a799 04/01/2014 08:51 AM Patrick Plitzner
  • removed Amplification as a TreeNode from the DerivateView
    • added Amplification to DetailsView of SingleRead as an EntitySelectionElement
a9d0fdf8 04/01/2014 08:49 AM Patrick Plitzner
  • fixed javadoc
e6a339fa 03/31/2014 02:19 PM Patrick Plitzner
  • organize imports for new molecular services
27cc4c06 03/26/2014 01:35 PM Patrick Plitzner
  • reset input fields of DerivateSearchView when context stops
55c3c2c0 03/26/2014 08:39 AM Patrick Plitzner
  • added drag'n'drop support for Sequences
    • added context listener to DerivateSearchView
    • refactored MVC pattern of DerivateSearchView
0f8371fb 03/24/2014 02:24 PM Patrick Plitzner
  • added timeout to internet availability check
6d417ae0 03/24/2014 02:23 PM Patrick Plitzner
  • fixed ClassCastException for FeatureNodeContainers
6f3fe1f5 03/19/2014 03:53 PM Patrick Plitzner
  • fixed class cast exception resulting from TreeNodes of DerivateView
6410237a 03/17/2014 11:03 PM Andreas Kohlbecker

taxeditor part of fix for #4121 (Changing password does not work)

aa2f3cbf 03/17/2014 10:02 AM Patrick Plitzner
  • added isEnabled() method to IEnableableFormElement
23e15ade 03/17/2014 09:43 AM Patrick Plitzner
  • removed StoreUtil.getCdmEntity() invocation (#4091)
1cb96484 03/17/2014 08:51 AM Patrick Plitzner
  • implemented EntitySelectionElement for Primer
    • adapted details views with primer selection element
87bae5e8 03/14/2014 02:52 PM Andreas Kohlbecker

implementing #4120: User always needs to have the right to change password and hiding all user related menu contributions if no user is logged in

ddf2f529 03/13/2014 09:23 PM Cherian Mathew

setting application configuration and boolean remoting flag (bean) in hibernate proxy classes to differentiate local and remoting

14fde9f4 03/13/2014 04:51 PM Andreas Kohlbecker

after review final modification for #4115 ('editor' users cannot create new references via the reference select list)

118295d6 03/13/2014 04:09 PM Andreas Kohlbecker

implementing #4123 (add idInVocabulary to term labels in editor)

fcbc1c42 03/13/2014 01:39 PM Andreas Kohlbecker

catching PermissionDeniedExceptions when only doing a check, so these exceptions no longer pollute the log

fdedfe16 03/11/2014 06:47 PM Andreas Kohlbecker

fixing #4115 ('editor' users cannot create new references via the reference select list)

ae124a8e 03/11/2014 06:10 PM Andreas Kohlbecker

fixing #4116 (ClassCastException when selecting Euro+Med top level area in DistributionElement details view)

d21fe505 03/11/2014 05:38 PM Andreas Kohlbecker

fixing problem of publish checkbox disabled state being overwritten

1b52b9e4 03/11/2014 08:38 AM Patrick Plitzner
  • refactored selection of DerivateView to be TreeNode
    • adapted selection handling
    • restructured derivate hierarchy
    • Amplifications are now a direct child of Sequences
    • the can only be created when having a SingleRead
    • this representation does not affect the cdm structure
a3d76424 03/10/2014 12:43 PM Andreas Kohlbecker

fixing: #4110 (imlement nicer warning dialogue in Taxon Editor for permission denied exception)

97683dd7 03/06/2014 06:09 PM Andreas Kohlbecker

more details in exception message of StoreUtil.getCdmEntity()

839cb4cd 03/05/2014 06:18 PM Andreas Kohlbecker

avoiding NPE and other exceptions

b92f1605 03/05/2014 06:18 PM Andreas Kohlbecker

no longer using a conversation for the login dialog and thus fixing problems after putting wrong credentials

1c29bd52 03/05/2014 06:15 PM Andreas Kohlbecker

fixing setEnabled method

7d892339 03/05/2014 03:28 PM Patrick Plitzner
  • fixed event handling by creating and linking the missing elements
8475fe50 03/05/2014 01:24 PM Patrick Plitzner
  • added missing DNA Quality section
664a3be9 03/05/2014 01:18 PM Patrick Plitzner
  • adpated DNA DetailsViews according to current development
1cf32439 03/05/2014 01:16 PM Patrick Plitzner
  • renamed getBaseUnit() to baseUnit()
99fa2e6e 03/05/2014 01:16 PM Patrick Plitzner
  • added transparency to icons
09a1be0a 03/05/2014 08:43 AM Patrick Plitzner
  • added util method to get for getting a CDM entity (used in authenication/permission framework)
    • made use of this method where the type of the parameter was too general (like object)
    • made getBaseUnit() of DerivedUnitFacade public
265af043 03/04/2014 05:18 PM Patrick Plitzner
  • added icons for Amplification, Sequence and SingleRead
39b24584 03/04/2014 09:25 AM Patrick Plitzner
  • added code to show icon for Amplification, Sequence and SingleRead (image files still missing)
    • removed text fields for media file in dna DetailsViews
    • added contig file in Sequence DetailsView
3d3c7b7c 03/03/2014 09:48 AM Patrick Plitzner
  • added cascading save to pherogram (Media) of SingleRead
    • added media section to DetailsViews for Amplification (gel photo) and SingelRead (pherogram)
06ba42c7 02/28/2014 12:17 PM Andreas Kohlbecker

fixing missing text of Group members (User) in details section

db88d819 02/26/2014 05:25 PM Andreas Kohlbecker

protecting editing capabilities of names references and authors - #4055 (action enablement adapts to the users granted authorities)

90d2c4f6 02/26/2014 03:36 PM Andreas Kohlbecker

fix: adding missing case statements

0c61ddac 02/26/2014 12:02 PM Andreas Kohlbecker

disabling edit button if user is allowed to UPDATE & making text elements selectable

abe42729 02/26/2014 12:02 PM Andreas Kohlbecker

implementing the CommandHandlerButton and using it as button to open the OpenFeatureTreeEditorWizard - #4055 (action enablement adapts to the users granted authorities)

b052c40f 02/21/2014 07:16 PM Andreas Kohlbecker

adding warning dialog on unavailabel DefinedTermEditor

c09bbef0 02/21/2014 07:15 PM Andreas Kohlbecker

fixing broken parameter for eu.etaxonomy.taxeditor.store.openDefinedTermEditor command

b7b99774 02/19/2014 03:56 PM Patrick Plitzner
  • implemented "Save Specimen" command
    • added @Override annotations
45716169 02/19/2014 03:52 PM Andreas Kohlbecker

RolesSourceProvider to enable activities by cdm roles and protecting bulkeditors and term editors - #4055 (action enablement adapts to the users granted authorities)

3692b5bf 02/19/2014 03:52 PM Andreas Kohlbecker

base implementation and configuration for securing the editor - #4055 (action enablement adapts to the users granted authorities)

42580bdf 02/18/2014 08:42 AM Patrick Plitzner
  • updated SpecimenImportWizard
    • refactored BioCase querying to be a separate job
6b5ad34c 02/17/2014 03:48 PM Patrick Plitzner
  • added preference which shows determination section only for FieldUnits in the DetailsView
    • added missing parameters for SingleRead DetailsView
b7acd48e 02/13/2014 01:16 PM Patrick Plitzner
  • added missing parameters for SingleRead DetailsView
82dfc775 02/13/2014 01:15 PM Patrick Plitzner
  • added option to set text limit for TextWithLabelElement
a500a93f 02/13/2014 01:08 PM Cherian Mathew

reverting cdm application / controller refactoring and simply extending the CdmApplicationRemoteConfiguration class
by throwing UnsupportedOperationException for methods that are not supported by remoting

050bbe43 02/12/2014 05:59 PM Cherian Mathew

correcting import

b63c5f73 02/12/2014 03:19 PM Cherian Mathew

refactoring ICdmApplicationDefaultConfiguration

7fad0a08 02/12/2014 02:02 PM Cherian Mathew

refactoring CdmApplicationConfiguration/Controller to allow for remoting
CdmStoreConnector : added application configuration call for remoting (currently commented)

208c4586 02/12/2014 01:13 PM Patrick Plitzner
  • added "Search"-Button to DerivateSearchView
af9950d6 02/12/2014 12:40 PM Patrick Plitzner
  • enabled DerivateType filter in DerivateSearchView
e2b6e8ec 02/12/2014 10:10 AM Cherian Mathew

merge from trunk

2d8f997f 02/12/2014 09:36 AM Patrick Plitzner
  • added combo controller to combo field in DerivateSearchView
bba7bee5 02/11/2014 05:20 PM Andreas Kohlbecker

solving #4056 (taxeditor responds with nicer dialogue in case a user executes a prohibited operation)

0abb401a 02/11/2014 04:30 PM Cherian Mathew

merge from trunk

8f94e399 02/11/2014 04:30 PM Cherian Mathew

added possibility to switch to remoting

b510c3f7 02/11/2014 01:15 PM Patrick Plitzner
  • additional fix for #3589 and #3588
479dfcda 02/11/2014 09:44 AM Patrick Plitzner
  • separated GUI from control elements for term combo widget (part of #3627)
c8dc4736 02/10/2014 07:22 PM Andreas Kohlbecker

part 2 of preliminary solution to #4053 (Transient field User.authorities not refreshed on reloading entity)

4e59c9c1 02/10/2014 02:59 PM Andreas Kohlbecker

solving #4013 (GrantedAuthority: Humane label of TaxonNode authorities)

629b5079 02/07/2014 12:55 PM Andreas Müller

move elevation back to first page #4037

f4ba1ef6 02/06/2014 03:18 PM Andreas Kohlbecker

part 2 of fixing #2414 (Group updating doesn't work) by committing and restarting the transaction in the conversation

c370c5cd 02/06/2014 03:16 PM Andreas Kohlbecker

more log.debug statements

0fb34a3c 02/04/2014 06:20 PM Andreas Müller

water -> watersurface #4031

d66bafe2 02/04/2014 04:14 PM Andreas Müller

change statement to state(ment) #3864